gllvmTMB-package	gllvmTMB-package
.aghq_gate	dot-aghq_gate
.gllvmTMB_multinomial_degeneracy_row	dot-gllvmTMB_multinomial_degeneracy_row
.gllvmTMB_ordinal_degeneracy_row	dot-gllvmTMB_ordinal_degeneracy_row
.proportions_bootstrap_ci	dot-proportions_bootstrap_ci
.proportions_wald_ci	dot-proportions_wald_ci
add_utm_columns	add_utm_columns
animal_dep	animal_dep
animal_indep	animal_indep
animal_latent	animal_latent
animal_scalar	animal_scalar
animal_slope	animal_slope
animal_unique	animal_unique
bar_syntax	re_int
Beta	families
betabinomial	families
block_V	block_V
bootstrap_Sigma	bootstrap_Sigma
categorical	categorical
censored_poisson	families
check_auto_residual	check_auto_residual
check_gllvmTMB	check_gllvmTMB
coef.gllvmTMB_julia	gllvmTMB_julia-methods
coef.gllvmTMB_multi	gllvmTMB_multi-vcov
coef.gllvmTMB_va	gllvmTMB_va-methods
compare_dep_vs_two_psi	compare_dep_vs_two_psi
compare_indep_vs_two_psi	compare_indep_vs_two_psi
compare_loadings	compare_loadings
compare_Sigma_table	compare_Sigma_table
confint.gllvmTMB_julia	gllvmTMB_julia-methods
confint.gllvmTMB_multi	confint.gllvmTMB_multi
confint.gllvmTMB_va	gllvmTMB_va-methods
confint_inspect	confint_inspect
confirmatory_lambda	confirmatory_lambda
cumulative_logit	cumulative_logit
delta_beta	families
delta_gamma	families
delta_gamma_mix	families
delta_gengamma	families
delta_lognormal	families
delta_lognormal_mix	families
delta_poisson_link_gamma	families
delta_poisson_link_lognormal	families
delta_truncated_nbinom1	families
delta_truncated_nbinom2	families
dep	dep
deviance.gllvmTMB_multi	deviance.gllvmTMB_multi
deviance.gllvmTMB_va	gllvmTMB_va-methods
df.residual.gllvmTMB_va	gllvmTMB_va-methods
diag-keyword	diag_re
diagnose_kernel_separability	diagnose_kernel_separability
diagnostic_table	diagnostic_table
diag_re	diag_re
extract_coevolution_modules	extract_coevolution_modules
extract_communality	extract_communality
extract_correlations	extract_correlations
extract_cross_correlations	extract_cross_correlations
extract_cutpoints	extract_cutpoints
extract_Gamma	extract_Gamma
extract_ICC_site	extract_ICC_site
extract_loadings	extract_loadings
extract_lv_effects	extract_lv_effects
extract_Omega	extract_Omega
extract_ordination	extract_ordination
extract_phylo_signal	extract_phylo_signal
extract_proportions	extract_proportions
extract_repeatability	extract_repeatability
extract_residual_cor	extract_residual_cov
extract_residual_cov	extract_residual_cov
extract_residual_split	extract_residual_split
extract_rotated_loadings_table	extract_rotated_loadings_table
extract_Sigma	extract_Sigma
extract_Sigma_B	extract_Sigma_B
extract_Sigma_table	extract_Sigma_table
extract_Sigma_W	extract_Sigma_W
Families	families
fitted.gllvmTMB_julia	gllvmTMB_julia-methods
fitted.gllvmTMB_multi	fitted.gllvmTMB_multi
fitted.gllvmTMB_va	gllvmTMB_va-methods
flag_unreliable_loadings	flag_unreliable_loadings
gamma_mix	families
gengamma	families
getLoadings	getLoadings
getLV	getLV
getREsd	getREsd
getResidualCor	getResidualCov
getResidualCov	getResidualCov
get_crs	get_crs
gllvmTMB	gllvmTMB
gllvmTMBcontrol	gllvmTMBcontrol
gllvmTMB_check_consistency	gllvmTMB_check_consistency
gllvmTMB_diagnose	gllvmTMB_diagnose
gllvmTMB_julia-methods	gllvmTMB_julia-methods
gllvmTMB_multi-methods	gllvmTMB_multi-methods
gllvmTMB_multi-vcov	gllvmTMB_multi-vcov
gllvmTMB_va-methods	gllvmTMB_va-methods
gllvmTMB_wide	gllvmTMB_wide
gllvm_julia_fit	gllvm_julia_fit
gllvm_julia_setup	gllvm_julia_setup
gr	gr
imputed	imputed
imputed.gllvmTMB	imputed
impute_model	impute_model
indep	indep
isdm_source	isdm_source
isdm_sources	isdm_sources
kernel_dep	kernel_latent
kernel_indep	kernel_latent
kernel_latent	kernel_latent
kernel_scalar	kernel_scalar
kernel_unique	kernel_unique
latent	latent
