Last updated on 2024-06-21 06:58:10 CEST.
Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
---|---|---|---|---|---|---|
r-devel-linux-x86_64-debian-clang | 0.2.6 | 24.84 | 1118.89 | 1143.73 | OK | |
r-devel-linux-x86_64-debian-gcc | 0.2.6 | 18.04 | 292.41 | 310.45 | ERROR | |
r-devel-linux-x86_64-fedora-clang | 0.2.6 | 1398.44 | OK | |||
r-devel-linux-x86_64-fedora-gcc | 0.2.6 | 1399.79 | OK | |||
r-devel-windows-x86_64 | 0.2.6 | 21.00 | 673.00 | 694.00 | OK | |
r-patched-linux-x86_64 | 0.2.6 | 27.69 | 1067.86 | 1095.55 | OK | |
r-release-linux-x86_64 | 0.2.6 | 25.97 | 1058.85 | 1084.82 | OK | |
r-release-macos-arm64 | 0.2.6 | 216.00 | OK | |||
r-release-macos-x86_64 | 0.2.6 | 484.00 | OK | |||
r-release-windows-x86_64 | 0.2.6 | 21.00 | 674.00 | 695.00 | OK | |
r-oldrel-macos-arm64 | 0.2.6 | 232.00 | OK | |||
r-oldrel-macos-x86_64 | 0.2.6 | 379.00 | OK | |||
r-oldrel-windows-x86_64 | 0.2.6 | 27.00 | 924.00 | 951.00 | OK |
Version: 0.2.6
Check: examples
Result: ERROR
Running examples in ‘chevron-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ael01_nollt_main
> ### Title: 'AEL01_NOLLT' Listing 1 (Default) Glossary of Preferred Terms
> ### and Investigator-Specified Terms.
> ### Aliases: ael01_nollt_main ael01_nollt_pre ael01_nollt_post ael01_nollt
> ### Keywords: datasets
>
> ### ** Examples
>
> run(ael01_nollt, syn_data)
Error in h(simpleError(msg, call)) :
error in evaluating the argument 'x' in selecting a method for function 'toString': argument "fontspec" is missing, with no default
Calls: <Anonymous> ... wrap_txt -> open_font_dev -> .handleSimpleError -> h
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.2.6
Check: tests
Result: ERROR
Running ‘testthat.R’ [156s/215s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(checkmate)
> library(chevron)
>
> test_check("chevron")
[ FAIL 171 | WARN 0 | SKIP 11 | PASS 169 ]
══ Skipped tests (11) ══════════════════════════════════════════════════════════
• !interactive() is TRUE (1): 'test-chevron_tlg-methods.R:185:3'
• On CRAN (10): 'test-chevron_tlg-methods.R:219:3',
'test-chevron_tlg-methods.R:223:3', 'test-mng01.R:10:5', 'test-mng01.R:45:5',
'test-mng01.R:68:5', 'test-mng01.R:80:5', 'test-mng01.R:97:5',
'test-mng01.R:117:5', 'test-mng01.R:134:5', 'test-utils.R:76:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-ael01_nollt.R:7:3'): ael01_nollt works with admh dataset ───────
Error in `FUN(X[[i]], ...)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─testthat::expect_snapshot(cat(export_as_txt(res, lpp = 100))) at test-ael01_nollt.R:7:3
2. └─rlang::cnd_signal(state$error)
── Error ('test-ael01_nollt.R:20:3'): ael01_nollt works with non-default label ──
Error in `FUN(X[[i]], ...)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─testthat::expect_snapshot(cat(export_as_txt(res, lpp = 100))) at test-ael01_nollt.R:20:3
2. └─rlang::cnd_signal(state$error)
── Error ('test-ael01_nollt.R:33:3'): ael01_nollt can handle all missing values ──
Error in `FUN(X[[i]], ...)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─testthat::expect_snapshot(cat(export_as_txt(res, lpp = 100))) at test-ael01_nollt.R:33:3
2. └─rlang::cnd_signal(state$error)
── Error ('test-ael01_nollt.R:48:3'): ael01_nollt can handle some missing values ──
Error in `FUN(X[[i]], ...)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─testthat::expect_snapshot(cat(export_as_txt(res, lpp = 100))) at test-ael01_nollt.R:48:3
2. └─rlang::cnd_signal(state$error)
── Error ('test-ael01_nollt.R:63:3'): ael01_nollt listing can be split by an additional variable ──
Error in `FUN(X[[i]], ...)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─testthat::expect_snapshot(cat(export_as_txt(res, lpp = 100))) at test-ael01_nollt.R:63:3
2. └─rlang::cnd_signal(state$error)
── Error ('test-ael01_nollt.R:81:3'): split ael01_nollt listing do not display missing values ──
Error in `FUN(X[[i]], ...)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─testthat::expect_snapshot(cat(export_as_txt(res, lpp = 100))) at test-ael01_nollt.R:81:3
2. └─rlang::cnd_signal(state$error)
── Error ('test-aet01.R:11:3'): aet01 can handle all NA values ─────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(aet01, proc_data)) at test-aet01.R:11:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(aet01, proc_data)
10. ├─chevron::run(aet01, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. ├─base::rbind(...)
15. ├─base::rbind(...)
16. └─rtables::build_table(lyts$ae1, adam_db$adae, alt_counts_df = adam_db$adsl)
17. └─rtables::update_ref_indexing(tab)
18. ├─formatters::make_row_df(tt)
19. └─rtables::make_row_df(tt)
20. └─rtables (local) .local(...)
21. ├─formatters::make_row_df(...)
22. └─rtables::make_row_df(...)
23. └─rtables (local) .local(...)
24. ├─formatters::pagdfrow(...)
25. │ └─base::data.frame(...)
26. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
27. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables (local) .local(x, colwidths, max_width)
29. ├─base::unlist(...)
30. └─base::mapply(...)
31. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
32. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
33. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. ├─base::unlist(...)
35. └─base::vapply(...)
36. ├─formatters (local) FUN(X[[i]], ...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─base::vapply(...)
39. └─formatters (local) FUN(X[[i]], ...)
40. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
41. └─formatters::open_font_dev(fontspec)
── Error ('test-aet01.R:28:3'): aet01 can handle some NA values ────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(aet01, proc_data)) at test-aet01.R:28:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(aet01, proc_data)
10. ├─chevron::run(aet01, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. ├─base::rbind(...)
15. ├─base::rbind(...)
16. └─rtables::build_table(lyts$ae1, adam_db$adae, alt_counts_df = adam_db$adsl)
17. └─rtables::update_ref_indexing(tab)
18. ├─formatters::make_row_df(tt)
19. └─rtables::make_row_df(tt)
20. └─rtables (local) .local(...)
