88bb1db85743154e067dea263d658c1d *DESCRIPTION
025c826a417320b2bceabcefce68a38b *NAMESPACE
fc40a83a2e2bcefdf376de0bf556f510 *NEWS.md
aa5d6bba6ae0f164738ad8f6f28c6b34 *R/KW.hit.express.R
ff84fe20caa4d286aba10929eb214140 *R/alex.boxplots.R
016b4fe94e456b4a12c8db9b9c771cd5 *R/alex.pathway.R
e4312b80bc08582f6ed53b0a3d8b33ca *R/alex.prep.lsn.expr.R
00da68a95dcea4fb7abb90a4325e8ed6 *R/alex.waterfall.plot.R
fda65a39372e38b82e9458e16d5822af *R/alex.waterfall.prep.R
382fb55e9010128f58f8b2ad0174e6ae *R/clin_data.R
9d89fc51e6adc580d4cb7063e36748e3 *R/compute.gw.coordinates.R
10f363d8052818163dd2718e36f952cd *R/count.hits.R
06e58958c354e683a2820dab227c83d6 *R/default.grin.colors.R
5ebdae39d38e765484922b434df4e4c3 *R/define.grps.R
3b7f27d66b00765340fa4e2274939e62 *R/dist.lsn.R
b5a21cc30c2aa28fa136b9e86546dd41 *R/example_exon_annotation.R
48f74e185eec26ba649e9b5e44cd5834 *R/expr_data.R
1d73c0b35d685d5b18bcbfb6fc28d72e *R/find.gene.lsn.overlaps.R
bb4aeebf6846bea6863400fd6e7f323d *R/genomewide.log10q.plot.R
e5f4fccc4da777f3c6749f3bcef8326d *R/genomewide.lsn.plot.R
23a5799c09e7700fb6abedb336a2306f *R/get.chrom.length.R
74e881199dd14bbf692a053a4a6d3c05 *R/get.ensembl.annotation.R
9c2a4a5d7c936928f1603bd7c1fa17a2 *R/globals.R
cefbaf0133862d560b7b1e25fc78b2d0 *R/grin.assoc.expr.outcome.R
db886901e871fb444a9d49d69a62f238 *R/grin.assoc.lsn.outcome.R
4fd9d3b9f50e0db51bb89f585fe76690 *R/grin.barplt.R
59d2ee148281b58dbdfdf88d1c9e43cd *R/grin.logRank.R
e86d1c79e2f34ffe7b139d8bc800fc57 *R/grin.lsn.boundaries.R
4bbacd8e858b09993c70a8e330c255d4 *R/grin.oncoprint.mtx.R
bedb7fe0dc55f3fbd01bf9b7d18fec80 *R/grin.results.R
3de7203abfc378febe7575d8e33bbccd *R/grin.stats.R
8433f4061f7a73606d4957317e53bab1 *R/grin.stats.lsn.plot.R
d12181264bd4022dd957e19da51ab0be *R/grin2.annotation.resources.R
605eca2371e6308f5cf70baed427182b *R/grin2.retrieve.annotation.resource.R
79f3bb2414a80b44bf8c23c589a49b39 *R/hg38_chrom_size.R
11fbcdcdaf06e4852c3fe2b12fd0eeaf *R/hg38_cytoband.R
e885f98787070ab9a5d0cb0b984494d0 *R/hg38_exon_chrom_size.R
f274e5fdd0e8cf23681a31c4ab3e67f4 *R/hg38_gene_annotation.R
037a9c63bbb62949054426f2bc68835f *R/lesion_data.R
5baa245d1e2b25190408aa03129ee638 *R/lsn.transcripts.plot.R
392e9d27bcc7aaafe70ead5a925a1adb *R/onco.print.alter.func.R
ded85de7a226cbf8c0924b71b7c705f1 *R/onco.print.props.R
ed5cf5310340dc0aaaa747dedf8e5fce *R/oncoprint.legend.R
834bfe097751eb767c88f33a7194eb97 *R/one.KW.pvalue.R
c7568c5ba491289d58e5ff61183b4201 *R/order.index.gene.data.R
117833977616ab138bf8820d4640112c *R/order.index.lsn.data.R
47a7230bedbdf935096bd47665dcba1b *R/p.order.R
dcd8deb667ee994d98b4d8da43a709e4 *R/pathways.R
877739fc183a55bbc6a31fe4c0442e6d *R/pbc.R
f9b4a8ed44eeec8bec6f2ba656a7e09e *R/pc06.fdr.R
178ec3aa63a1ed6160c586d215f14553 *R/prep.binary.lsn.mtx.R
7df356f94655915252fe115ac106898a *R/prep.gene.lsn.data.R
a29340507bac16ab32e29e23d4ceaeae *R/prep.lsn.type.matrix.R
0a323e9eb8e196afe9354903dee923a6 *R/prob.hits.R
7491143c8c3bbd28bb6144eaaff7b68e *R/row.prob.subj.hit.R
ca4d2a7773676212f598fa1492b7487b *R/row.stats.by.group.R
cab74c11278eda4a830bee38aa681ff5 *R/rpbc.R
e4f2eac6c0568afcb6fffc0a85ab2fd7 *R/stat.by.group.R
31064b4d0d81c2167095db361031e9ef *R/top.alex.waterfall.plots.R
e7c59a2ff38cb59aef941256af836f1b *R/write.grin.xlsx.R
ba582b375e5afde780e991c9b7711c6a *build/partial.rdb
