as.data.frame.hrri_arch	hrri_infer_architecture
attach_hrri_ids	attach_hrri_ids
benchmark_hrri	benchmark_hrri
hrri_infer_architecture	hrri_infer_architecture
HRRI_workflow_example	HRRI_workflow_example
plot_hrri_benchmark	plot_hrri_benchmark
plot_rri_accuracy	plot_rri_accuracy
plot_rri_properties	plot_rri_properties
plot_rri_recovery_landscape	plot_rri_recovery_landscape
plot_rri_recovery_map	plot_rri_recovery_map
plot_rri_simulation_demo	plot_rri_simulation_demo
plot_rri_state_space	plot_rri_state_space
plot_RRI_ternary	plot_RRI_ternary
plot_rri_timeseries	plot_rri_timeseries
plot_rri_validation	plot_rri_validation
print.hrri_arch	hrri_infer_architecture
print.hrri_arch_validation	hrri_infer_architecture
print.hrri_benchmark	benchmark_hrri
print.rri_accuracy	rri_accuracy
redoxrri_example	HRRI_workflow_example
rri_accessible_capacity	rri_accessible_capacity
rri_accuracy	rri_accuracy
rri_capacity_index	rri_capacity_index
rri_compensation_index	rri_compensation_index
rri_connectivity_score	rri_connectivity_score
rri_default_reservoirs	rri_default_reservoirs
rri_domain_influence	rri_domain_influence
rri_kinetics_score	rri_kinetics_score
rri_latent_correlation	rri_latent_correlation
rri_memory_index	rri_memory_index
rri_micro_functional_score	rri_micro_functional_score
rri_o2_demand	rri_o2_demand
rri_pipeline	rri_pipeline
rri_pipeline_st	rri_pipeline_st
rri_property_scores	rri_property_scores
rri_recovery_metrics	rri_recovery_metrics
rri_reference_scores	rri_reference_scores
rri_root_physio	rri_root_physio
rri_sensitivity	rri_sensitivity
rri_simulation_demo	rri_simulation_demo
simulate_redox_holobiont	simulate_redox_holobiont
summary.hrri_arch	hrri_infer_architecture
theme_ems	theme_ems
validate_architecture	hrri_infer_architecture