21. ├─formatters::make_row_df(...)
22. └─rtables::make_row_df(...)
23. └─rtables (local) .local(...)
24. ├─formatters::pagdfrow(...)
25. │ └─base::data.frame(...)
26. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
27. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables (local) .local(x, colwidths, max_width)
29. ├─base::unlist(...)
30. └─base::mapply(...)
31. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
32. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
33. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. ├─base::unlist(...)
35. └─base::vapply(...)
36. ├─formatters (local) FUN(X[[i]], ...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─base::vapply(...)
39. └─formatters (local) FUN(X[[i]], ...)
40. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
41. └─formatters::open_font_dev(fontspec)
── Error ('test-aet01.R:34:3'): aet01 can use custom anl_vars ──────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(aet01, proc_data, anl_vars = list(safety_var = "FATAL"))) at test-aet01.R:34:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(aet01, proc_data, anl_vars = list(safety_var = "FATAL"))
10. ├─chevron::run(aet01, proc_data, anl_vars = list(safety_var = "FATAL"))
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db, anl_vars = anl_vars)
14. ├─base::rbind(...)
15. ├─base::rbind(...)
16. └─rtables::build_table(lyts$ae1, adam_db$adae, alt_counts_df = adam_db$adsl)
17. └─rtables::update_ref_indexing(tab)
18. ├─formatters::make_row_df(tt)
19. └─rtables::make_row_df(tt)
20. └─rtables (local) .local(...)
21. ├─formatters::make_row_df(...)
22. └─rtables::make_row_df(...)
23. └─rtables (local) .local(...)
24. ├─formatters::pagdfrow(...)
25. │ └─base::data.frame(...)
26. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
27. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables (local) .local(x, colwidths, max_width)
29. ├─base::unlist(...)
30. └─base::mapply(...)
31. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
32. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
33. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. ├─base::unlist(...)
35. └─base::vapply(...)
36. ├─formatters (local) FUN(X[[i]], ...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─base::vapply(...)
39. └─formatters (local) FUN(X[[i]], ...)
40. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
41. └─formatters::open_font_dev(fontspec)
── Error ('test-aet01.R:53:3'): aet01 can use custom medconcept_var ────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-aet01.R:53:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(...)
10. ├─chevron::run(...)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db, anl_vars = anl_vars)
14. ├─base::rbind(...)
15. ├─base::rbind(...)
16. └─rtables::build_table(lyts$ae1, adam_db$adae, alt_counts_df = adam_db$adsl)
17. └─rtables::update_ref_indexing(tab)
18. ├─formatters::make_row_df(tt)
19. └─rtables::make_row_df(tt)
20. └─rtables (local) .local(...)
21. ├─formatters::make_row_df(...)
22. └─rtables::make_row_df(...)
23. └─rtables (local) .local(...)
24. ├─formatters::pagdfrow(...)
25. │ └─base::data.frame(...)
26. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
27. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables (local) .local(x, colwidths, max_width)
29. ├─base::unlist(...)
30. └─base::mapply(...)
31. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
32. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
33. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. ├─base::unlist(...)
35. └─base::vapply(...)
36. ├─formatters (local) FUN(X[[i]], ...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─base::vapply(...)
39. └─formatters (local) FUN(X[[i]], ...)
40. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
41. └─formatters::open_font_dev(fontspec)
── Error ('test-aet01_aesi.R:16:3'): aet01_aesi can handle all NA values ───────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(aet01_aesi, proc_data)) at test-aet01_aesi.R:16:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(aet01_aesi, proc_data)
10. ├─chevron::run(aet01_aesi, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adae, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-aet01_aesi.R:29:3'): aet01_aesi can handle some NA values ──────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(aet01_aesi, proc_data)) at test-aet01_aesi.R:29:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(aet01_aesi, proc_data)
10. ├─chevron::run(aet01_aesi, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adae, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-aet01_aesi.R:35:3'): aet01_aesi works with `ALL` argument ──────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(aet01_aesi, proc_data, aesi_vars = c("ALL"))) at test-aet01_aesi.R:35:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(aet01_aesi, proc_data, aesi_vars = c("ALL"))
10. ├─chevron::run(aet01_aesi, proc_data, aesi_vars = c("ALL"))
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db, aesi_vars = aesi_vars)
14. └─rtables::build_table(lyt, adam_db$adae, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-aet02.R:24:3'): aet02 handle empty data input ──────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(aet02, proc_data)) at test-aet02.R:24:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(aet02, proc_data)
10. ├─chevron::run(aet02, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adae, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-aet02.R:28:3'): aet02 can have different levels of row_split ───
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─chevron::run(aet02, syn_data, row_split_var = NULL) at test-aet02.R:28:3
2. ├─chevron::run(aet02, syn_data, row_split_var = NULL)
3. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
4. │ └─base::do.call(what, new_args, envir = args_env)
5. └─chevron (local) `<fn>`(adam_db = adam_db, row_split_var = row_split_var)
6. └─rtables::build_table(lyt, adam_db$adae, alt_counts_df = adam_db$adsl)
7. └─rtables::update_ref_indexing(tab)
8. ├─formatters::make_row_df(tt)
9. └─rtables::make_row_df(tt)
10. └─rtables (local) .local(...)
11. ├─formatters::make_row_df(...)
12. └─rtables::make_row_df(...)
13. └─rtables (local) .local(...)
14. ├─formatters::make_row_df(...)
15. └─rtables::make_row_df(...)
16. └─rtables (local) .local(...)
17. ├─formatters::pagdfrow(...)
18. │ └─base::data.frame(...)
19. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
20. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
21. └─rtables (local) .local(x, colwidths, max_width)
22. ├─base::unlist(...)
23. └─base::mapply(...)
24. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
25. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
26. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
27. ├─base::unlist(...)
28. └─base::vapply(...)
29. ├─formatters (local) FUN(X[[i]], ...)
30. └─formatters (local) FUN(X[[i]], ...)
31. └─base::vapply(...)
32. └─formatters (local) FUN(X[[i]], ...)
33. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
34. └─formatters::open_font_dev(fontspec)
── Error ('test-aet03.R:9:3'): aet03 can handle NA values ──────────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(aet03, proc_data)) at test-aet03.R:9:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(aet03, proc_data)
10. ├─chevron::run(aet03, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, df = adam_db$adae, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-aet03.R:26:3'): aet03 can handle some NA values ────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(aet03, proc_data)) at test-aet03.R:26:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(aet03, proc_data)
10. ├─chevron::run(aet03, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, df = adam_db$adae, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-aet04.R:9:3'): aet04 can handle NA values ──────────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(aet04, proc_data)) at test-aet04.R:9:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(aet04, proc_data)
10. ├─chevron::run(aet04, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, df = adam_db$adae, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::make_row_df(...)
