append_summary_row      Append a row to a GBIF processing summary table
bf_apply_manual_taxonomy_fixes
                        Apply manual taxonomy name and rank fixes to a
                        data frame
bf_attach_gbif_taxonomy
                        Attach GBIF taxonomy to a data frame
bf_attach_griis_status
                        Attach GRIIS status to a species or
                        species-country table
bf_attach_native_status
                        Attach native/non-native recipient status to a
                        data frame
bf_available_marine_overlays
                        List package-supported marine overlays
bf_available_native_web_sources
                        List web sources supported for native-range
                        evidence
bf_bind_gbif_chunks     Harmonise and bind GBIF result chunks
bf_cache_dir            Get a writable cache directory for biofetchR
                        spatial layers
bf_check_taxonomic_resolution
                        Check taxonomic resolution quality
bf_clean_taxon_names    Clean taxon names before taxonomy resolution
bf_download_griis       Download the GRIIS country compendium
bf_download_sinas_resources
                        Download and locate required SInAS resources
bf_enrich_raster_context
                        Enrich GBIF points with raster context layers
bf_enrich_raster_context_from_sources
                        Enrich point occurrences from explicitly
                        supplied raster context layers
bf_fetch_native_ranges_sinas
                        Fetch native-origin evidence from SInAS
bf_fetch_native_ranges_web
                        Compile species-level native-origin evidence
                        from web sources
bf_filter_griis_invasive
                        Keep rows flagged as invasive in GRIIS
bf_filter_native        Filter a data frame to confirmed native
                        recipient records
bf_filter_non_native    Filter a data frame to confirmed non-native
                        recipient records
bf_find_griis_table     Find the most likely GRIIS table in an unpacked
                        archive
bf_griis_lookup         Build a compact GRIIS lookup table
bf_load_basins          Load nested basins (HydroBASINS; Pfafstetter)
bf_load_biosphere_reserve
                        Load UNESCO biosphere reserve locations
bf_load_feow            Load Freshwater Ecoregions of the World
                        polygons
bf_load_gdw_barriers    Load Global Dam Watch river barrier points
bf_load_gdw_reservoirs
                        Load Global Dam Watch reservoir polygons
bf_load_global_mining   Load global mining polygons
bf_load_gloric          Load GloRiC river reach lines
bf_load_hydrowaste      Load HydroWASTE wastewater treatment plant
                        points
bf_load_lakes           Load global lake polygons (HydroLAKES)
bf_load_marine_regions_overlay
                        Load a package-managed Marine Regions overlay
bf_load_ne_admin1       Load Natural Earth Admin-1 (States/Provinces)
                        (auto-download + cache)
bf_load_ne_urban        Load Natural Earth Urban Areas (auto-download +
                        cache)
bf_load_ne_urban_areas
                        Load Natural Earth Urban Areas (polygons),
                        auto-downloaded and cached
bf_load_ramsar          Load Ramsar wetland polygons for selected
                        countries
bf_load_resolve2017     Load RESOLVE Ecoregions (2017) (auto-download +
                        cache)
bf_load_resolve_ecoregions2017
                        Load RESOLVE Ecoregions 2017 (polygons),
                        auto-downloaded and cached
bf_load_rivers          Load global river reaches (HydroRIVERS) with
                        optional caching
bf_load_teow            Load & cache WWF Terrestrial Ecoregions (TEOW)
bf_load_wdpa            Load WDPA protected-area polygons for selected
                        countries
bf_marine_overlay_canonical
                        Resolve a marine overlay alias to its canonical
                        name
bf_name_rivers_osm      Annotate HydroRIVERS reaches with OSM river
                        names
bf_native_range_lookup
                        Build a native-range lookup table
bf_native_status_summary
                        Summarise native-origin status columns
bf_prepare_taxa_for_gbif
                        Prepare taxon names for GBIF download pipelines
bf_read_griis           Read and standardise the GRIIS country
                        compendium
bf_reconcile_griis_native_status
                        Reconcile GRIIS and native-origin evidence
bf_resolve_gbif_taxonomy
                        Resolve one taxon name against GBIF
bf_resolve_gbif_taxonomy_batch
                        Resolve a vector of taxon names against GBIF
bf_sinas_default_urls   Return default SInAS 3.1.1 resource URLs
bf_standardise_griis    Standardise a raw GRIIS table
bf_standardise_native_ranges
                        Standardise native-range evidence to a
                        species-level lookup
bf_tax_extract_genus    Extract the genus component from a taxon name
bf_tax_is_genus_level   Detect genus-level or open-nomenclature names
bf_tax_looks_non_taxon
                        Detect likely non-taxonomic strings
bf_taxonomic_summary    Summarise taxonomy resolution outcomes
bf_teow_cache_info      Return cache path/info for TEOW
bf_teow_clear_cache     Clear the cached TEOW dataset
bf_unpack_griis         Unpack a cached GRIIS archive
bf_web_native_gbif      Fetch native-range evidence from the GBIF
                        Species API
bf_web_native_worms     Fetch native-range evidence from WoRMS REST
                        distributions
bf_write_native_web_outputs
                        Write native-range web evidence outputs
check_entrez_key        Check for NCBI Entrez API Key
check_gbif_presence     Check whether GBIF has coordinate-based records
                        for a species
download_gbif_batch     Submit global GBIF download jobs for
                        species-level workflows
download_gbif_batch_gadm
                        Submit country-filtered GBIF downloads for
                        terrestrial/freshwater workflows
eez_join                Join GBIF points to Exclusive Economic Zone
                        polygons
filter_by_status        Filter or normalise records by native/alien
                        status
gadm_join               Attach GADM labels to occurrence points
get_taxon_key           Retrieve a GBIF taxonKey for a scientific name
initialize_summary      Initialise a GBIF processing summary table
install_optional_deps   Report optional biofetchR dependencies
is_marine_species       Determine if a species is likely marine from
                        taxonomy
list_status_presets     List available native/non-native status presets
load_all_gadm           Load and bind GADM geometries for multiple
                        countries
load_gadm               Load GADM administrative geometries
overlay_join            Join GBIF points to Marine Regions overlays
                        (robust, with s2 fallback)
process_gbif_eez_pipeline
                        Run the marine pipeline through the legacy EEZ
                        wrapper
process_gbif_marine_pipeline
                        Process marine GBIF occurrences using
                        package-managed marine overlays
process_gbif_terrestrial_freshwater_pipeline
                        Process terrestrial and freshwater GBIF
                        occurrences
resolve_species_names   Resolve and standardise species names
thin_spatial_points     Clean and spatially thin GBIF-style occurrence
                        points
wait_and_import_gbif    Wait for GBIF occurrence downloads and import
                        completed records
wait_and_import_gbif_safe
                        Import GBIF downloads through the package
                        import helper
