Preparation, Checking and Post-Processing Data for PK/PD Modeling


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Documentation for package ‘NMdata’ version 0.0.11

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cbind.NMdata Basic arithmetic
cc Create character vectors without quotation marks
compareCols Compare elements in lists with aim of combining
dimnames.NMdata Basic arithmetic
dims Get dimensions of multiple objects
egdt Expand grid of data.tables
findCovs Extract columns that vary within values of other columns
findVars Extract columns that vary within values of other columns in a data.frame
flagsAssign Assign exclusion flags to a dataset based on specified table
flagsCount Create an overview of number of retained and discarded datapoints.
fnExtension Change file name extension
is.NMdata Check if an object is 'NMdata'
listMissings List rows with missing values across multiple columns
merge.NMdata Basic arithmetic
mergeCheck Merge, order, and check resulting rows and columns.
NMcheckColnames Compare $INPUT in control stream to column names in input data
NMcheckData Check data for Nonmem compatibility
NMdataConf Configure default behavior of NMdata functions
NMdataOperations Basic arithmetic
NMextractDataFile Extract the data file used in a control stream
NMextractText Versatile text extractor from Nonmem (input or output) control streams
NMgenText Generate text for INPUT and possibly DATA sections of NONMEM control streams.
NMgetSection Extract sections of Nonmem control streams
NMinfo Get metadata from an NMdata object
NMisNumeric Test if a variable can be interpreted by Nonmem
NMorderColumns Standardize column order in Nonmem input data
NMreadCsv Read input data formatted for nonmem
NMreadSection Extract sections of Nonmem control streams
NMreadTab Read an output table file from NONMEM
NMscanData Automatically find Nonmem input and output tables and organize data
NMscanInput Find and read input data and optionally translate column names according to the $INPUT section
NMscanTables Find and read all output data tables in nonmem run
NMstamp stamp a dataset or any other object
NMwriteData Write dataset for use in Nonmem (and R)
NMwriteSection Replace ($)sections of a nonmem control stream
print.summary_NMdata print method for NMdata summaries
rbind.NMdata Basic arithmetic
renameByContents Rename columns matching properties of data contents
summary.NMdata summary method for NMdata objects
t.NMdata Basic arithmetic
unNMdata Remove NMdata class and discard NMdata meta data