Last updated on 2025-12-14 17:49:49 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 5.3.1 | 115.08 | 754.79 | 869.87 | OK | |
| r-devel-linux-x86_64-debian-gcc | 5.3.1 | 78.55 | 461.16 | 539.71 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 5.3.1 | 227.00 | 1155.19 | 1382.19 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 5.4.0 | 240.00 | 1256.61 | 1496.61 | OK | |
| r-devel-windows-x86_64 | 5.3.1 | 120.00 | 879.00 | 999.00 | OK | |
| r-patched-linux-x86_64 | 5.3.1 | 126.54 | 719.02 | 845.56 | OK | |
| r-release-linux-x86_64 | 5.3.1 | 107.43 | 665.13 | 772.56 | ERROR | |
| r-release-macos-arm64 | 5.4.0 | 24.00 | 154.00 | 178.00 | OK | |
| r-release-macos-x86_64 | 5.4.0 | 77.00 | 443.00 | 520.00 | OK | |
| r-release-windows-x86_64 | 5.3.1 | 118.00 | 840.00 | 958.00 | OK | |
| r-oldrel-macos-arm64 | 5.4.0 | 24.00 | 155.00 | 179.00 | NOTE | |
| r-oldrel-macos-x86_64 | 5.4.0 | 77.00 | 539.00 | 616.00 | NOTE | |
| r-oldrel-windows-x86_64 | 5.3.1 | 168.00 | 1357.00 | 1525.00 | NOTE |
Version: 5.3.1
Check: examples
Result: ERROR
Running examples in ‘Seurat-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: CustomDistance
> ### Title: Run a custom distance function on an input data matrix
> ### Aliases: CustomDistance
>
> ### ** Examples
>
> data("pbmc_small")
> # Define custom distance matrix
> manhattan.distance <- function(x, y) return(sum(abs(x-y)))
>
> input.data <- GetAssayData(pbmc_small, assay.type = "RNA", slot = "scale.data")
Warning: The following arguments are not used: assay.type
Error:
! The `slot` argument of `GetAssayData()` was deprecated in SeuratObject
5.0.0 and is now defunct.
ℹ Please use the `layer` argument instead.
Backtrace:
▆
1. ├─SeuratObject::GetAssayData(pbmc_small, assay.type = "RNA", slot = "scale.data")
2. └─SeuratObject:::GetAssayData.Seurat(...)
3. └─SeuratObject::.Deprecate(...)
4. └─lifecycle::deprecate_stop(...)
5. └─lifecycle:::deprecate_stop0(msg)
6. └─rlang::cnd_signal(...)
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 5.3.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [189s/237s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(Seurat)
Loading required package: SeuratObject
Loading required package: sp
Attaching package: 'SeuratObject'
The following objects are masked from 'package:base':
intersect, t
> #
> # # Run tests for 'v3'
> # message('Run tests for v3 assay')
> # options(Seurat.object.assay.version = 'v3')
> # test_check("Seurat")
>
> # Run tests for 'v5'
> message('Run tests for v5 assay')
Run tests for v5 assay
> options(Seurat.object.assay.version = 'v5')
> test_check("Seurat")
|
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|======================================================================| 100%
Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck
Number of nodes: 80
Number of edges: 525
Running Louvain algorithm...
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Maximum modularity in 10 random starts: 0.8255
Number of communities: 6
Elapsed time: 0 seconds
Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck
Number of nodes: 80
Number of edges: 525
Running Louvain algorithm...
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Maximum modularity in 10 random starts: 0.8255
Number of communities: 6
Elapsed time: 0 seconds
Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck
Number of nodes: 80
Number of edges: 525
Running Louvain algorithm with multilevel refinement...
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Maximum modularity in 10 random starts: 0.8255
Number of communities: 6
Elapsed time: 0 seconds
Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck
Number of nodes: 80
Number of edges: 525
Running smart local moving algorithm...
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Maximum modularity in 10 random starts: 0.8255
Number of communities: 6
Elapsed time: 0 seconds
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
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**************************************************|
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[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Performing log-normalization
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[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Performing log-normalization
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[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Performing log-normalization
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Saving _problems/test_preprocessing-197.R
Performing log-normalization
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Calculating gene variances
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Calculating feature variances of standardized and clipped values
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
|
| | 0%
|
|======================================================================| 100%
Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck
Number of nodes: 80
Number of edges: 2045
Running Louvain algorithm...
