Simulations to Predict the Number of RAD and GBS Loci


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Documentation for package ‘SimRAD’ version 0.96

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SimRAD-package Simulations to predict the number of loci expected in RAD and GBS approaches.
adapt.select Function to select fragments according to the flanking restriction sites.
exclude.seqsite Function to exclude fragments containing a specified restriction site.
insilico.digest Function to digest DNA sequence using one or two restriction enzyme(s).
ref.DNAseq Function to import a reference DNA sequence from a Fasta file.
sim.DNAseq Function to simulate randomly generated DNA sequence.
SimRAD Simulations to predict the number of loci expected in RAD and GBS approaches.
size.select Function to select fragments according to their size.