Visualizing Pedigrees with 'ggplot2' and 'plotly'
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Documentation for package ‘ggpedigree’ version 0.8.0
Help Pages
| ASOIAF | A pedigree of ice and fire |
| buildPlotConfig | build Config |
| calculateConnections | Calculate connections for a pedigree dataset |
| calculateCoordinates | Calculate coordinates for plotting individuals in a pedigree |
| computeDistance | Compute distance between two points |
| countOffspring | Count offspring of each individual |
| countSiblings | Count siblings of each individual |
| generateSpouseList | Generate a spouselist matrix |
| getDefaultPlotConfig | Shared Default Plotting Configuration |
| ggPedigree | Plot a custom pedigree diagram |
| ggpedigree | Plot a custom pedigree diagram |
| ggPedigreeInteractive | Interactive pedigree plot (Plotly wrapper around ggPedigree) |
| ggpedigreeInteractive | Interactive pedigree plot (Plotly wrapper around ggPedigree) |
| ggpedigreeinteractive | Interactive pedigree plot (Plotly wrapper around ggPedigree) |
| ggPhenotypeByDegree | Plot correlation of genetic relatedness by phenotype |
| ggRelatednessMatrix | Plot a relatedness matrix as a heatmap (ggpedigree style) |
| ggrelatednessmatrix | Plot a relatedness matrix as a heatmap (ggpedigree style) |
| plotPedigree | plotPedigree A wrapped function to plot simulated pedigree from function 'simulatePedigree'. This function require the installation of package 'kinship2'. |
| redsquirrels | Kluane Red Squirrel Data |