NASA's Global Ecosystem Dynamics Investigation (GEDI) Data Visualization and Processing


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Documentation for package ‘rGEDI’ version 0.6.0

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rGEDI-package rGEDI: An R Package for NASA's Global Ecosystem Dynamics Investigation (GEDI) Data Visualizing and Processing.

-- A --

addEEImage Add an Earth Engine image to a Leaflet map
aggregateLevel3 Aggregate a GEDI Level 3 raster
aggregateLevel4B Aggregate a GEDI Level 4B raster
aspect Earth Engine terrain aspect

-- B --

build_ee_forest Train a regression forest in Earth Engine

-- C --

clip Clip GEDI data with a common interface
clip-method Clip GEDI data with a common interface
clipLevel1B Clip GEDI Level1B data by Coordinates
clipLevel1BGeo Clip GEDI Full Waveform Geolocations by Coordinates
clipLevel1BGeoGeometry Clip GEDI Full Waveform Geolocations by geometry
clipLevel1BGeometry Clip GEDI Level1B data by geometry
clipLevel2A Clip GEDI Level2A data by Coordinates
clipLevel2AGeometry Clip GEDI Level2A data by geometry
clipLevel2AM Clip GEDI Elevation and Height Metrics by Coordinates
clipLevel2AMGeometry Clip GEDI Elevation and Height Metrics by Coordinates
clipLevel2B Clip GEDI Level2B data by Coordinates
clipLevel2BGeometry Clip GEDI Level2B data by geometry
clipLevel2BPAIProfile Clip GEDI Plant Area Index profile by Coordinates
clipLevel2BPAIProfileGeometry Clip GEDI Plant Area Index profile by geometry
clipLevel2BPAVDProfile Clip GEDI Plant Area Volume Density profile by Coordinates
clipLevel2BPAVDProfileGeometry Clip GEDI Plant Area Volume Density profile by geometry
clipLevel2BVPM Clip GEDI Canopy Cover and Vertical Profile Metrics by Coordinates
clipLevel2BVPMGeometry Clip GEDI Canopy Cover and Vertical Profile Metrics by geometry
clipLevel3 Clip a GEDI Level 3 raster
clipLevel4A Clip GEDI Level 4A data by an extent
clipLevel4AGeometry Clip GEDI Level 4A data by polygons
clipLevel4B Clip a GEDI Level 4B raster
close-method Safely closes the 'gedi.level1b'
close.gedi.cloud_h5 Close a cloud HDF5 connection

-- D --

downloadGEDI Download GEDI data

-- E --

earthdata_login Authenticate with NASA Earthdata
earthdata_s3_credentials Configure temporary NASA Earthdata S3 credentials
ee_build_AlphaEarth_embedding_terrain_stack Build an AlphaEarth and terrain predictor stack
ee_build_hls_s1c_terrain_stack Build an HLS and terrain predictor stack in Earth Engine
ee_check_task_status Check an Earth Engine task
ee_image_to_drive Export an Earth Engine image to Google Drive
ee_initialize Initialize Google Earth Engine
ee_rect_to_sf Convert an Earth Engine rectangle to 'sf'
extractEE Extract Earth Engine image values at GEDI footprints
extractGEDIAncillary Extract Earth Engine image values at GEDI footprints
extractLevel3 Extract GEDI Level 3 raster values
extractLevel4B Extract GEDI Level 4B raster values
ext_to_ee Convert an extent to an Earth Engine geometry

-- F --

fit_metrics Model fit metrics
fit_model Fit a GEDI statistical or random-forest model

