Package: geneviewer
Type: Package
Title: Gene Cluster Visualizations
Version: 0.2.0
Authors@R: c(person(given = "Niels",
                  family = "van der Velden",
                  role = c("aut", "cre"),
                  email = "n.s.j.vandervelden@gmail.com"),
             person("Mike", "Bostock", role = c("ctb", "cph"),
                    comment = "Bundled D3 library"),
             person("Eli", "Grey", role = c("ctb", "cph"),
                    comment = "Bundled FileSaver.js library"))
Maintainer: Niels van der Velden <n.s.j.vandervelden@gmail.com>
Description: Provides tools for plotting gene clusters and transcripts by 
  importing data from GenBank, FASTA, and GFF files. It performs global 
  pairwise protein alignments and 'MUMmer' alignments [Needleman and Wunsch (1970)
  <doi:10.1016/0022-2836(70)90057-4>; Delcher et al. (1999)
  <doi:10.1093/nar/27.11.2369>] and displays results on gene arrow maps.
  Extensive customization options are available, including legends, labels,
  annotations, scales, colors, tooltips, and more.
License: MIT + file LICENSE
SystemRequirements: MUMmer (optional, used by mummer_alignment())
Encoding: UTF-8
LazyData: true
Language: en-US
URL: https://github.com/nvelden/geneviewer
BugReports: https://github.com/nvelden/geneviewer/issues
Depends: R (>= 3.5.0)
Imports: htmlwidgets, fontawesome, magrittr, dplyr (>= 1.0.0), rlang,
        grDevices, stats, tools, utils
Suggests: shiny, pwalign, Biostrings, chromote, htmltools, jsonlite,
        testthat (>= 3.2.0)
Config/testthat/edition: 3
Config/Needs/website: knitr, rmarkdown, tidyr, biomaRt
Config/roxygen2/version: 8.1.1
NeedsCompilation: no
Packaged: 2026-11-03 14:22:56 UTC; nielsvandervelden
Author: Niels van der Velden [aut, cre],
  Mike Bostock [ctb, cph] (Bundled D3 library),
  Eli Grey [ctb, cph] (Bundled FileSaver.js library)
Repository: CRAN
Date/Publication: 2026-11-03 17:20:19 UTC
Built: R 4.5.2; ; 2026-11-03 19:54:48 UTC; unix