29. └─rtables::make_row_df(...)
30. └─rtables (local) .local(...)
31. ├─formatters::pagdfrow(...)
32. │ └─base::data.frame(...)
33. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
34. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
35. └─rtables (local) .local(x, colwidths, max_width)
36. ├─base::unlist(...)
37. └─base::mapply(...)
38. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
39. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
40. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
41. ├─base::unlist(...)
42. └─base::vapply(...)
43. ├─formatters (local) FUN(X[[i]], ...)
44. └─formatters (local) FUN(X[[i]], ...)
45. └─base::vapply(...)
46. └─formatters (local) FUN(X[[i]], ...)
47. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
48. └─formatters::open_font_dev(fontspec)
── Error ('test-aet04.R:31:3'): aet04 can handle some NA values ────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(aet04, proc_data)) at test-aet04.R:31:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(aet04, proc_data)
10. ├─chevron::run(aet04, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, df = adam_db$adae, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::make_row_df(...)
29. └─rtables::make_row_df(...)
30. └─rtables (local) .local(...)
31. ├─formatters::pagdfrow(...)
32. │ └─base::data.frame(...)
33. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
34. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
35. └─rtables (local) .local(x, colwidths, max_width)
36. ├─base::unlist(...)
37. └─base::mapply(...)
38. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
39. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
40. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
41. ├─base::unlist(...)
42. └─base::vapply(...)
43. ├─formatters (local) FUN(X[[i]], ...)
44. └─formatters (local) FUN(X[[i]], ...)
45. └─base::vapply(...)
46. └─formatters (local) FUN(X[[i]], ...)
47. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
48. └─formatters::open_font_dev(fontspec)
── Error ('test-aet05.R:6:3'): aet05 can handle NA values ──────────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(aet05, proc_data)) at test-aet05.R:6:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(aet05, proc_data)
10. ├─chevron::run(aet05, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db[[dataset]], alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::pagdfrow(...)
29. │ └─base::data.frame(...)
30. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
31. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
32. └─rtables (local) .local(x, colwidths, max_width)
33. ├─base::unlist(...)
34. └─base::mapply(...)
35. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
36. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
37. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
38. ├─base::unlist(...)
39. └─base::vapply(...)
40. ├─formatters (local) FUN(X[[i]], ...)
41. └─formatters (local) FUN(X[[i]], ...)
42. └─base::vapply(...)
43. └─formatters (local) FUN(X[[i]], ...)
44. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
45. └─formatters::open_font_dev(fontspec)
── Error ('test-aet05.R:23:3'): aet05 can handle some NA values ────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(aet05, proc_data)) at test-aet05.R:23:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(aet05, proc_data)
10. ├─chevron::run(aet05, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db[[dataset]], alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::pagdfrow(...)
29. │ └─base::data.frame(...)
30. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
31. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
32. └─rtables (local) .local(x, colwidths, max_width)
33. ├─base::unlist(...)
34. └─base::mapply(...)
35. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
36. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
37. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
38. ├─base::unlist(...)
39. └─base::vapply(...)
40. ├─formatters (local) FUN(X[[i]], ...)
41. └─formatters (local) FUN(X[[i]], ...)
42. └─base::vapply(...)
43. └─formatters (local) FUN(X[[i]], ...)
44. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
45. └─formatters::open_font_dev(fontspec)
── Error ('test-aet05_all.R:6:3'): aet05_all can handle NA values ──────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(aet05_all, proc_data)) at test-aet05_all.R:6:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(aet05_all, proc_data)
10. ├─chevron::run(aet05_all, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db[[dataset]], alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::pagdfrow(...)
29. │ └─base::data.frame(...)
30. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
31. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
32. └─rtables (local) .local(x, colwidths, max_width)
33. ├─base::unlist(...)
34. └─base::mapply(...)
35. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
36. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
37. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
38. ├─base::unlist(...)
39. └─base::vapply(...)
40. ├─formatters (local) FUN(X[[i]], ...)
41. └─formatters (local) FUN(X[[i]], ...)
42. └─base::vapply(...)
43. └─formatters (local) FUN(X[[i]], ...)
44. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
45. └─formatters::open_font_dev(fontspec)
── Error ('test-aet05_all.R:20:3'): aet05_all can handle some NA values ────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(aet05_all, proc_data)) at test-aet05_all.R:20:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(aet05_all, proc_data)
10. ├─chevron::run(aet05_all, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db[[dataset]], alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::pagdfrow(...)
29. │ └─base::data.frame(...)
30. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
31. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
32. └─rtables (local) .local(x, colwidths, max_width)
33. ├─base::unlist(...)
34. └─base::mapply(...)
35. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
36. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
37. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
38. ├─base::unlist(...)
39. └─base::vapply(...)
40. ├─formatters (local) FUN(X[[i]], ...)
41. └─formatters (local) FUN(X[[i]], ...)
42. └─base::vapply(...)
43. └─formatters (local) FUN(X[[i]], ...)
44. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
45. └─formatters::open_font_dev(fontspec)
── Error ('test-aet10.R:9:3'): aet10 can handle NA values ──────────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(aet10, proc_data)) at test-aet10.R:9:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(aet10, proc_data)
10. ├─chevron::run(aet10, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adae, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-aet10.R:23:3'): aet10 can handle some NA values ────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(aet10, proc_data)) at test-aet10.R:23:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(aet10, proc_data)
10. ├─chevron::run(aet10, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adae, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-cfbt01.R:5:3'): cfbt01 functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::cfbt01_main(pre_data, dataset = "advs") at test-cfbt01.R:5:3
2. └─rtables::build_table(lyt, df = adam_db[[dataset]], alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::make_row_df(...)
17. └─rtables::make_row_df(...)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-cfbt01.R:18:3'): cfbt01 can handle n = 0 and outputs NE instead of infs and NAs ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(cfbt01, proc_data, dataset = "advs")) at test-cfbt01.R:18:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(cfbt01, proc_data, dataset = "advs")
10. ├─chevron::run(cfbt01, proc_data, dataset = "advs")
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db, dataset = dataset)
14. └─rtables::build_table(lyt, df = adam_db[[dataset]], alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::make_row_df(...)
29. └─rtables::make_row_df(...)
30. └─rtables (local) .local(...)
31. ├─formatters::make_row_df(...)
32. └─rtables::make_row_df(...)
33. └─rtables (local) .local(...)
34. ├─formatters::pagdfrow(...)
35. │ └─base::data.frame(...)
36. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
37. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
38. └─rtables (local) .local(x, colwidths, max_width)
39. ├─base::unlist(...)
40. └─base::mapply(...)
41. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
42. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
43. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
44. ├─base::unlist(...)
45. └─base::vapply(...)
46. ├─formatters (local) FUN(X[[i]], ...)
47. └─formatters (local) FUN(X[[i]], ...)
48. └─base::vapply(...)
49. └─formatters (local) FUN(X[[i]], ...)
50. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
51. └─formatters::open_font_dev(fontspec)
── Error ('test-chevron_tlg-methods.R:7:3'): run works as expected for chevron_t object ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─chevron::run(aet04, syn_adv, prune_0 = TRUE) at test-chevron_tlg-methods.R:7:3
2. ├─chevron::run(aet04, syn_adv, prune_0 = TRUE)
3. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
4. │ └─base::do.call(what, new_args, envir = args_env)
5. └─chevron (local) `<fn>`(adam_db = adam_db, prune_0 = prune_0)
6. └─rtables::build_table(lyt, df = adam_db$adae, alt_counts_df = adam_db$adsl)
7. └─rtables::update_ref_indexing(tab)
8. ├─formatters::make_row_df(tt)
9. └─rtables::make_row_df(tt)
10. └─rtables (local) .local(...)
11. ├─formatters::make_row_df(...)
12. └─rtables::make_row_df(...)
13. └─rtables (local) .local(...)
14. ├─formatters::make_row_df(...)
15. └─rtables::make_row_df(...)
16. └─rtables (local) .local(...)
17. ├─formatters::make_row_df(...)
18. └─rtables::make_row_df(...)
19. └─rtables (local) .local(...)
20. ├─formatters::make_row_df(...)
21. └─rtables::make_row_df(...)
22. └─rtables (local) .local(...)
23. ├─formatters::pagdfrow(...)
24. │ └─base::data.frame(...)
25. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
27. └─rtables (local) .local(x, colwidths, max_width)
28. ├─base::unlist(...)
29. └─base::mapply(...)
30. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
31. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
33. ├─base::unlist(...)
34. └─base::vapply(...)
35. ├─formatters (local) FUN(X[[i]], ...)
36. └─formatters (local) FUN(X[[i]], ...)
37. └─base::vapply(...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
40. └─formatters::open_font_dev(fontspec)
── Error ('test-chevron_tlg-methods.R:15:3'): run works as expected for chevron_t object when auto_pre = FALSE ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─chevron::run(dmt01, proc_data, auto_pre = FALSE) at test-chevron_tlg-methods.R:15:3
2. ├─chevron::run(dmt01, proc_data, auto_pre = FALSE)
3. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
4. │ └─base::do.call(what, new_args, envir = args_env)
5. └─chevron (local) `<fn>`(adam_db = adam_db)
6. └─rtables::build_table(lyt, adam_db$adsl)
7. └─rtables::update_ref_indexing(tab)
8. ├─formatters::make_row_df(tt)
9. └─rtables::make_row_df(tt)
10. └─rtables (local) .local(...)
11. ├─formatters::make_row_df(...)
12. └─rtables::make_row_df(...)
13. └─rtables (local) .local(...)
14. ├─formatters::make_row_df(...)
15. └─rtables::make_row_df(...)
16. └─rtables (local) .local(...)
17. ├─formatters::pagdfrow(...)
18. │ └─base::data.frame(...)
19. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
20. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
21. └─rtables (local) .local(x, colwidths, max_width)
22. ├─base::unlist(...)
23. └─base::mapply(...)
24. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
25. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
26. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
27. ├─base::unlist(...)
28. └─base::vapply(...)
29. ├─formatters (local) FUN(X[[i]], ...)
30. └─formatters (local) FUN(X[[i]], ...)
31. └─base::vapply(...)
32. └─formatters (local) FUN(X[[i]], ...)
33. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
34. └─formatters::open_font_dev(fontspec)
── Error ('test-chevron_tlg-methods.R:20:3'): run works as expected with argument printed ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::capture_output(...) at test-chevron_tlg-methods.R:20:3
2. │ └─testthat::capture_output_lines(code, print, width = width)
3. │ └─testthat:::eval_with_output(code, print = print, width = width)
4. │ ├─withr::with_output_sink(path, withVisible(code))
5. │ │ └─base::force(code)
6. │ └─base::withVisible(code)
7. ├─chevron::run(aet02, syn_adv, prune_0 = TRUE, verbose = TRUE)
8. ├─chevron::run(aet02, syn_adv, prune_0 = TRUE, verbose = TRUE)
9. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
10. │ └─base::do.call(what, new_args, envir = args_env)
11. └─chevron (local) `<fn>`(adam_db = adam_db, prune_0 = prune_0)
12. └─rtables::build_table(lyt, adam_db$adae, alt_counts_df = adam_db$adsl)
13. └─rtables::update_ref_indexing(tab)
14. ├─formatters::make_row_df(tt)
15. └─rtables::make_row_df(tt)
16. └─rtables (local) .local(...)
17. ├─formatters::make_row_df(...)
18. └─rtables::make_row_df(...)
19. └─rtables (local) .local(...)
20. ├─formatters::make_row_df(...)
21. └─rtables::make_row_df(...)
22. └─rtables (local) .local(...)
23. ├─formatters::pagdfrow(...)
24. │ └─base::data.frame(...)
25. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
27. └─rtables (local) .local(x, colwidths, max_width)
28. ├─base::unlist(...)
29. └─base::mapply(...)
30. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
31. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
33. ├─base::unlist(...)
34. └─base::vapply(...)
35. ├─formatters (local) FUN(X[[i]], ...)
36. └─formatters (local) FUN(X[[i]], ...)
37. └─base::vapply(...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
40. └─formatters::open_font_dev(fontspec)
── Error ('test-chevron_tlg-methods.R:27:3'): run works as expected with argument printed if the user argument is complicated ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::capture_output(...) at test-chevron_tlg-methods.R:27:3
2. │ └─testthat::capture_output_lines(code, print, width = width)
3. │ └─testthat:::eval_with_output(code, print = print, width = width)
4. │ ├─withr::with_output_sink(path, withVisible(code))
5. │ │ └─base::force(code)
6. │ └─base::withVisible(code)
7. ├─chevron::run(aet02, syn_adv, user_args = user_args, verbose = TRUE)
8. ├─chevron::run(aet02, syn_adv, user_args = user_args, verbose = TRUE)
9. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
10. │ └─base::do.call(what, new_args, envir = args_env)
11. └─chevron (local) `<fn>`(...)
