misha-package	misha-package
%>%	pipe
.gextract_track_parallel	dot-gextract_track_parallel
.gmultitasking_strategy	dot-gmultitasking_strategy
.misha	dot-misha
gbins.quantiles	gbins.quantiles
gbins.summary	gbins.summary
gcis_decay	gcis_decay
gcluster.run	gcluster.run
gcompute_strands_autocorr	gcompute_strands_autocorr
gcor	gcor
gdataset.example_path	gdataset.example_path
gdataset.info	gdataset.info
gdataset.load	gdataset.load
gdataset.ls	gdataset.ls
gdataset.save	gdataset.save
gdataset.unload	gdataset.unload
gdb.build_genome	gdb.build_genome
gdb.convert_to_indexed	gdb.convert_to_indexed
gdb.create	gdb.create
gdb.create_genome	gdb.create_genome
gdb.create_linked	gdb.create_linked
gdb.export_fasta	gdb.export_fasta
gdb.genome_info	gdb.genome_info
gdb.get_readonly_attrs	gdb.get_readonly_attrs
gdb.info	gdb.info
gdb.init	gdb.init
gdb.init.examples	gdb.init_examples
gdb.init_examples	gdb.init_examples
gdb.install_gff3_converter	gdb.install_gff3_converter
gdb.install_gtf_converter	gdb.install_gtf_converter
gdb.install_intervals	gdb.install_intervals
gdb.list_genomes	gdb.list_genomes
gdb.mark_cache_dirty	gdb.mark_cache_dirty
gdb.reload	gdb.reload
gdb.set_readonly_attrs	gdb.set_readonly_attrs
gdb.unload	gdb.unload
gdir.cd	gdir.cd
gdir.create	gdir.create
gdir.cwd	gdir.cwd
gdir.rm	gdir.rm
gdist	gdist
gextract	gextract
ggenome.implant	ggenome.implant
ggenome.transplant	ggenome.transplant
gintervals	gintervals
gintervals.2d	gintervals.2d
gintervals.2d.all	gintervals.2d.all
gintervals.2d.band_intersect	gintervals.2d.band_intersect
gintervals.2d.convert_to_indexed	gintervals.2d.convert_to_indexed
gintervals.2d.intersect	gintervals.2d.intersect
gintervals.2d.union	gintervals.2d.union
gintervals.all	gintervals.all
gintervals.annotate	gintervals.annotate
gintervals.as_chain	gintervals.as_chain
gintervals.attr.export	gintervals.attr.export
gintervals.attr.get	gintervals.attr.get
gintervals.attr.import	gintervals.attr.import
gintervals.attr.set	gintervals.attr.set
gintervals.canonic	gintervals.canonic
gintervals.chrom_sizes	gintervals.chrom_sizes
gintervals.convert_to_indexed	gintervals.convert_to_indexed
gintervals.coverage_fraction	gintervals.coverage_fraction
gintervals.covered_bp	gintervals.covered_bp
gintervals.dataset	gintervals.dataset
gintervals.dbs	gintervals.dbs
gintervals.diff	gintervals.diff
gintervals.exists	gintervals.exists
gintervals.force_range	gintervals.force_range
gintervals.from_mat	gintervals.from_mat
gintervals.from_strings	gintervals.from_strings
gintervals.import_bed	gintervals.import_bed
gintervals.import_genes	gintervals.import_genes
gintervals.import_gff	gintervals.import_gff
gintervals.import_vcf	gintervals.import_vcf
gintervals.intersect	gintervals.intersect
gintervals.is.bigset	gintervals.is.bigset
gintervals.liftover	gintervals.liftover
gintervals.load	gintervals.load
gintervals.load_chain	gintervals.load_chain
gintervals.ls	gintervals.ls
gintervals.mapply	gintervals.mapply
gintervals.mark_overlaps	gintervals.mark_overlaps
gintervals.neighbors	gintervals.neighbors
gintervals.neighbors.directional	directional-neighbors
gintervals.neighbors.downstream	directional-neighbors
