Formatted_MUTimpactMatrix
                        The output of 'mts_formatMatrix()' function for
                        an example dataset.
MUT_impactMatrix        Example mutation impact matrix
depMapCRISPRscores_subset
                        Example CRISPR score input matrix
depMapMUT_small         Example mutation data input matrix
depMapMUT_subset        Example mutation data input matrix
depMapTissue_subset     Example tissue data input matrix
depMapXPR_small         Example gene expression input matrix
depMapXPR_subset        Example gene expression input matrix
mRes                    Example results for the 'mts_Mutation'
                        function.
mixModelClusters_depMapCRISPR
                        Clusters of samples (cell lines) from the
                        'mts_mixModelCluster' function for a small
                        dataset of DepMap CRISPR scores.
mixModelClusters_depMapXPR
                        Clusters output from the 'mts_mixModelCluster'
                        function for a toy DepMap expression dataset.
mixModelClusters_vignette
                        Clusters output from the 'mts_mixModelCluster'
                        function for a DepMap expression data that is
                        required for the vignette.
mts_Crispr              Investigate Gene Dependency Relationships with
                        CRISPR and gene expression data
mts_CrisprTS            Predict tissue-specific gene dependency
                        relationships, evaluating differences in CRISPR
                        scores for gene A between expression clusters
                        for gene B (SynLeGG).
mts_GeneDepCrispr       CRISPR and gene expression gene-dependency
                        prediction (SynLeGG)
mts_GeneDepID           CRISPR vs gene expression induced dependency
                        pipeline (SynLeGG)
mts_GeneDepMutation     Mutation vs gene expression gene-dependency
                        prediction
mts_InducedDependency   Predict 'induced dependency' relationships,
                        evaluating differences in CRISPR scores for
                        gene A between expression clusters for gene B
mts_Mutation            Integrate gene cluster assignments with
                        mutation data
mts_clusterAvg          Determine average CRISPR score values for gene
                        expression clusters
mts_crisprPartition     Partition CRISPR gene effect scores
mts_formatMatrix        Format a matrix into a list of data frames that
                        capture gene functional status
mts_genepairsChunkGeneration
                        Generate '.RData' files containing subsets of
                        gene pairs
mts_mixModelCluster     Cluster continuous data with Gaussian Mixture
                        Modelling
mts_mixModelCluster_XPR
                        Cluster gene expression data with Gaussian
                        Mixture Modelling
mts_omics               Predict synthetic lethality and other
                        dependency relationships from mutually
                        exclusive loss of function patterns
mts_pairwiseExpressionPlot
                        Visualise pairwise gene expression data with
                        MultiSEp cluster boundaries.
mts_patternDetection    Predict Gene Dependency Relationship Patterns,
                        including Synthetic Lethality
mts_plotCRISPRGeneCluster
                        Visualise CRISPR and expression data (SynLeGG
                        methods).
mts_plotClusterDistribution
                        Visualise samples and pairwise gene expression
                        clusters
mts_plotMutation        Visualise clusters for one gene with the
                        mutation status of another gene.
mts_targetCoverageFromMutations
                        Predict the therapeutic population coverage
                        achieved by inhibition of a candidate target
                        gene
mts_tests               Unit Tests for the MultiSEp package
multisepCrisprList      Example Multisep t-test CRISPR vs XPR results
                        object.
multisepList            Example results from mts_clusterAvg()