12. └─rtables::build_table(lyt, adam_db$adae, alt_counts_df = adam_db$adsl)
13. └─rtables::update_ref_indexing(tab)
14. ├─formatters::make_row_df(tt)
15. └─rtables::make_row_df(tt)
16. └─rtables (local) .local(...)
17. ├─formatters::make_row_df(...)
18. └─rtables::make_row_df(...)
19. └─rtables (local) .local(...)
20. ├─formatters::make_row_df(...)
21. └─rtables::make_row_df(...)
22. └─rtables (local) .local(...)
23. ├─formatters::pagdfrow(...)
24. │ └─base::data.frame(...)
25. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
27. └─rtables (local) .local(x, colwidths, max_width)
28. ├─base::unlist(...)
29. └─base::mapply(...)
30. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
31. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
33. ├─base::unlist(...)
34. └─base::vapply(...)
35. ├─formatters (local) FUN(X[[i]], ...)
36. └─formatters (local) FUN(X[[i]], ...)
37. └─base::vapply(...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
40. └─formatters::open_font_dev(fontspec)
── Error ('test-chevron_tlg-methods.R:34:3'): run uses the argument passed through the ellipsis in priority ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::capture_output(...) at test-chevron_tlg-methods.R:34:3
2. │ └─testthat::capture_output_lines(code, print, width = width)
3. │ └─testthat:::eval_with_output(code, print = print, width = width)
4. │ ├─withr::with_output_sink(path, withVisible(code))
5. │ │ └─base::force(code)
6. │ └─base::withVisible(code)
7. ├─chevron::run(...)
8. ├─chevron::run(...)
9. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
10. │ └─base::do.call(what, new_args, envir = args_env)
11. └─chevron (local) `<fn>`(...)
12. └─rtables::build_table(lyt, adam_db$adae, alt_counts_df = adam_db$adsl)
13. └─rtables::update_ref_indexing(tab)
14. ├─formatters::make_row_df(tt)
15. └─rtables::make_row_df(tt)
16. └─rtables (local) .local(...)
17. ├─formatters::make_row_df(...)
18. └─rtables::make_row_df(...)
19. └─rtables (local) .local(...)
20. ├─formatters::make_row_df(...)
21. └─rtables::make_row_df(...)
22. └─rtables (local) .local(...)
23. ├─formatters::pagdfrow(...)
24. │ └─base::data.frame(...)
25. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
27. └─rtables (local) .local(x, colwidths, max_width)
28. ├─base::unlist(...)
29. └─base::mapply(...)
30. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
31. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
33. ├─base::unlist(...)
34. └─base::vapply(...)
35. ├─formatters (local) FUN(X[[i]], ...)
36. └─formatters (local) FUN(X[[i]], ...)
37. └─base::vapply(...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
40. └─formatters::open_font_dev(fontspec)
── Error ('test-chevron_tlg-methods.R:50:3'): run works as expected with partial match argument ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::capture_output(...) at test-chevron_tlg-methods.R:50:3
2. │ └─testthat::capture_output_lines(code, print, width = width)
3. │ └─testthat:::eval_with_output(code, print = print, width = width)
4. │ ├─withr::with_output_sink(path, withVisible(code))
5. │ │ └─base::force(code)
6. │ └─base::withVisible(code)
7. ├─chevron::run(...)
8. ├─chevron::run(...)
9. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
10. │ └─base::do.call(what, new_args, envir = args_env)
11. └─chevron (local) `<fn>`(adam_db = adam_db, prune_0 = prune_0, arm_var = arm_var)
12. └─rtables::build_table(lyt, adam_db$adae, alt_counts_df = adam_db$adsl)
13. └─rtables::update_ref_indexing(tab)
14. ├─formatters::make_row_df(tt)
15. └─rtables::make_row_df(tt)
16. └─rtables (local) .local(...)
17. ├─formatters::make_row_df(...)
18. └─rtables::make_row_df(...)
19. └─rtables (local) .local(...)
20. ├─formatters::make_row_df(...)
21. └─rtables::make_row_df(...)
22. └─rtables (local) .local(...)
23. ├─formatters::pagdfrow(...)
24. │ └─base::data.frame(...)
25. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
27. └─rtables (local) .local(x, colwidths, max_width)
28. ├─base::unlist(...)
29. └─base::mapply(...)
30. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
31. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
33. ├─base::unlist(...)
34. └─base::vapply(...)
35. ├─formatters (local) FUN(X[[i]], ...)
36. └─formatters (local) FUN(X[[i]], ...)
37. └─base::vapply(...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
40. └─formatters::open_font_dev(fontspec)
── Error ('test-chevron_tlg-methods.R:58:3'): run displays the symbols when available ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::capture_output(...) at test-chevron_tlg-methods.R:58:3
2. │ └─testthat::capture_output_lines(code, print, width = width)
3. │ └─testthat:::eval_with_output(code, print = print, width = width)
4. │ ├─withr::with_output_sink(path, withVisible(code))
5. │ │ └─base::force(code)
6. │ └─base::withVisible(code)
7. ├─chevron::run(...)
8. ├─chevron::run(...)
9. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
10. │ └─base::do.call(what, new_args, envir = args_env)
11. └─chevron (local) `<fn>`(...)
12. └─rtables::build_table(lyt, adam_db$adae, alt_counts_df = adam_db$adsl)
13. └─rtables::update_ref_indexing(tab)
14. ├─formatters::make_row_df(tt)
15. └─rtables::make_row_df(tt)
16. └─rtables (local) .local(...)
17. ├─formatters::make_row_df(...)
18. └─rtables::make_row_df(...)
19. └─rtables (local) .local(...)
20. ├─formatters::make_row_df(...)
21. └─rtables::make_row_df(...)
22. └─rtables (local) .local(...)
23. ├─formatters::pagdfrow(...)
24. │ └─base::data.frame(...)
25. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
27. └─rtables (local) .local(x, colwidths, max_width)
28. ├─base::unlist(...)
29. └─base::mapply(...)
30. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
31. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
33. ├─base::unlist(...)
34. └─base::vapply(...)
35. ├─formatters (local) FUN(X[[i]], ...)
36. └─formatters (local) FUN(X[[i]], ...)
37. └─base::vapply(...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
40. └─formatters::open_font_dev(fontspec)
── Error ('test-chevron_tlg-methods.R:205:3'): script_funs generates a valid script ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─chevron::run(...)
2. ├─chevron::run(...)
3. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
4. │ └─base::do.call(what, new_args, envir = args_env)
5. └─chevron (local) `<fn>`(adam_db = adam_db, arm_var = arm_var)
6. └─rtables::build_table(lyt, df = adam_db$adae, alt_counts_df = adam_db$adsl)
7. └─rtables::update_ref_indexing(tab)
8. ├─formatters::make_row_df(tt)
9. └─rtables::make_row_df(tt)
10. └─rtables (local) .local(...)