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Maximum modularity in 10 random starts: -0.0613
Number of communities: 64
Elapsed time: 0 seconds
Performing log-normalization
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
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Performing log-normalization
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**************************************************|
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Performing log-normalization
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Performing log-normalization
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[ FAIL 1 | WARN 0 | SKIP 24 | PASS 700 ]
══ Skipped tests (24) ══════════════════════════════════════════════════════════
• On CRAN (24): 'test_differential_expression.R:307:3',
'test_differential_expression.R:349:3',
'test_differential_expression.R:455:3', 'test_integratedata.R:111:3',
'test_integration.R:74:3', 'test_integration.R:105:3',
'test_integration.R:136:3', 'test_integration.R:170:3',
'test_integration.R:202:3', 'test_integration.R:234:3',
'test_integration.R:264:3', 'test_integration.R:306:3',
'test_integration.R:335:3', 'test_integration.R:365:3',
'test_integration5.R:38:3', 'test_integration5.R:331:3',
'test_objects.R:6:3', 'test_preprocessing.R:140:3',
'test_preprocessing.R:158:3', 'test_transferdata.R:65:3',
'test_transferdata.R:88:3', 'test_transferdata.R:100:3',
'test_transferdata.R:112:3', 'test_transferdata.R:128:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_preprocessing.R:192:1'): (code run outside of `test_that()`) ───
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: The `slot` argument of `SetAssayData()` was deprecated in SeuratObject
5.0.0 and is now defunct.
ℹ Please use the `layer` argument instead.
Backtrace:
▆
1. ├─SeuratObject::SetAssayData(...) at test_preprocessing.R:192:1
2. └─SeuratObject:::SetAssayData.Seurat(...)
3. └─SeuratObject::.Deprecate(...)
4. └─lifecycle::deprecate_stop(...)
5. └─lifecycle:::deprecate_stop0(msg)
6. └─rlang::cnd_signal(...)
[ FAIL 1 | WARN 0 | SKIP 24 | PASS 700 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 5.3.1
Check: examples
Result: ERROR
Running examples in ‘Seurat-Ex.R’ failed
The error most likely occurred in:
> ### Name: CustomDistance
> ### Title: Run a custom distance function on an input data matrix
> ### Aliases: CustomDistance
>
> ### ** Examples
>
> data("pbmc_small")
> # Define custom distance matrix
> manhattan.distance <- function(x, y) return(sum(abs(x-y)))
>
> input.data <- GetAssayData(pbmc_small, assay.type = "RNA", slot = "scale.data")
Warning: The following arguments are not used: assay.type
Error:
! The `slot` argument of `GetAssayData()` was deprecated in SeuratObject
5.0.0 and is now defunct.
ℹ Please use the `layer` argument instead.
Backtrace:
▆
1. ├─SeuratObject::GetAssayData(pbmc_small, assay.type = "RNA", slot = "scale.data")
2. └─SeuratObject:::GetAssayData.Seurat(...)
3. └─SeuratObject::.Deprecate(...)
4. └─lifecycle::deprecate_stop(...)
5. └─lifecycle:::deprecate_stop0(msg)
6. └─rlang::cnd_signal(...)
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 5.3.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [8m/15m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(Seurat)
Loading required package: SeuratObject
Loading required package: sp
Attaching package: 'SeuratObject'
The following objects are masked from 'package:base':
intersect, t
> #
> # # Run tests for 'v3'
> # message('Run tests for v3 assay')
> # options(Seurat.object.assay.version = 'v3')
> # test_check("Seurat")
>
> # Run tests for 'v5'
> message('Run tests for v5 assay')
Run tests for v5 assay
> options(Seurat.object.assay.version = 'v5')
> test_check("Seurat")
|
| | 0%
|
|======================================================================| 100%
Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck
Number of nodes: 80
Number of edges: 525
Running Louvain algorithm...
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Maximum modularity in 10 random starts: 0.8255
Number of communities: 6
Elapsed time: 0 seconds
Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck
Number of nodes: 80
Number of edges: 525
Running Louvain algorithm...
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Maximum modularity in 10 random starts: 0.8255
Number of communities: 6
Elapsed time: 0 seconds
Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck
Number of nodes: 80
Number of edges: 525
Running Louvain algorithm with multilevel refinement...
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Maximum modularity in 10 random starts: 0.8255
Number of communities: 6
Elapsed time: 0 seconds
Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck
Number of nodes: 80
Number of edges: 525
Running smart local moving algorithm...