loading_ci	loading_ci
loading_profile	loading_profile
logLik.gllvmTMB_julia	gllvmTMB_julia-methods
logLik.gllvmTMB_multi	gllvmTMB_multi-methods
logLik.gllvmTMB_va	gllvmTMB_va-methods
lognormal	families
lognormal_mix	families
make_cross_kernel	make_cross_kernel
make_mesh	make_mesh
meta	meta
meta_known_V	meta_known_V
meta_V	meta_V
mi	impute_model
miss_control	miss_control
mi_group	impute_model
multinomial	multinomial
nbinom1	families
nbinom2	families
nbinom2_mix	families
nobs.gllvmTMB_multi	gllvmTMB_multi-methods
nobs.gllvmTMB_va	gllvmTMB_va-methods
ordinal_probit	ordinal_probit
ordiplot	ordiplot
ordiplot.gllvmTMB_multi	ordiplot
pedigree_to_A	pedigree_to_A
pedigree_to_Ainv_sparse	pedigree_to_Ainv_sparse
phylo	phylo
phylo_dep	phylo_dep
phylo_indep	phylo_indep
phylo_latent	phylo_latent
phylo_rr	phylo_rr
phylo_scalar	phylo_scalar
phylo_signal_mi	phylo_signal_mi
phylo_slope	phylo_slope
phylo_unique	phylo_unique
plot.gllvmTMBmesh	plot.gllvmTMBmesh
plot.gllvmTMB_multi	plot.gllvmTMB_multi
plot.profile_derived	plot.profile_derived
plot.profile_loadings	plot.profile_loadings
plot.sdmTMBmesh	plot.gllvmTMBmesh
plot_anisotropy	plot_anisotropy
plot_anisotropy2	plot_anisotropy
plot_correlations	plot_correlations
plot_loadings_confidence_eye	plot_loadings_confidence_eye
plot_rotated_loadings	plot_rotated_loadings
plot_Sigma_comparison	plot_Sigma_comparison
plot_Sigma_heatmap	plot_Sigma_heatmap
plot_Sigma_table	plot_Sigma_table
predict.gllvmTMB_julia	gllvmTMB_julia-methods
predict.gllvmTMB_multi	predict.gllvmTMB_multi
predict.gllvmTMB_va	gllvmTMB_va-methods
predictive_check	predictive_check
predict_cross_covariance	predict_cross_covariance
predict_missing	predict_missing
print.gllvmTMB_julia	gllvmTMB_julia-methods
print.gllvmTMB_multi	gllvmTMB_multi-methods
print.gllvmTMB_reportable_table	print.gllvmTMB_reportable_table
print.gllvmTMB_Sigma_phy_slope	print.gllvmTMB_Sigma_phy_slope
print.gllvmTMB_va	gllvmTMB_va-methods
print.summary.gllvmTMB_julia	gllvmTMB_julia-methods
print.summary.gllvmTMB_multi	gllvmTMB_multi-methods
print.summary.gllvmTMB_va	gllvmTMB_va-methods
profile_ci_phylo_signal	profile_ci_phylo_signal
profile_ci_total_variance	profile_ci_total_variance
profile_cross_rho	profile_cross_rho
profile_cross_rho_ci	profile_cross_rho_ci
profile_phylo_signal	profile_phylo_signal
profile_targets	profile_targets
reexports	reexports
residuals.gllvmTMB_julia	gllvmTMB_julia-methods
residuals.gllvmTMB_multi	residuals.gllvmTMB_multi
residuals.gllvmTMB_va	gllvmTMB_va-methods
re_int	re_int
ridge_path	ridge_path
rotate_loadings	rotate_loadings
sanity_multi	sanity_multi
scalar	scalar
screen_control	screen_control
screen_gllvmTMB	screen_gllvmTMB
screen_table	screen_table
simulate.gllvmTMB_julia	gllvmTMB_julia-methods
simulate.gllvmTMB_multi	simulate.gllvmTMB_multi
simulate_site_trait	simulate_site_trait
simulate_unit_trait	simulate_unit_trait
slope_sd_ci	slope_sd_ci
spatial	spatial
spatial_dep	spatial_dep
spatial_indep	spatial_indep
spatial_latent	spatial_latent
spatial_scalar	spatial_scalar
spatial_unique	spatial_unique
spde	spde
standard_errors	standard_errors
student	families
suggest_lambda_constraint	suggest_lambda_constraint
suggest_lambda_constraints	suggest_lambda_constraints
summary.gllvmTMB_julia	gllvmTMB_julia-methods
summary.gllvmTMB_multi	gllvmTMB_multi-methods
summary.gllvmTMB_va	gllvmTMB_va-methods
tidy	reexports
tidy.gllvmTMB_multi	tidy.gllvmTMB_multi
tmbprofile_wrapper	tmbprofile_wrapper
traits	traits
truncated_nbinom1	families
truncated_nbinom2	families
truncated_poisson	families
tweedie	families
unique	unique_keyword
unique_keyword	unique_keyword
vcov.gllvmTMB_multi	gllvmTMB_multi-vcov
vcov.gllvmTMB_va	gllvmTMB_va-methods
VP	VP
weights.gllvmTMB_va	gllvmTMB_va-methods