11. ├─formatters::make_row_df(...)
12. └─rtables::make_row_df(...)
13. └─rtables (local) .local(...)
14. ├─formatters::make_row_df(...)
15. └─rtables::make_row_df(...)
16. └─rtables (local) .local(...)
17. ├─formatters::make_row_df(...)
18. └─rtables::make_row_df(...)
19. └─rtables (local) .local(...)
20. ├─formatters::make_row_df(...)
21. └─rtables::make_row_df(...)
22. └─rtables (local) .local(...)
23. ├─formatters::pagdfrow(...)
24. │ └─base::data.frame(...)
25. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
27. └─rtables (local) .local(x, colwidths, max_width)
28. ├─base::unlist(...)
29. └─base::mapply(...)
30. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
31. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
33. ├─base::unlist(...)
34. └─base::vapply(...)
35. ├─formatters (local) FUN(X[[i]], ...)
36. └─formatters (local) FUN(X[[i]], ...)
37. └─base::vapply(...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
40. └─formatters::open_font_dev(fontspec)
── Error ('test-cmt01a.R:5:3'): cmt01a functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::cmt01a_main(pre_data) at test-cmt01a.R:5:3
2. └─rtables::build_table(lyt, adam_db$adcm, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::pagdfrow(...)
14. │ └─base::data.frame(...)
15. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
16. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
17. └─rtables (local) .local(x, colwidths, max_width)
18. ├─base::unlist(...)
19. └─base::mapply(...)
20. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
21. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
22. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
23. ├─base::unlist(...)
24. └─base::vapply(...)
25. ├─formatters (local) FUN(X[[i]], ...)
26. └─formatters (local) FUN(X[[i]], ...)
27. └─base::vapply(...)
28. └─formatters (local) FUN(X[[i]], ...)
29. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
30. └─formatters::open_font_dev(fontspec)
── Error ('test-cmt01a.R:12:3'): cmt01a functions with custom argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::cmt01a_main(...) at test-cmt01a.R:12:3
2. └─rtables::build_table(lyt, adam_db$adcm, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::pagdfrow(...)
14. │ └─base::data.frame(...)
15. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
16. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
17. └─rtables (local) .local(x, colwidths, max_width)
18. ├─base::unlist(...)
19. └─base::mapply(...)
20. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
21. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
22. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
23. ├─base::unlist(...)
24. └─base::vapply(...)
25. ├─formatters (local) FUN(X[[i]], ...)
26. └─formatters (local) FUN(X[[i]], ...)
27. └─base::vapply(...)
28. └─formatters (local) FUN(X[[i]], ...)
29. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
30. └─formatters::open_font_dev(fontspec)
── Error ('test-cmt01a.R:32:3'): cmt01a can handle all NA values ───────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(cmt01a, proc_data)) at test-cmt01a.R:32:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(cmt01a, proc_data)
10. ├─chevron::run(cmt01a, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adcm, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-cmt01a.R:40:3'): cmt01a can handle some NA values ──────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(cmt01a, proc_data)) at test-cmt01a.R:40:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(cmt01a, proc_data)
10. ├─chevron::run(cmt01a, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adcm, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-cmt02_pt.R:8:3'): cmt02_pt can handle all NA values ────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(cmt02_pt, proc_data)) at test-cmt02_pt.R:8:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(cmt02_pt, proc_data)
10. ├─chevron::run(cmt02_pt, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adcm, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-cmt02_pt.R:16:3'): cmt02_pt can handle some NA values ──────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(cmt02_pt, proc_data)) at test-cmt02_pt.R:16:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(cmt02_pt, proc_data)
10. ├─chevron::run(cmt02_pt, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adcm, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-coxt01.R:5:3'): coxt01 can handle some NA values ───────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(coxt01, proc_data)) at test-coxt01.R:5:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(coxt01, proc_data)
10. ├─chevron::run(coxt01, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adtte)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::make_row_df(...)
29. └─rtables::make_row_df(...)
30. └─rtables (local) .local(...)
31. ├─formatters::pagdfrow(...)
32. │ └─base::data.frame(...)
33. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
34. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
35. └─rtables (local) .local(x, colwidths, max_width)
36. ├─base::unlist(...)
37. └─base::mapply(...)
38. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
39. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
40. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
41. ├─base::unlist(...)
42. └─base::vapply(...)
43. ├─formatters (local) FUN(X[[i]], ...)
44. └─formatters (local) FUN(X[[i]], ...)
45. └─base::vapply(...)
46. └─formatters (local) FUN(X[[i]], ...)
47. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
48. └─formatters::open_font_dev(fontspec)
── Error ('test-coxt02.R:4:3'): coxt02 can handle some NA values ───────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(coxt02, proc_data)) at test-coxt02.R:4:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(coxt02, proc_data)
10. ├─chevron::run(coxt02, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adtte)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::make_row_df(...)
29. └─rtables::make_row_df(...)
30. └─rtables (local) .local(...)
31. ├─formatters::pagdfrow(...)
32. │ └─base::data.frame(...)
33. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
34. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
35. └─rtables (local) .local(x, colwidths, max_width)
36. ├─base::unlist(...)
37. └─base::mapply(...)
38. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
39. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
40. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
41. ├─base::unlist(...)
42. └─base::vapply(...)
43. ├─formatters (local) FUN(X[[i]], ...)
44. └─formatters (local) FUN(X[[i]], ...)
45. └─base::vapply(...)
46. └─formatters (local) FUN(X[[i]], ...)
47. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
48. └─formatters::open_font_dev(fontspec)
── Error ('test-default_tlg.R:5:3'): ael01_nollt function with default argument value return expected result with test data ──
Error in `FUN(X[[i]], ...)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─testthat::expect_snapshot(cat(export_as_txt(res, lpp = 100))) at test-default_tlg.R:5:3
2. └─rlang::cnd_signal(state$error)
── Error ('test-default_tlg.R:10:3'): aet01 function with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::aet01_main(pre_data) at test-default_tlg.R:10:3
2. ├─base::rbind(...)
3. ├─base::rbind(...)
4. └─rtables::build_table(lyts$ae1, adam_db$adae, alt_counts_df = adam_db$adsl)
5. └─rtables::update_ref_indexing(tab)
6. ├─formatters::make_row_df(tt)
7. └─rtables::make_row_df(tt)
8. └─rtables (local) .local(...)
9. ├─formatters::make_row_df(...)
10. └─rtables::make_row_df(...)
11. └─rtables (local) .local(...)
12. ├─formatters::pagdfrow(...)
13. │ └─base::data.frame(...)
14. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
15. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
16. └─rtables (local) .local(x, colwidths, max_width)
17. ├─base::unlist(...)
18. └─base::mapply(...)
19. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
20. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
21. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
22. ├─base::unlist(...)
23. └─base::vapply(...)
24. ├─formatters (local) FUN(X[[i]], ...)
25. └─formatters (local) FUN(X[[i]], ...)
26. └─base::vapply(...)
27. └─formatters (local) FUN(X[[i]], ...)
28. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
29. └─formatters::open_font_dev(fontspec)
── Error ('test-default_tlg.R:17:3'): aet01_aesi function with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::aet01_aesi_main(pre_data) at test-default_tlg.R:17:3
2. └─rtables::build_table(lyt, adam_db$adae, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::pagdfrow(...)
14. │ └─base::data.frame(...)
15. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
16. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
17. └─rtables (local) .local(x, colwidths, max_width)
18. ├─base::unlist(...)
19. └─base::mapply(...)
20. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
21. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
22. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
23. ├─base::unlist(...)
24. └─base::vapply(...)
25. ├─formatters (local) FUN(X[[i]], ...)
26. └─formatters (local) FUN(X[[i]], ...)
27. └─base::vapply(...)
28. └─formatters (local) FUN(X[[i]], ...)
29. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
30. └─formatters::open_font_dev(fontspec)
── Error ('test-default_tlg.R:24:3'): aet02 functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::aet02_main(pre_data) at test-default_tlg.R:24:3
2. └─rtables::build_table(lyt, adam_db$adae, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::pagdfrow(...)
14. │ └─base::data.frame(...)
15. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
16. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
17. └─rtables (local) .local(x, colwidths, max_width)
18. ├─base::unlist(...)
19. └─base::mapply(...)
20. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
21. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
22. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
23. ├─base::unlist(...)
24. └─base::vapply(...)
25. ├─formatters (local) FUN(X[[i]], ...)
26. └─formatters (local) FUN(X[[i]], ...)
27. └─base::vapply(...)
28. └─formatters (local) FUN(X[[i]], ...)
29. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
30. └─formatters::open_font_dev(fontspec)
── Error ('test-default_tlg.R:31:3'): aet03 functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::aet03_main(pre_data) at test-default_tlg.R:31:3
2. └─rtables::build_table(lyt, df = adam_db$adae, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::pagdfrow(...)
14. │ └─base::data.frame(...)
15. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
16. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
17. └─rtables (local) .local(x, colwidths, max_width)
18. ├─base::unlist(...)
19. └─base::mapply(...)
20. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
21. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
22. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
23. ├─base::unlist(...)
24. └─base::vapply(...)
25. ├─formatters (local) FUN(X[[i]], ...)
26. └─formatters (local) FUN(X[[i]], ...)
27. └─base::vapply(...)
28. └─formatters (local) FUN(X[[i]], ...)
29. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
30. └─formatters::open_font_dev(fontspec)
── Error ('test-default_tlg.R:38:3'): aet04 functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::aet04_main(pre_data) at test-default_tlg.R:38:3
2. └─rtables::build_table(lyt, df = adam_db$adae, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::make_row_df(...)
17. └─rtables::make_row_df(...)
18. └─rtables (local) .local(...)
19. ├─formatters::pagdfrow(...)
20. │ └─base::data.frame(...)
21. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
22. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
23. └─rtables (local) .local(x, colwidths, max_width)
24. ├─base::unlist(...)
25. └─base::mapply(...)
26. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
27. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
28. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
29. ├─base::unlist(...)
30. └─base::vapply(...)
31. ├─formatters (local) FUN(X[[i]], ...)
32. └─formatters (local) FUN(X[[i]], ...)
33. └─base::vapply(...)
34. └─formatters (local) FUN(X[[i]], ...)
35. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
36. └─formatters::open_font_dev(fontspec)
── Error ('test-default_tlg.R:45:3'): aet05 functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::aet05_main(pre_data) at test-default_tlg.R:45:3
2. └─rtables::build_table(lyt, adam_db[[dataset]], alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::pagdfrow(...)
17. │ └─base::data.frame(...)
18. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
19. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
20. └─rtables (local) .local(x, colwidths, max_width)
21. ├─base::unlist(...)
22. └─base::mapply(...)
23. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
24. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
25. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
26. ├─base::unlist(...)
27. └─base::vapply(...)
28. ├─formatters (local) FUN(X[[i]], ...)
29. └─formatters (local) FUN(X[[i]], ...)
30. └─base::vapply(...)
31. └─formatters (local) FUN(X[[i]], ...)
32. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
33. └─formatters::open_font_dev(fontspec)
── Error ('test-default_tlg.R:52:3'): aet05_all functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::aet05_main(pre_data) at test-default_tlg.R:52:3
2. └─rtables::build_table(lyt, adam_db[[dataset]], alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::pagdfrow(...)
17. │ └─base::data.frame(...)
18. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
19. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
20. └─rtables (local) .local(x, colwidths, max_width)
21. ├─base::unlist(...)
22. └─base::mapply(...)
23. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
24. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
25. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
26. ├─base::unlist(...)
27. └─base::vapply(...)
28. ├─formatters (local) FUN(X[[i]], ...)
29. └─formatters (local) FUN(X[[i]], ...)
30. └─base::vapply(...)
31. └─formatters (local) FUN(X[[i]], ...)
32. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
33. └─formatters::open_font_dev(fontspec)
── Error ('test-default_tlg.R:59:3'): aet10 functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::aet10_main(pre_data) at test-default_tlg.R:59:3
2. └─rtables::build_table(lyt, adam_db$adae, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::pagdfrow(...)
11. │ └─base::data.frame(...)
12. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
13. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
14. └─rtables (local) .local(x, colwidths, max_width)
15. ├─base::unlist(...)
16. └─base::mapply(...)
17. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
18. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
19. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
20. ├─base::unlist(...)
21. └─base::vapply(...)
22. ├─formatters (local) FUN(X[[i]], ...)
23. └─formatters (local) FUN(X[[i]], ...)
24. └─base::vapply(...)
25. └─formatters (local) FUN(X[[i]], ...)
26. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
27. └─formatters::open_font_dev(fontspec)
── Error ('test-default_tlg.R:66:3'): cmt02_pt functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::cmt02_pt_main(pre_data) at test-default_tlg.R:66:3
2. └─rtables::build_table(lyt, adam_db$adcm, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::pagdfrow(...)
14. │ └─base::data.frame(...)
15. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
16. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
17. └─rtables (local) .local(x, colwidths, max_width)
18. ├─base::unlist(...)
19. └─base::mapply(...)
20. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
21. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
22. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
23. ├─base::unlist(...)
