# Interactive Cluster Heat Maps Using 'plotly' and 'ggplot2'

## Documentation for package ‘heatmaply’ version 1.6.0

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

Blues | RColorBrewer color Ramp Palette
BrBG | RColorBrewer color Ramp Palette
BuGn | RColorBrewer color Ramp Palette
BuPu | RColorBrewer color Ramp Palette
cool_warm | RColorBrewer color Ramp Palette
ggheatmap | ggplot heatmap equivalent to heatmaply
ggplot_side_color_plot | Side color plots for heatmaps
GnBu | RColorBrewer color Ramp Palette
Greens | RColorBrewer color Ramp Palette
Greys | RColorBrewer color Ramp Palette
heatmaply | Cluster heatmap based on plotly
heatmaply.default | Cluster heatmap based on plotly
heatmaply.heatmapr | Cluster heatmap based on plotly
heatmaply_cor | Cluster heatmap based on plotly
heatmaply_na | Cluster heatmap based on plotly
heatmapr | Creates a heatmapr object
is.heatmapr | Is the object of class heatmapr
is.na10 | Indicates which elements are missing (either 1 and 0)
is.plotly | Checks if an object is of class plotly or not.
normalize | Normalization transformation (0-1)
normalize.data.frame | Normalization transformation (0-1)
normalize.default | Normalization transformation (0-1)
normalize.matrix | Normalization transformation (0-1)
Oranges | RColorBrewer color Ramp Palette
OrRd | RColorBrewer color Ramp Palette
percentize | Empirical Percentile Transformation
percentize.data.frame | Empirical Percentile Transformation
percentize.default | Empirical Percentile Transformation
percentize.matrix | Empirical Percentile Transformation
PiYG | RColorBrewer color Ramp Palette
PRGn | RColorBrewer color Ramp Palette
PuBu | RColorBrewer color Ramp Palette
PuBuGn | RColorBrewer color Ramp Palette
PuOr | RColorBrewer color Ramp Palette
PuRd | RColorBrewer color Ramp Palette
Purples | RColorBrewer color Ramp Palette
RColorBrewer_colors | RColorBrewer color Ramp Palette
RdBu | RColorBrewer color Ramp Palette
RdGy | RColorBrewer color Ramp Palette
RdPu | RColorBrewer color Ramp Palette
RdYlBu | RColorBrewer color Ramp Palette
RdYlGn | RColorBrewer color Ramp Palette
Reds | RColorBrewer color Ramp Palette
Spectral | RColorBrewer color Ramp Palette
YlGn | RColorBrewer color Ramp Palette
YlGnBu | RColorBrewer color Ramp Palette
YlOrBr | RColorBrewer color Ramp Palette
YlOrRd | RColorBrewer color Ramp Palette