1491b63e9bd89e719088be3ff03e5026 *build/vignette.rds
eed280a6308b53fb42c19f87dc4058a7 *data/clin_data.rda
ecbc1f75a0aa512dce9544a20567466b *data/example_exon_annotation.rda
a327c5759838b0242d13f17cb42c2975 *data/expr_data.rda
5fa57be00bdef9967fb1e9cb69236c9e *data/grin.results.rda
ddb9c46595209da1089dce6254dbe133 *data/hg38_chrom_size.rda
017cc38c7a8e412818d8eddab65c13a0 *data/hg38_cytoband.rda
f05a260436ef9ec9e9a3a3cc7a74f9d6 *data/hg38_exon_chrom_size.rda
9f86b0a8d27bed79117ebe07c1a9f775 *data/hg38_gene_annotation.rda
484edf00c5aafcff13569608d14ced5c *data/lesion_data.rda
f277221fac16994a99737669aa894162 *data/pathways.rda
abb088f03fe1d2f44a5af31a18acc1c7 *inst/doc/GRIN2.R
3dafd98656eac0d2fbcc48cfbd64f64b *inst/doc/GRIN2.Rmd
c5fa04ef80d9c13e5f9bf22cad244982 *inst/doc/GRIN2.html
2313f9572150a8b877b89ffa133f5324 *man/KW.hit.express.Rd
64f581a2cb8cf41338b3e4eb366dbe0a *man/alex.boxplots.Rd
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baf4ae1d0496f54d936bb25848fe94db *man/alex.prep.lsn.expr.Rd
22b092b8e054b5c3892d46ba480ef4f0 *man/alex.waterfall.plot.Rd
37ff521ef6b229e9e2e933856ff720a9 *man/alex.waterfall.prep.Rd
e68d9f1f17b92e0dde0198b068a7dafb *man/clin_data.Rd
15fb3b30db9cf6be2eab40295237524b *man/compute.gw.coordinates.Rd
93f2e391ff4fedec6470e6a59461b7c0 *man/count.hits.Rd
8302653c0460e70a461756cf259d9136 *man/default.grin.colors.Rd
54988e032bd9cf4e9407fb822cd55d08 *man/example_exon_annotation.Rd
cfd6102db5538dd0774e2856625829d4 *man/expr_data.Rd
cdb78943d6856cd150176bbe7e603ea9 *man/find.gene.lsn.overlaps.Rd
c406d301b1df6c56930b9b007ef0f7c4 *man/genomewide.log10q.plot.Rd
e0ff9571ad21d2f26e83147b48778719 *man/genomewide.lsn.plot.Rd
14b4238ccd5d9b979b4ac9510b749e7c *man/get.chrom.length.Rd
e2d521131b58dfa3efba85c616f95c03 *man/get.ensembl.annotation.Rd
d13022abf557d88ec816f087a40ae88d *man/grin.assoc.expr.outcome.Rd
e53399a99b7508be692d89dc1dedd6a9 *man/grin.assoc.lsn.outcome.Rd
9ec5e379aca1970eff0c55670a211edd *man/grin.barplt.Rd
92905e89ac14e01715f07b952b9bbe81 *man/grin.logRank.Rd
90398feb90ff0dd3ba91e8096bff4947 *man/grin.lsn.boundaries.Rd
78d5a6c4c01e1119cfbc4ff7ead06873 *man/grin.oncoprint.mtx.Rd
aadbf0db864c06bdf2ecc62d84a3a8f6 *man/grin.results.Rd
fcd19f65e9f7c68dfb8372535c70a59b *man/grin.stats.Rd
b0d4ef75af9908d72b5f1fd94c55e1fb *man/grin.stats.lsn.plot.Rd
ae799d8279919471810df796e200c019 *man/hg38_chrom_size.Rd
c14dab4b31fae018eead072165411ea6 *man/hg38_cytoband.Rd
4e5c4b3e4fdf0ce4e79d35ccc0f21b9e *man/hg38_exon_chrom_size.Rd
b39927c9b2ee4380d67e69fd383a3e2f *man/hg38_gene_annotation.Rd
e6403670e271c3fab75ffdb920ffa2d4 *man/lesion_data.Rd
a11e9b2c197c20b69f9a87ebb65adb36 *man/lsn.transcripts.plot.Rd
233d94aa2573c1f29561e9f69db53256 *man/onco.print.props.Rd
f758cfb5a79a3dff6ba47ad7d8b6288c *man/order.index.gene.data.Rd
9d8969a642ead4a22aba844f58d4fbdb *man/order.index.lsn.data.Rd
f892d2b81b760a170b227b74f1170bd8 *man/pathways.Rd
2210ce888e5a45b1edca9f9d99e6f733 *man/prep.binary.lsn.mtx.Rd
985f7b0091c59f38c99b0a4bf8a83ace *man/prep.gene.lsn.data.Rd
a831be3c9c09a1364b784f18c63e88ae *man/prep.lsn.type.matrix.Rd
99cd3e6339052b7eb9acf4232eb6f138 *man/prob.hits.Rd
b6d0343af6de8a4b4540d015ca4a20f7 *man/top.alex.waterfall.plots.Rd
14b992d946d0a5e93701bfd216e531f6 *man/write.grin.xlsx.Rd
3dafd98656eac0d2fbcc48cfbd64f64b *vignettes/GRIN2.Rmd
