Package: MetPhenoR
Title: A Transparent Analysis Pipeline for Mammalian Metabolic
        Phenotype Microarray Data
Version: 1.3
Authors@R: 
  c(person(given="Katja",family= "Danielzik", email="katja.danielzik@uni-due.de", 
           role = c("aut", "cre", "cph"),
           comment=c(ORCID="0009-0007-5021-6212")),
    person(given="Willson",family = "Tjioe",
            role = "aut",
            comment=c(ORCID="0009-0003-3530-1727")),
    person(given="Julia", family="Asche",
            role = "ctb"),
    person(given="Johann",family="Matschke",
            role="ctb",
           comment=c(ORCID="0000-0003-4878-8741")),
    person(given="Daniel",family="Hoffmann",
            role="ctb",
           comment=c(ORCID="0000-0003-2973-7869")))
Description: Provides a transparent, end-to-end workflow for analyzing high-throughput 
  phenotype microarray data in mammalian cell cultures. It begins with automated 
  reading and noise correction, followed by comprehensive quality control via 
  visual diagnostics, i.e. detecting missing wells, anomalous curve shapes and 
  variance. Area under Curve is computed as a summary metric. 
  Biological annotations (custom or in-built for PM-M01,PM-M02, PM-M11 - PM-M14) enable group-level 
  comparisons.
License: GPL (>= 3)
Encoding: UTF-8
Depends: R (>= 4.5.0)
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)
Imports: readr, dplyr, magrittr, tidyselect, ggplot2, tidyr, stringr,
        purrr, tidyselect, scales, stats, patchwork, readr, ggforce,
        rlang
Config/testthat/edition: 3
LazyData: true
VignetteBuilder: knitr
Config/roxygen2/version: 8.1.0
URL: https://github.com/KatjaDanielzik/MetPhenoR
BugReports: https://github.com/KatjaDanielzik/MetPhenoR/issues
NeedsCompilation: no
Packaged: 2026-10-26 18:46:40 UTC; katja
Author: Katja Danielzik [aut, cre, cph] (ORCID:
    <https://orcid.org/0009-0007-5021-6212>),
  Willson Tjioe [aut] (ORCID: <https://orcid.org/0009-0003-3530-1727>),
  Julia Asche [ctb],
  Johann Matschke [ctb] (ORCID: <https://orcid.org/0000-0003-4878-8741>),
  Daniel Hoffmann [ctb] (ORCID: <https://orcid.org/0000-0003-2973-7869>)
Maintainer: Katja Danielzik <katja.danielzik@uni-due.de>
Repository: CRAN
Date/Publication: 2026-11-11 21:10:08 UTC
