Family Age-at-Onset Data Simulation and Penetrance Estimation
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Documentation for package ‘FamEvent’ version 3.0
Help Pages
| FamEvent-package | Family age-at-onset data simulation and penetrance estimation |
| carrierprob | Compute mutation carrier probabilities for individuals with missing gentoypes |
| fampower | Simulation-based power calculation for genetic effect |
| LSfam | Ontario Lynch Syndrom families |
| penetrance | Penetrance function and confidence intervals |
| penetrance_c | Estimating Penetrances for competing risk models and confidence intervals |
| penmodel | Fit a penetrance model |
| penmodelEM | EM algorithm for estimating the penetrance model with missing genotypes |
| penmodel_c | Fit a penetrance model for competing risks data |
| penplot | Plot penetrance functions |
| penplot_c | Plot penetrance functions from competing risk models |
| plot.penmodel | Plot method for 'penmodel' |
| plot.penmodel_c | Plot method for 'penmodel_c' |
| plot.simfam | Plot method for 'simfam' or Plot pedigrees |
| plot.simfam_c | Plot method for 'simfam_c' or Plot pedigrees |
| print.penmodel | Print method for 'penmodel'. |
| print.penmodel_c | Print method for 'penmodel_c'. |
| print.summary.penmodel | Print method for 'summary.penmodel' of a fitted penetrance model. |
| print.summary.penmodel_c | Print method for 'summary.penmodel_c' of a fitted competing risks penetrance model. |
| simfam | Generate familial time-to-event data |
| simfam_c | Generate familial competing risks data |
| summary.penmodel | Summary method for class 'penmodel' |
| summary.penmodel_c | Summary method for class 'penmodel_c' |
| summary.simfam | Summary method for 'simfam' |
| summary.simfam_c | Summary method for 'simfam_c' |