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Maximum modularity in 10 random starts: 0.8255
Number of communities: 6
Elapsed time: 0 seconds
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
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[----|----|----|----|----|----|----|----|----|----|
**************************************************|
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
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[----|----|----|----|----|----|----|----|----|----|
**************************************************|
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[----|----|----|----|----|----|----|----|----|----|
**************************************************|
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Performing log-normalization
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Performing log-normalization
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Performing log-normalization
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Saving _problems/test_preprocessing-197.R
Performing log-normalization
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Calculating gene variances
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Calculating feature variances of standardized and clipped values
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
|
| | 0%
|
|======================================================================| 100%
Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck
Number of nodes: 80
Number of edges: 2045
Running Louvain algorithm...
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Maximum modularity in 10 random starts: -0.0613
Number of communities: 64
Elapsed time: 0 seconds
Performing log-normalization
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
|
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Performing log-normalization
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[----|----|----|----|----|----|----|----|----|----|
**************************************************|
|
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|======================= | 33%
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Performing log-normalization
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[----|----|----|----|----|----|----|----|----|----|
**************************************************|
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Performing log-normalization
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[----|----|----|----|----|----|----|----|----|----|
**************************************************|
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[ FAIL 1 | WARN 0 | SKIP 24 | PASS 700 ]
══ Skipped tests (24) ══════════════════════════════════════════════════════════
• On CRAN (24): 'test_differential_expression.R:307:3',
'test_differential_expression.R:349:3',
'test_differential_expression.R:455:3', 'test_integratedata.R:111:3',
'test_integration.R:74:3', 'test_integration.R:105:3',
'test_integration.R:136:3', 'test_integration.R:170:3',
'test_integration.R:202:3', 'test_integration.R:234:3',
'test_integration.R:264:3', 'test_integration.R:306:3',
'test_integration.R:335:3', 'test_integration.R:365:3',
'test_integration5.R:38:3', 'test_integration5.R:331:3',
'test_objects.R:6:3', 'test_preprocessing.R:140:3',
'test_preprocessing.R:158:3', 'test_transferdata.R:65:3',
'test_transferdata.R:88:3', 'test_transferdata.R:100:3',
'test_transferdata.R:112:3', 'test_transferdata.R:128:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_preprocessing.R:192:1'): (code run outside of `test_that()`) ───
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: The `slot` argument of `SetAssayData()` was deprecated in SeuratObject
5.0.0 and is now defunct.
ℹ Please use the `layer` argument instead.
Backtrace:
▆
1. ├─SeuratObject::SetAssayData(...) at test_preprocessing.R:192:1
2. └─SeuratObject:::SetAssayData.Seurat(...)
3. └─SeuratObject::.Deprecate(...)
4. └─lifecycle::deprecate_stop(...)
5. └─lifecycle:::deprecate_stop0(msg)
6. └─rlang::cnd_signal(...)
[ FAIL 1 | WARN 0 | SKIP 24 | PASS 700 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 5.3.1
Check: examples
Result: ERROR
Running examples in ‘Seurat-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: CustomDistance
> ### Title: Run a custom distance function on an input data matrix
> ### Aliases: CustomDistance
>
> ### ** Examples
>
> data("pbmc_small")
> # Define custom distance matrix
> manhattan.distance <- function(x, y) return(sum(abs(x-y)))
>
> input.data <- GetAssayData(pbmc_small, assay.type = "RNA", slot = "scale.data")
Warning: The following arguments are not used: assay.type
Error:
! The `slot` argument of `GetAssayData()` was deprecated in SeuratObject
5.0.0 and is now defunct.
ℹ Please use the `layer` argument instead.
Backtrace:
▆
1. ├─SeuratObject::GetAssayData(pbmc_small, assay.type = "RNA", slot = "scale.data")
2. └─SeuratObject:::GetAssayData.Seurat(...)
3. └─SeuratObject::.Deprecate(...)
4. └─lifecycle::deprecate_stop(...)
5. └─lifecycle:::deprecate_stop0(msg)
6. └─rlang::cnd_signal(...)
Execution halted
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
CombinePlots 4.127 0.05 6.244
Flavor: r-release-linux-x86_64
Version: 5.3.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [291s/402s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(Seurat)
Loading required package: SeuratObject
Loading required package: sp
Attaching package: 'SeuratObject'
The following objects are masked from 'package:base':
intersect, t
> #
> # # Run tests for 'v3'
> # message('Run tests for v3 assay')
> # options(Seurat.object.assay.version = 'v3')
> # test_check("Seurat")
>
> # Run tests for 'v5'
> message('Run tests for v5 assay')
Run tests for v5 assay
> options(Seurat.object.assay.version = 'v5')
> test_check("Seurat")
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Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck
Number of nodes: 80
Number of edges: 525
Running Louvain algorithm...
