Last updated on 2024-06-13 06:57:54 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.8.2 | 45.51 | 92.41 | 137.92 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.8.2 | 32.91 | 63.83 | 96.74 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.8.2 | 173.55 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.8.2 | 194.52 | OK | |||
| r-devel-windows-x86_64 | 1.8.2 | 40.00 | 101.00 | 141.00 | OK | |
| r-patched-linux-x86_64 | 1.8.2 | 40.17 | 84.98 | 125.15 | OK | |
| r-release-linux-x86_64 | 1.8.2 | 37.30 | 88.13 | 125.43 | OK | |
| r-release-macos-arm64 | 1.8.2 | 81.00 | NOTE | |||
| r-release-macos-x86_64 | 1.8.2 | 80.00 | NOTE | |||
| r-release-windows-x86_64 | 1.8.2 | 40.00 | 119.00 | 159.00 | OK | |
| r-oldrel-macos-arm64 | 1.8.2 | 91.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 1.8.2 | 215.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 1.8.2 | 49.00 | 123.00 | 172.00 | OK |
Version: 1.8.2
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘broom’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.8.2
Check: examples
Result: ERROR
Running examples in ‘Amelia-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: mi.combine
> ### Title: Combine results from analyses on imputed data sets
> ### Aliases: mi.combine
>
> ### ** Examples
>
> data(africa)
> a.out <- amelia(x = africa, cs = "country", ts = "year", logs =
+ "gdp_pc")
-- Imputation 1 --
1 2 3
-- Imputation 2 --
1 2 3
-- Imputation 3 --
1 2 3
-- Imputation 4 --
1 2
-- Imputation 5 --
1 2 3
>
> imp.mods <- with(a.out, lm(gdp_pc ~ infl + trade))
>
> mi.combine(imp.mods, conf.int = TRUE)
Error in `mi.combine()`:
! {broom} package required for mi.combine
Backtrace:
▆
1. └─Amelia::mi.combine(imp.mods, conf.int = TRUE)
2. └─rlang::abort("{broom} package required for mi.combine")
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.8.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘ameliaview.Rmd’ using rmarkdown
--- finished re-building ‘ameliaview.Rmd’
--- re-building ‘diagnostics.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/Amelia.Rcheck/vign_test/Amelia/vignettes/diagnostics_files/figure-html/plot_amelia-1.png
480x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 36520 bytes
Input file size = 36646 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28557
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28557
Output IDAT size = 28557 bytes (7963 bytes decrease)
Output file size = 28635 bytes (8011 bytes = 21.86% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/Amelia.Rcheck/vign_test/Amelia/vignettes/diagnostics_files/figure-html/compare_density-1.png
480x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 25583 bytes
Input file size = 25697 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21420
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21420
Output IDAT size = 21420 bytes (4163 bytes decrease)
Output file size = 21498 bytes (4199 bytes = 16.34% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/Amelia.Rcheck/vign_test/Amelia/vignettes/diagnostics_files/figure-html/unnamed-chunk-1-1.png
480x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34691 bytes
Input file size = 34817 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 30128
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 30128
Output IDAT size = 30128 bytes (4563 bytes decrease)
Output file size = 30206 bytes (4611 bytes = 13.24% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/Amelia.Rcheck/vign_test/Amelia/vignettes/diagnostics_files/figure-html/overimp_bad-1.png
480x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 29709 bytes
Input file size = 29823 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25200
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25200
Output IDAT size = 25200 bytes (4509 bytes decrease)
Output file size = 25278 bytes (4545 bytes = 15.24% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/Amelia.Rcheck/vign_test/Amelia/vignettes/diagnostics_files/figure-html/displd-1.png
480x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 20305 bytes
Input file size = 20407 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16839
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16839
Output IDAT size = 16839 bytes (3466 bytes decrease)
Output file size = 16917 bytes (3490 bytes = 17.10% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/Amelia.Rcheck/vign_test/Amelia/vignettes/diagnostics_files/figure-html/displd-2.png
480x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 20764 bytes
Input file size = 20866 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16957
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16957
Output IDAT size = 16957 bytes (3807 bytes decrease)
