AutoReplicationSettings
                        Create auto replication settings.
Bioavailability         Create a bioavailability for the specified
                        compartment.
CampsisModel            Create a new Campsis model.
CodeRecords             Create a list of code records.
Comment                 Create a new comment.
Compartment             Create a compartment.
Compartments            Create a list of compartments
Equation                Create a new equation.
ErrorRecord             Create ERROR code record.
IfStatement             Create a new IF-statement.
InfusionDuration        Create an infusion duration.
InfusionRate            Create an infusion rate.
InitialCondition        Create an initial condition.
JSONElement             Instantiate a JSON element.
LagTime                 Create a lag time for the specified
                        compartment.
LineBreak               Create a new line break.
MainRecord              Create MAIN code record.
ManualReplicationSettings
                        Create manual replication settings.
ModelStatements         Create an empty list of model statements.
Ode                     Create a new ordinary differential equation
                        (ODE).
OdeRecord               Create ODE code record.
Omega                   Create an OMEGA parameter.
OmegaBlock              Create a block of OMEGA's.
OmegaBlocks             Create a list of OMEGA blocks.
Parameters              Create a list of parameters.
Pattern                 Create a pattern.
Position                Element position in list.
Sigma                   Create a SIGMA parameter.
Theta                   Create a THETA parameter.
UnknownStatement        Create a new ordinary differential equation
                        (ODE).
VariablePattern         Create a variable pattern.
add                     Add element to list.
add_rse                 Add relative standard error (RSE) to the
                        specified parameter.
add_suffix              Generic function to add a suffix to various
                        objects like parameters, code records,
                        compartment names or a model (all previous
                        objects at the same time). This makes it an
                        extremely powerful function to combine 2 models
                        or more (using function 'add'), that have
                        similar equation, parameter or compartment
                        names.
as.data.frame           As data frame method.
assert_single_character_string
                        Assert the given character vector is a single
                        character string.
auto_detect_nonmem      Auto-detect special variables from NONMEM as
                        compartment properties. Bioavailabilities,
                        infusion durations/rates and lag times will be
                        automatically detected.
auto_replication_settings-class
                        Auto replication settings class.
campsis_model-class     Campsis model class.
code_record-class       Code record class. See this code record as an
                        abstract class. 2 implementations are possible:
                        - properties record (lag, duration, rate &
                        bioavailability properties) - statements record
                        (main, ode & error records)
comment-class           Comment class. A statement starting with #.
compartment-class       Compartment class.
compartment_bioavailability-class
                        Compartment bioavailability class.
compartment_infusion_duration-class
                        Compartment infusion duration class.
compartment_infusion_rate-class
                        Compartment infusion rate class.
compartment_initial_condition-class
                        Compartment initial condition class.
compartment_lag_time-class
                        Compartment lag time class.
compartment_properties-class
                        Compartment properties class.
compartment_property-class
                        Compartment property class.
compartments-class      Compartments class.
default                 Get default element from list.
delete                  Delete an element from this list.
disable                 Disable.
double_array_parameter-class
                        Double-array parameter class. This parameter
                        has 2 indexes.  It can thus be used to define
                        correlations between parameters.
duration_record-class   (Infusion)-duration record class.
equation-class          Equation class. Any statement in the form A =
                        B.
error_record-class      Error record class.
export                  Export function.
export_to_json          Export the given object to a JSON object, ready
                        to be written to files.
export_type-class       Export type class.
extract_lhs             Extract left-hand-side expression.
extract_rhs             Extract right-hand-side expression.
extract_text_between_brackets
                        Extract text between brackets.
f_record-class          Bioavailability record class.
find                    Find an element in list.
fix_omega               Fix omega matrix for SAME OMEGA parameters that
                        have NA values due to imperfections in Pharmpy
                        import.
get_by_index            Get element by index.
get_by_name             Get an element from a list by name. Never
                        return more than 1 element.
get_campsismod_option   Get Campsismod option logic.
get_compartment_index   Get the compartment index for the specified
                        compartment name.
get_name                Get element name.
get_name_in_model       Get the name of the given parameter in the
                        Campsis model.
get_names               Get element names from list.
get_nonmem_name         Get NONMEM name.
get_omega_block         Get the right block of OMEGA's.
get_omega_indexes       Get the indexes of the omegas.
get_prefix              Get prefix.
get_record_delimiter    Get record delimiter.
get_record_name         Get record name.
get_uncertainty         Get uncertainty on the parameters.
get_var_cov             Get variance-covariance matrix.
has_comment             Check if string contains Campsis-style
                        comments.
has_exact_method        Has exact method allows to check the existence
                        of a S4 method in Campsis based on its
                        signature.