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Maximum modularity in 10 random starts: 0.8255
Number of communities: 6
Elapsed time: 0 seconds
Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck
Number of nodes: 80
Number of edges: 525
Running Louvain algorithm...
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Maximum modularity in 10 random starts: 0.8255
Number of communities: 6
Elapsed time: 0 seconds
Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck
Number of nodes: 80
Number of edges: 525
Running Louvain algorithm with multilevel refinement...
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[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Maximum modularity in 10 random starts: 0.8255
Number of communities: 6
Elapsed time: 0 seconds
Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck
Number of nodes: 80
Number of edges: 525
Running smart local moving algorithm...
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[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Maximum modularity in 10 random starts: 0.8255
Number of communities: 6
Elapsed time: 0 seconds
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[----|----|----|----|----|----|----|----|----|----|
**************************************************|
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**************************************************|
Performing log-normalization
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[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Performing log-normalization
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**************************************************|
Performing log-normalization
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[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Saving _problems/test_preprocessing-197.R
Performing log-normalization
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[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Calculating gene variances
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[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Calculating feature variances of standardized and clipped values
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[----|----|----|----|----|----|----|----|----|----|
**************************************************|
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Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck
Number of nodes: 80
Number of edges: 2045
Running Louvain algorithm...
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Maximum modularity in 10 random starts: -0.0613
Number of communities: 64
Elapsed time: 0 seconds
Performing log-normalization
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[ FAIL 1 | WARN 0 | SKIP 24 | PASS 700 ]
══ Skipped tests (24) ══════════════════════════════════════════════════════════
• On CRAN (24): 'test_differential_expression.R:307:3',
'test_differential_expression.R:349:3',
'test_differential_expression.R:455:3', 'test_integratedata.R:111:3',
'test_integration.R:74:3', 'test_integration.R:105:3',
'test_integration.R:136:3', 'test_integration.R:170:3',
'test_integration.R:202:3', 'test_integration.R:234:3',
'test_integration.R:264:3', 'test_integration.R:306:3',
'test_integration.R:335:3', 'test_integration.R:365:3',
'test_integration5.R:38:3', 'test_integration5.R:331:3',
'test_objects.R:6:3', 'test_preprocessing.R:140:3',
'test_preprocessing.R:158:3', 'test_transferdata.R:65:3',
'test_transferdata.R:88:3', 'test_transferdata.R:100:3',
'test_transferdata.R:112:3', 'test_transferdata.R:128:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_preprocessing.R:192:1'): (code run outside of `test_that()`) ───
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: The `slot` argument of `SetAssayData()` was deprecated in SeuratObject
5.0.0 and is now defunct.
ℹ Please use the `layer` argument instead.
Backtrace:
▆
1. ├─SeuratObject::SetAssayData(...) at test_preprocessing.R:192:1
2. └─SeuratObject:::SetAssayData.Seurat(...)
3. └─SeuratObject::.Deprecate(...)
4. └─lifecycle::deprecate_stop(...)
5. └─lifecycle:::deprecate_stop0(msg)
6. └─rlang::cnd_signal(...)
[ FAIL 1 | WARN 0 | SKIP 24 | PASS 700 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-linux-x86_64
Version: 5.4.0
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking:
'BPCells', 'glmGamPoi', 'MAST', 'monocle', 'presto'
Flavor: r-oldrel-macos-arm64
Version: 5.4.0
Check: installed package size
Result: NOTE
installed size is 11.2Mb
sub-directories of 1Mb or more:
R 2.1Mb
libs 8.2Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 5.4.0
Check: Rd cross-references
Result: NOTE
Package unavailable to check Rd xrefs: ‘BPCells’
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 5.4.0
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking:
'BPCells', 'monocle', 'presto'
Flavor: r-oldrel-macos-x86_64
Version: 5.3.1
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking: 'BPCells', 'presto'
Flavor: r-oldrel-windows-x86_64
Version: 5.3.1
Check: Rd cross-references
Result: NOTE
Package unavailable to check Rd xrefs: 'BPCells'
Flavor: r-oldrel-windows-x86_64