-- G --

gedi.fullwaveform Class for GEDI level1B Full Waveform
gedi.fullwaveform-class Class for GEDI level1B Full Waveform
gedi.level1b Class for GEDI level1B
gedi.level1b-class Class for GEDI level1B
gedi.level2a Class for GEDI level2A
gedi.level2a-class Class for GEDI level2A
gedi.level2b Class for GEDI level2B
gedi.level2b-class Class for GEDI level2B
gedi.level4a Class for GEDI Level 4A footprint biomass data
gedi.level4a-class Class for GEDI Level 4A footprint biomass data
gediDownload Download GEDI data
gediEE Open a GEDI product in Google Earth Engine
gedifinder Find GEDI granules through NASA CMR
gediWFMetrics Compute metrics from GEDI or simulated full waveforms
gediWFSimulator Simulate GEDI-like full waveforms from airborne laser scanning data
geomSampling GEDI polygon-stratified sampling specification
getGEDITrack Extract a GEDI reference ground track
getLevel1BGeo Get GEDI Full Waveform Geolocations (GEDI Level1B)
getLevel1BWF Get GEDI Pulse Full Waveform (GEDI Level1B)
getLevel2AM Get GEDI Elevation and Height Metrics (GEDI Level2A)
getLevel2BPAIProfile Get GEDI Plant Area Index (PAI) Profile (GEDI Level2B)
getLevel2BPAVDProfile Get GEDI Plant Area Volume Density (PAVD) Index Profile (GEDI Level2B)
getLevel2BVPM Get GEDI Canopy Cover and Vertical Profile Metrics (GEDI Level2B)
getLevel4A Extract GEDI Level 4A footprint metrics
getTileUrl Get an Earth Engine image tile URL
get_catalog_id Return an Earth Engine catalog ID
glcmTexture Earth Engine gray-level co-occurrence textures
gridSampling GEDI grid-stratified sampling specification
gridStatsLevel2AM Compute Grids with Descriptive Statistics of GEDI derived Elevation and Height Metrics (Level2A)
gridStatsLevel2BVPM Compute Grids with Descriptive Statistics of GEDI derived Canopy Cover and Vertical Profile Metrics (Level2B)
gridStatsLevel4A Grid GEDI Level 4A footprint metrics

-- M --

map_create Apply an Earth Engine model to a predictor image
map_download Download an Earth Engine image
map_view Display Earth Engine layers in Leaflet
mosaicLevel3 Mosaic GEDI Level 3 rasters
mosaicLevel4B Mosaic GEDI Level 4B rasters

-- O --

openGEDI Open GEDI data from local storage or Earthdata Cloud

-- P --

plot-method Plot GEDI* object
plot.gedi_var_selection Plot GEDI variable selection results
plotLevel3 Plot GEDI Level 3 metrics
plotLevel4A Plot GEDI Level 4A footprint biomass
plotLevel4B Plot GEDI Level 4B metrics
plotPAIProfile Plot GEDI Plant Area Index (PAI) Profile
plotPAVDProfile Plot GEDI Plant Area Volume Density Profile
plotWFMetrics GEDI full waveform plot with metrics
plot_gedi_orbit_animation Animate a GEDI ground track around the Earth
polyStatsLevel2AM Compute descriptive statistics of GEDI Elevation and Height Metrics
polyStatsLevel2BVPM Compute descriptive statistics of GEDI Canopy Cover and Vertical Profile Metrics
polyStatsLevel3 Polygon summaries of GEDI Level 3 metrics
polyStatsLevel4A Polygon statistics for GEDI Level 4A footprints
polyStatsLevel4B Polygon summaries of GEDI Level 4B metrics
predictGEDI Predict GEDI footprint values
predictGEDIH5 Predict values and write them to HDF5
projectLevel3 Project a GEDI Level 3 raster
projectLevel4B Project a GEDI Level 4B raster

-- R --

randomSampling GEDI random sampling specification
rasterizeGEDI Rasterize GEDI footprint data
rasterizeLevel4A Rasterize GEDI Level 4A footprints
rasterSampling GEDI raster-stratified sampling specification
readGEDICloud Open a GEDI HDF5 granule through Earthaccess
readLevel1B Read GEDI Level1B data (Geolocated Waveforms)
readLevel2A Read GEDI Level2A data (Basic Full Waveform derived Metrics)
readLevel2B Read GEDI Level2B data (Biophysical Variables)
readLevel3 Read GEDI Level 3 gridded metrics
readLevel4A Read a GEDI Level 4A granule
readLevel4B Read GEDI Level 4B gridded biomass
resampleLevel3 Resample a GEDI Level 3 raster
resampleLevel4B Resample a GEDI Level 4B raster
rGEDI_configure Configure optional rGEDI cloud and Earth Engine support

-- S --

sampleGEDI Sample GEDI footprint observations
search_datasets Search the GEDI datasets available in Earth Engine
slope Earth Engine terrain slope
spacedSampling GEDI minimum-distance sampling specification
stratifiedSampling GEDI attribute-stratified sampling specification

-- T --

to_vect Convert GEDI footprints to a spatial vector

-- V --

varSel Select predictor variables for a GEDI model
vect_as_ee Convert a vector object to an Earth Engine feature collection