Last updated on 2026-02-05 06:51:58 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.0 | 7.35 | 1025.38 | 1032.73 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.0.0 | 5.53 | 652.82 | 658.35 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.0.0 | 14.00 | 1618.10 | 1632.10 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.0.0 | 12.00 | 1512.02 | 1524.02 | OK | |
| r-devel-windows-x86_64 | 1.0.0 | 10.00 | 804.00 | 814.00 | OK | |
| r-patched-linux-x86_64 | 1.0.0 | 7.63 | 913.91 | 921.54 | ERROR | |
| r-release-linux-x86_64 | 1.0.0 | 7.47 | 993.83 | 1001.30 | OK | |
| r-release-macos-arm64 | 1.0.0 | 2.00 | 209.00 | 211.00 | OK | |
| r-release-macos-x86_64 | 1.0.0 | 6.00 | 882.00 | 888.00 | OK | |
| r-release-windows-x86_64 | 1.0.0 | 10.00 | 812.00 | 822.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.0 | 2.00 | 210.00 | 212.00 | NOTE | |
| r-oldrel-macos-x86_64 | 1.0.0 | 18.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.0.0 | 16.00 | 1064.00 | 1080.00 | ERROR |
Version: 1.0.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘database_characteristics.Rmd’ using rmarkdown
--- finished re-building ‘database_characteristics.Rmd’
--- re-building ‘missing_data.Rmd’ using rmarkdown
--- finished re-building ‘missing_data.Rmd’
--- re-building ‘summarise_clinical_tables_records.Rmd’ using rmarkdown
--- finished re-building ‘summarise_clinical_tables_records.Rmd’
--- re-building ‘summarise_concept_id_counts.Rmd’ using rmarkdown
--- finished re-building ‘summarise_concept_id_counts.Rmd’
--- re-building ‘summarise_observation_period.Rmd’ using rmarkdown
Quitting from summarise_observation_period.Rmd:160-168 [unnamed-chunk-10]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `if (x$plot_header_text_bold) ...`:
! argument is of length zero
---
Backtrace:
▆
1. └─OmopSketch::plotObservationPeriod(...)
2. └─visOmopResults::barPlot(...)
3. └─visOmopResults:::validateStyle(style = style, obj = "plot", type = type)
4. └─visOmopResults:::formatPlotStyle(x = internalStyle, fontsizeRef = fontsizeRef)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'summarise_observation_period.Rmd' failed with diagnostics:
argument is of length zero
--- failed re-building ‘summarise_observation_period.Rmd’
--- re-building ‘summarise_person.Rmd’ using rmarkdown
--- finished re-building ‘summarise_person.Rmd’
--- re-building ‘summarise_trend.Rmd’ using rmarkdown
Quitting from summarise_trend.Rmd:262-277 [unnamed-chunk-15]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `if (x$plot_header_text_bold) ...`:
! argument is of length zero
---
Backtrace:
▆
1. └─OmopSketch::plotTrend(result = result, colour = "sex", facet = "age_group")
2. └─visOmopResults::scatterPlot(...)
3. └─visOmopResults:::validateStyle(style = style, obj = "plot", type = type)
4. └─visOmopResults:::formatPlotStyle(x = internalStyle, fontsizeRef = fontsizeRef)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'summarise_trend.Rmd' failed with diagnostics:
argument is of length zero
--- failed re-building ‘summarise_trend.Rmd’
SUMMARY: processing the following files failed:
‘summarise_observation_period.Rmd’ ‘summarise_trend.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-linux-x86_64
Version: 1.0.0
Check: installed package size
Result: NOTE
installed size is 31.7Mb
sub-directories of 1Mb or more:
doc 29.4Mb
help 2.0Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-windows-x86_64
Version: 1.0.0
Check: package dependencies
Result: ERROR
Package required and available but unsuitable version: ‘PatientProfiles’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-oldrel-macos-x86_64
Version: 1.0.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'database_characteristics.Rmd' using rmarkdown
--- finished re-building 'database_characteristics.Rmd'
--- re-building 'missing_data.Rmd' using rmarkdown
--- finished re-building 'missing_data.Rmd'
--- re-building 'summarise_clinical_tables_records.Rmd' using rmarkdown
--- finished re-building 'summarise_clinical_tables_records.Rmd'
--- re-building 'summarise_concept_id_counts.Rmd' using rmarkdown
--- finished re-building 'summarise_concept_id_counts.Rmd'
--- re-building 'summarise_observation_period.Rmd' using rmarkdown
Quitting from summarise_observation_period.Rmd:160-168 [unnamed-chunk-10]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `if (x$plot_header_text_bold) ...`:
! argument is of length zero
---
Backtrace:
▆
1. └─OmopSketch::plotObservationPeriod(...)
2. └─visOmopResults::barPlot(...)
3. └─visOmopResults:::validateStyle(style = style, obj = "plot", type = type)
4. └─visOmopResults:::formatPlotStyle(x = internalStyle, fontsizeRef = fontsizeRef)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'summarise_observation_period.Rmd' failed with diagnostics:
argument is of length zero
--- failed re-building 'summarise_observation_period.Rmd'
--- re-building 'summarise_person.Rmd' using rmarkdown
--- finished re-building 'summarise_person.Rmd'
--- re-building 'summarise_trend.Rmd' using rmarkdown
Quitting from summarise_trend.Rmd:262-277 [unnamed-chunk-15]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `if (x$plot_header_text_bold) ...`:
! argument is of length zero
---
Backtrace:
▆
1. └─OmopSketch::plotTrend(result = result, colour = "sex", facet = "age_group")
2. └─visOmopResults::scatterPlot(...)
3. └─visOmopResults:::validateStyle(style = style, obj = "plot", type = type)
4. └─visOmopResults:::formatPlotStyle(x = internalStyle, fontsizeRef = fontsizeRef)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'summarise_trend.Rmd' failed with diagnostics:
argument is of length zero
--- failed re-building 'summarise_trend.Rmd'
SUMMARY: processing the following files failed:
'summarise_observation_period.Rmd' 'summarise_trend.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-oldrel-windows-x86_64