Output file size = 17035 bytes (3831 bytes = 18.36% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/Amelia.Rcheck/vign_test/Amelia/vignettes/diagnostics_files/figure-html/tsplot1-1.png
480x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 14546 bytes
Input file size = 14636 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11677
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11677
Output IDAT size = 11677 bytes (2869 bytes decrease)
Output file size = 11755 bytes (2881 bytes = 19.68% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/Amelia.Rcheck/vign_test/Amelia/vignettes/diagnostics_files/figure-html/mmap1-1.png
480x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19534 bytes
Input file size = 19636 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14800
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14800
Output IDAT size = 14800 bytes (4734 bytes decrease)
Output file size = 14878 bytes (4758 bytes = 24.23% decrease)
--- finished re-building ‘diagnostics.Rmd’
--- re-building ‘intro-mi.Rmd’ using rmarkdown
--- finished re-building ‘intro-mi.Rmd’
--- re-building ‘using-amelia.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/Amelia.Rcheck/vign_test/Amelia/vignettes/using-amelia_files/figure-html/unnamed-chunk-1-1.png
480x384 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7395 bytes
Input file size = 8253 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6678
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6678
Output IDAT size = 6678 bytes (717 bytes decrease)
Output file size = 6756 bytes (1497 bytes = 18.14% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/Amelia.Rcheck/vign_test/Amelia/vignettes/using-amelia_files/figure-html/tarrif_hist-1.png
480x384 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 6139 bytes
Input file size = 6997 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5442
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5442
Output IDAT size = 5442 bytes (697 bytes decrease)
Output file size = 5520 bytes (1477 bytes = 21.11% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/Amelia.Rcheck/vign_test/Amelia/vignettes/using-amelia_files/figure-html/tarrif_hist-2.png
480x384 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7288 bytes
Input file size = 8146 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6427
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6427
Output IDAT size = 6427 bytes (861 bytes decrease)
Output file size = 6505 bytes (1641 bytes = 20.14% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/Amelia.Rcheck/vign_test/Amelia/vignettes/using-amelia_files/figure-html/tcomp1-1.png
480x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 14565 bytes
Input file size = 14655 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11844
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11844
Output IDAT size = 11844 bytes (2721 bytes decrease)
Output file size = 11922 bytes (2733 bytes = 18.65% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/Amelia.Rcheck/vign_test/Amelia/vignettes/using-amelia_files/figure-html/tcomp1-2.png
480x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 14550 bytes
Input file size = 14640 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11651
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11651
Output IDAT size = 11651 bytes (2899 bytes decrease)
Output file size = 11729 bytes (2911 bytes = 19.88% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/Amelia.Rcheck/vign_test/Amelia/vignettes/using-amelia_files/figure-html/bounds_plot-1.png
480x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 13896 bytes
Input file size = 13986 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11300
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11300
Output IDAT size = 11300 bytes (2596 bytes decrease)
Output file size = 11378 bytes (2608 bytes = 18.65% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/Amelia.Rcheck/vign_test/Amelia/vignettes/using-amelia_files/figure-html/bounds_plot-2.png
480x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 14365 bytes
Input file size = 14455 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11476
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11476
Output IDAT size = 11476 bytes (2889 bytes decrease)
Output file size = 11554 bytes (2901 bytes = 20.07% decrease)
Quitting from lines 507-509 [mi_combine] (using-amelia.Rmd)
Error: processing vignette 'using-amelia.Rmd' failed with diagnostics:
{broom} package required for mi.combine
--- failed re-building ‘using-amelia.Rmd’
SUMMARY: processing the following file failed:
‘using-amelia.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.8.2
Check: installed package size
Result: NOTE
installed size is 5.7Mb
sub-directories of 1Mb or more:
doc 1.4Mb
libs 3.6Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64