gintervals.neighbors.upstream	directional-neighbors
gintervals.normalize	gintervals.normalize
gintervals.path	gintervals.path
gintervals.quantiles	gintervals.quantiles
gintervals.random	gintervals.random
gintervals.rbind	gintervals.rbind
gintervals.rm	gintervals.rm
gintervals.save	gintervals.save
gintervals.summary	gintervals.summary
gintervals.to_mat	gintervals.to_mat
gintervals.union	gintervals.union
gintervals.update	gintervals.update
giterator.cartesian_grid	giterator.cartesian_grid
giterator.intervals	giterator.intervals
glookup	glookup
gpartition	gpartition
gquantiles	gquantiles
grevcomp	grevcomp
gsample	gsample
gscreen	gscreen
gsegment	gsegment
gseq.comp	gseq.comp
gseq.extract	gseq.extract
gseq.kmer	gseq.kmer
gseq.kmer.dist	gseq.kmer.dist
gseq.pwm	gseq.pwm
gseq.pwm_edits	gseq.pwm_edits
gseq.read_homer	gseq.read_homer
gseq.read_jaspar	gseq.read_jaspar
gseq.read_meme	gseq.read_meme
gseq.rev	gseq.rev
gseq.revcomp	gseq.revcomp
gsetroot	gdb.init
gsummary	gsummary
gsynth.bin_map	gsynth.bin_map
gsynth.cell_merge	gsynth.cell_merge
gsynth.convert	gsynth.convert
gsynth.forbid_kmer	gsynth.forbid_kmer
gsynth.load	gsynth.load
gsynth.random	gsynth.random
gsynth.replace_kmer	gsynth.replace_kmer
gsynth.sample	gsynth.sample
gsynth.save	gsynth.save
gsynth.score	gsynth.score
gsynth.train	gsynth.train
gtrack.2d.convert_to_indexed	gtrack.2d.convert_to_indexed
gtrack.2d.create	gtrack.2d.create
gtrack.2d.import	gtrack.2d.import
gtrack.2d.import_contacts	gtrack.2d.import_contacts
gtrack.array.extract	gtrack.array.extract
gtrack.array.get_colnames	gtrack.array.get_colnames
gtrack.array.import	gtrack.array.import
gtrack.array.set_colnames	gtrack.array.set_colnames
gtrack.attr.export	gtrack.attr.export
gtrack.attr.get	gtrack.attr.get
gtrack.attr.import	gtrack.attr.import
gtrack.attr.set	gtrack.attr.set
gtrack.convert	gtrack.convert
gtrack.convert_to_indexed	gtrack.convert_to_indexed
gtrack.copy	gtrack.copy
gtrack.create	gtrack.create
gtrack.create_dense	gtrack.create_dense
gtrack.create_dirs	gtrack.create_dirs
gtrack.create_pwm_energy	gtrack.create_pwm_energy
gtrack.create_sparse	gtrack.create_sparse
gtrack.dataset	gtrack.dataset
gtrack.dbs	gtrack.dbs
gtrack.exists	gtrack.exists
gtrack.export_bedgraph	gtrack.export_bedgraph
gtrack.export_bigwig	gtrack.export_bigwig
gtrack.import	gtrack.import
gtrack.import_mappedseq	gtrack.import_mappedseq
gtrack.import_set	gtrack.import_set
gtrack.info	gtrack.info
gtrack.liftover	gtrack.liftover
gtrack.lookup	gtrack.lookup
gtrack.ls	gtrack.ls
gtrack.modify	gtrack.modify
gtrack.mv	gtrack.mv
gtrack.path	gtrack.path
gtrack.rm	gtrack.rm
gtrack.smooth	gtrack.smooth
gtrack.var.get	gtrack.var.get
gtrack.var.ls	gtrack.var.ls
gtrack.var.rm	gtrack.var.rm
gtrack.var.set	gtrack.var.set
gvtrack.array.slice	gvtrack.array.slice
gvtrack.clear	gvtrack.clear
gvtrack.create	gvtrack.create
gvtrack.filter	gvtrack.filter
gvtrack.info	gvtrack.info
gvtrack.iterator	gvtrack.iterator
gvtrack.iterator.2d	gvtrack.iterator.2d
gvtrack.ls	gvtrack.ls
gvtrack.rm	gvtrack.rm
gwget	gwget
gwilcox	gwilcox
misha	misha-package
misha-NaN	misha-NaN
print.gsynth.model	print.gsynth.model
rbind.intervs_mat	rbind.intervs_mat
[.intervs_mat	sub-.intervs_mat