has_off_diagonal_omegas
                        Has off-diagonal omegas.
if_statement-class      If-statement class. Any statement in the form
                        if (condition) A = B.
index_of                Get the index of an element in list.
init_record-class       Init record class.
is_comment              Check if string is a Campsis comment (i.e. not
                        an equation).
is_diag                 Is diagonal.
is_empty_line           Check if string is an empty line.
is_equation             Say if line in record is an equation not.
is_if_statement         Say if line in record is an IF-statement.
is_matrix_positive_definite
                        Is matrix positive definite. Same check as
                        'mvtnorm' does.
is_ode                  Say if line(s) in record is/are ODE or not.
is_record_delimiter     Is record delimiter. A record delimiter is any
                        line starting with [...].
is_strict_record_delimiter
                        Is strict record delimiter. A strict record
                        delimiter is any line starting with [...] and
                        followed by nothing but spaces or a possible
                        comment.
json_element-class      JSON element class.
json_to_parameter       JSON to Campsis parameter.
lag_record-class        Lag record class.
line_break-class        Line-break class. A linebreak in the model.
load_from_json          Fill-in S4 object from the JSON content.
main_record-class       Main record class.
manual_replication_settings-class
                        Manual replication settings class.
map_json_properties_to_s4_slots
                        Map JSON properties to S4 slots.
map_s4_slots_to_json_properties
                        Map S4 slots to JSON properties.
max_index               Max index.
min_index               Min index.
model_statement-class   Model statement class. Any statement in a code
                        record.
model_statements-class
                        Model statements class. A list of statements.
model_suite             Campsis model suite.
move                    Move element 'x' from object to a certain
                        place.
mrgsolve_block          Convert code record for mrgsolve.
mrgsolve_capture        Get the CAPTURE block for mrgsolve.
mrgsolve_compartment    Get the compartment block for mrgsolve.
mrgsolve_main           Get the MAIN block for mrgsolve.
mrgsolve_matrix         Get the OMEGA/SIGMA matrix for mrgsolve.
mrgsolve_ode            Get the ODE block for mrgsolve.
mrgsolve_param          Get the parameters block for mrgsolve.
mrgsolve_table          Get the TABLE block for mrgsolve.
mrgsolve_type-class     Mrgsolve export type class.
ode-class               ODE class. Any statement in the form
                        d/dt(A_CMT) = B.
ode_record-class        ODE record class.
omega-class             Omega parameter class.
parameter-class         Parameter class. Any parameter in a
                        pharmacometric model.
parameters-class        Parameters class.
parse_if_statement      Parse IF-statement. Assumption:
                        'is_if_statement' method already called and
                        returned TRUE.
parse_statements        Parse statements code and return Campsis
                        statements.
pattern-class           Pattern class.
pmx_element-class       PMX element class.
pmx_position-class      PMX position class.
pmx_position_by_element-class
                        PMX position by element class.
pmx_position_by_index-class
                        PMX position by index class.
process_extra_arg       Process extra arguments.
properties_record-class
                        Properties record class.
rate_record-class       (Infusion)-rate record class.
read                    Generic read method to read data from a file or
                        a folder.
read.allparameters      Read all parameters files at once.
read.campsis            Read a Campsis model.
read.model              Read model file.
read.parameters         Read parameters file.
read.varcov             Read variance-covariance file.
replace                 Replace element by another in list.
replace_all             Replace all occurrences in object.
replicate               Replicate generic object.
replicated_campsis_model-class
                        Replicated Campsis model class.
replication_settings-class
                        Replication settings interface.
rxode_code              Get code for rxode2
rxode_matrix            Get the OMEGA/SIGMA matrix for rxode2.
rxode_params            Get the parameters vector for rxode2.
rxode_type-class        RxODE/rxode2 export type class.
select                  Get a subset of an object.
set_min_max             Set the minimum and maximum value on a model
                        parameter.
shift_omega_indexes     Shift OMEGA indexes.
sigma-class             Sigma parameter class.
single_array_parameter-class
                        Single-array parameter class. This parameter
                        has a single index value.
sort                    Sort the specified list.
standardise             Standardise.
statements_record-class
                        Statements record class.
theta-class             Theta parameter class.
to_string               to_string generic method.
trim                    Trim character vector. Remove all leading and
                        trailing spaces.
unknown_statement-class
                        Unknown statement class. Any statement not
                        recognized by campsismod.
update_compartments     Update compartments list from the persisted
                        records. Exported especially for package
                        'campsistrans'. However, this method should not
                        be called.
variable_pattern-class
                        Variable pattern class.
write                   Write generic object to files.
write_parameters        Write subset of parameters (theta, omega or
                        sigma).
write_varcov            Write variance-covariance matrix.
