Pharmacokinetic Bioanalysis Experiments Design and Exploration


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Documentation for package ‘PKbioanalysis’ version 0.1.0

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.add_every_n Interject dataframe every Nth position
.get_plates_db Get all plates in the database
.injecList injection List Object
.is_registered Check if a plate is registered
.plate_id Extract the plate id from a plate
.plate_subid Extract the subid from a plate
add_blank Add blank to the plate Can be either double blank (DB), CS0IS+ or CS1IS-
add_cs_curve Add calibration curve to the plate
add_DB Add double blank (DB) to a plate
add_qcs Add quality control samples to the plate
add_samples Add unknown samples to a plate
add_samples_c Cartesian product of sample factors to a plate
add_suitability Add suitability sample to the plate
build_injec_seq Create Injection Sequence
combine_injec_lists Create Sample List with rigorous design
combine_plates Combine plates in MultiPlate object
download_sample_list Download sample list from database to local spreadsheet
generate_96 Generate 96 Plate Generate a typical 96 well plate. User need to specify the empty rows which a going to be used across the experiment.
make_calibration_study Create a calibration study with calibration standards and QCs
make_metabolic_study Create a metabolic study layout
plate_app bioanalytic_app
plate_metadata Set plate description
plot.PlateObj Plotting 96 well plate
register_plate Register a plate This will save the plate to the database
write_injec_seq Export injection sequence to vendor specific format