# Identification of Somatic Mutation-Driven Immune Cells

## Documentation for package ‘SMDIC’ version 0.1.5

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

SMDIC-package | Identification of somatic mutation-driven immune cells
cell24 | A data.frame of 24 immune cells name from Bindea et al
cell64 | A data.frame of 64 immune cells name from xCell method
cellmatrix | envData
envData | envData
exp.example | envData
exp2cell | exp2cell
gene2cellsummary | gene2cellsummary
GetExampleData | Get the example data
heatmapcell | heatmapcell
immunelist | A large list of 24 immune cells type-specific gene signatures from Bindea et al
maf2matrix | maf2matrix
mutcell | envData
mutcellsummary | mutcellsummary
mutcorcell | mutcorcell
mutmatrix | envData
plotCoocMutex | plotCoocMutex
plotwaterfall | plotwaterfall
survcell | survcell
xCell.data | xCell datasets