Last updated on 2026-06-08 00:51:45 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.5 | 3.97 | 60.31 | 64.28 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.1.5 | 3.22 | 44.49 | 47.71 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.1.5 | 8.00 | 95.21 | 103.21 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 0.1.5 | 7.00 | 102.47 | 109.47 | OK | |
| r-devel-windows-x86_64 | 0.1.5 | 7.00 | 88.00 | 95.00 | OK | |
| r-patched-linux-x86_64 | 0.1.5 | 4.53 | 57.72 | 62.25 | OK | |
| r-release-linux-x86_64 | 0.1.5 | 4.68 | 57.27 | 61.95 | OK | |
| r-release-macos-arm64 | 0.1.5 | 1.00 | 22.00 | 23.00 | OK | |
| r-release-macos-x86_64 | 0.1.5 | 3.00 | 75.00 | 78.00 | OK | |
| r-release-windows-x86_64 | 0.1.5 | 8.00 | 86.00 | 94.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.5 | OK | ||||
| r-oldrel-macos-x86_64 | 0.1.5 | 4.00 | 118.00 | 122.00 | OK | |
| r-oldrel-windows-x86_64 | 0.1.5 | 8.00 | 100.00 | 108.00 | OK |
Version: 0.1.5
Check: for missing documentation entries
Result: WARN
Warning in file(open = "w+") :
cannot open file '/tmp/RtmpgOEXfC/Rf27d3231177196b': No space left on device
Error in file(open = "w+") : cannot open the connection
Calls: <Anonymous> -> .load_package_quietly -> .try_quietly -> file
Execution halted
All user-level objects in a package should have documentation entries.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.1.5
Check: tests
Result: ERROR
Running ‘testthat.R’ [3s/3s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(bioseq)
>
> test_check("bioseq")
sh: 1: /tmp/RtmpcIi3OZ/file27ee0f642e1d9a: Permission denied
sh: 1: /tmp/RtmpcIi3OZ/file27ee0f10a06647: Permission denied
sh: 1: /tmp/RtmpcIi3OZ/file27ee0f2267ffdc: Permission denied
sh: 1: /tmp/RtmpcIi3OZ/file27ee0f7305b896: Permission denied
sh: 1: /tmp/RtmpcIi3OZ/file27ee0f7448648f: Permission denied
sh: 1: /tmp/RtmpcIi3OZ/file27ee0f36dd8801: Permission denied
sh: 1: /tmp/RtmpcIi3OZ/file27ee0f2e7dc69c: Permission denied
sh: 1: /tmp/RtmpcIi3OZ/file27ee0f48d1ff40: Permission denied
sh: 1: /tmp/RtmpcIi3OZ/file27ee0f576267a6: Permission denied
Saving _problems/test-print-methods-20.R
Saving _problems/test-read-write-fasta-114.R
[ FAIL 2 | WARN 3 | SKIP 0 | PASS 226 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-print-methods.R:20:3'): AA prints correctly ────────────────────
Error in `file(file, if (append) "a" else "w")`: cannot open the connection
Backtrace:
▆
1. └─testthat::expect_output(print(test), "AA vector of 3 sequences") at test-print-methods.R:20:3
2. └─testthat:::quasi_capture(...)
3. └─testthat (local) .capture(...)
4. └─testthat::capture_output_lines(code, print, width = width)
5. └─testthat:::eval_with_output(code, print = print, width = width)
6. └─withr::with_output_sink(path, withVisible(code))
7. └─withr:::set_output_sink(file = new, append = append, split = split)
8. └─withr:::output_sink(file = file, append = append, split = split)
9. └─base::sink(file = file, append = append, type = "output", split = split)
10. └─base::file(file, if (append) "a" else "w")
── Error ('test-read-write-fasta.R:114:3'): Read/write fasta works with block and line length arguments ──
Error in `open.connection(file, "wb")`: cannot open the connection
Backtrace:
▆
1. └─bioseq::write_fasta(...) at test-read-write-fasta.R:114:3
2. └─readr::write_file(fas, file, append = append)
3. ├─base::open(file, "wb")
4. └─base::open.connection(file, "wb")
[ FAIL 2 | WARN 3 | SKIP 0 | PASS 226 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc