Interface to the Fish Tree of Life API
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Documentation for package ‘fishtree’ version 0.4.0
Help Pages
| fishtree_alignment | Get aligned sequences from the Fish Tree of Life |
| fishtree_cache_clear | Manage the Fish Tree of Life download cache |
| fishtree_cache_info | Manage the Fish Tree of Life download cache |
| fishtree_complete_phylogeny | Get complete (stochastically-resolved) phylogenies from the Fish Tree of Life |
| fishtree_phylogeny | Get a phylogeny from the Fish Tree of Life |
| fishtree_release | Get the details of a Fish Tree of Life release |
| fishtree_releases | List releases on the Fish Tree of Life |
| fishtree_rogues | Get rogue taxa that break the monophyly of defined taxa |
| fishtree_taxonomy | Get taxonomies and other data from the Fish Tree of Life |
| fishtree_tip_rates | Get tip rates for the Fish Tree of Life |