Visualization of T-Cell Clonal Expansion
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Documentation for package ‘APackOfTheClones’ version 0.1.3
Help Pages
| clonal_expansion_plot | Visualize T cell clonal expansion with a ball-packing plot. |
| count_clone_sizes | count the number of clonotype sizes per cell cluster in a seurat object integrated with a TCR library (will be deprecated soon) |
| integrate_tcr | Integrate a TCR library into Seurat object metadata |
| mini_clonotype_data | Artificially generated T cell receptor library |
| mini_seurat_obj | Artificially generated Seurat object |