24. └─base::vapply(...)
25. ├─formatters (local) FUN(X[[i]], ...)
26. └─formatters (local) FUN(X[[i]], ...)
27. └─base::vapply(...)
28. └─formatters (local) FUN(X[[i]], ...)
29. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
30. └─formatters::open_font_dev(fontspec)
── Error ('test-default_tlg.R:76:3'): coxt01 functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::coxt01_main(pre_data) at test-default_tlg.R:76:3
2. └─rtables::build_table(lyt, adam_db$adtte)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::make_row_df(...)
17. └─rtables::make_row_df(...)
18. └─rtables (local) .local(...)
19. ├─formatters::pagdfrow(...)
20. │ └─base::data.frame(...)
21. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
22. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
23. └─rtables (local) .local(x, colwidths, max_width)
24. ├─base::unlist(...)
25. └─base::mapply(...)
26. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
27. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
28. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
29. ├─base::unlist(...)
30. └─base::vapply(...)
31. ├─formatters (local) FUN(X[[i]], ...)
32. └─formatters (local) FUN(X[[i]], ...)
33. └─base::vapply(...)
34. └─formatters (local) FUN(X[[i]], ...)
35. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
36. └─formatters::open_font_dev(fontspec)
── Error ('test-default_tlg.R:84:3'): coxt02 functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::coxt02_main(pre_data) at test-default_tlg.R:84:3
2. └─rtables::build_table(lyt, adam_db$adtte)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::make_row_df(...)
17. └─rtables::make_row_df(...)
18. └─rtables (local) .local(...)
19. ├─formatters::pagdfrow(...)
20. │ └─base::data.frame(...)
21. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
22. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
23. └─rtables (local) .local(x, colwidths, max_width)
24. ├─base::unlist(...)
25. └─base::mapply(...)
26. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
27. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
28. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
29. ├─base::unlist(...)
30. └─base::vapply(...)
31. ├─formatters (local) FUN(X[[i]], ...)
32. └─formatters (local) FUN(X[[i]], ...)
33. └─base::vapply(...)
34. └─formatters (local) FUN(X[[i]], ...)
35. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
36. └─formatters::open_font_dev(fontspec)
── Error ('test-default_tlg.R:91:3'): dmt01 functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::dmt01_main(pre_data) at test-default_tlg.R:91:3
2. └─rtables::build_table(lyt, adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::pagdfrow(...)
14. │ └─base::data.frame(...)
15. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
16. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
17. └─rtables (local) .local(x, colwidths, max_width)
18. ├─base::unlist(...)
19. └─base::mapply(...)
20. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
21. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
22. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
23. ├─base::unlist(...)
24. └─base::vapply(...)
25. ├─formatters (local) FUN(X[[i]], ...)
26. └─formatters (local) FUN(X[[i]], ...)
27. └─base::vapply(...)
28. └─formatters (local) FUN(X[[i]], ...)
29. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
30. └─formatters::open_font_dev(fontspec)
── Error ('test-default_tlg.R:98:3'): dst01 functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::dst01_main(pre_data) at test-default_tlg.R:98:3
2. └─rtables::build_table(lyt, adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::pagdfrow(...)
17. │ └─base::data.frame(...)
18. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
19. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
20. └─rtables (local) .local(x, colwidths, max_width)
21. ├─base::unlist(...)
22. └─base::mapply(...)
23. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
24. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
25. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
26. ├─base::unlist(...)
27. └─base::vapply(...)
28. ├─formatters (local) FUN(X[[i]], ...)
29. └─formatters (local) FUN(X[[i]], ...)
30. └─base::vapply(...)
31. └─formatters (local) FUN(X[[i]], ...)
32. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
33. └─formatters::open_font_dev(fontspec)
── Error ('test-default_tlg.R:105:3'): dtht01 functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::dtht01_main(pre_data) at test-default_tlg.R:105:3
2. └─rtables::build_table(lyt, adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::pagdfrow(...)
14. │ └─base::data.frame(...)
15. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
16. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
17. └─rtables (local) .local(x, colwidths, max_width)
18. ├─base::unlist(...)
19. └─base::mapply(...)
20. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
21. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
22. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
23. ├─base::unlist(...)
24. └─base::vapply(...)
25. ├─formatters (local) FUN(X[[i]], ...)
26. └─formatters (local) FUN(X[[i]], ...)
27. └─base::vapply(...)
28. └─formatters (local) FUN(X[[i]], ...)
29. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
30. └─formatters::open_font_dev(fontspec)
── Error ('test-dmt01.R:7:3'): dmt01 can handle NA values ──────────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(dmt01, proc_data)) at test-dmt01.R:7:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(dmt01, proc_data)
10. ├─chevron::run(dmt01, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-dmt01.R:14:3'): dmt01 can handle numeric NA values ─────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(dmt01, proc_data)) at test-dmt01.R:14:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(dmt01, proc_data)
10. ├─chevron::run(dmt01, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-dmt01.R:33:3'): dmt01 works as expected with setting default precision ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-dmt01.R:33:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(...)
10. ├─chevron::run(...)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db, summaryvars = summaryvars, precision = precision)
14. └─rtables::build_table(lyt, adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-dmt01.R:38:3'): dmt01 works as expected with auto precision settings ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-dmt01.R:38:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(...)
10. ├─chevron::run(...)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db, summaryvars = summaryvars, precision = precision)
14. └─rtables::build_table(lyt, adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-dmt01.R:43:3'): dmt01 works as expected with auto precision settings and defined precision ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-dmt01.R:43:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(...)
10. ├─chevron::run(...)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db, summaryvars = summaryvars, precision = precision)
14. └─rtables::build_table(lyt, adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-dmt01.R:48:3'): dmt01 works as expected with auto precision settings and defined precision and default ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-dmt01.R:48:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(...)
10. ├─chevron::run(...)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db, summaryvars = summaryvars, precision = precision)
14. └─rtables::build_table(lyt, adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-dmt01.R:55:3'): dmt01 works as expected with cutomized stats value ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-dmt01.R:55:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(...)
10. ├─chevron::run(...)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(...)
14. └─rtables::build_table(lyt, adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-dmt01.R:68:3'): dmt01 works as expected with empty list as stats value ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-dmt01.R:68:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(...)
10. ├─chevron::run(...)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(...)
14. └─rtables::build_table(lyt, adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-dmt01.R:81:3'): dmt01 works as expected with only one summaryvars ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(dmt01, syn_data, summaryvars = c("RACE"))) at test-dmt01.R:81:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(dmt01, syn_data, summaryvars = c("RACE"))
10. ├─chevron::run(dmt01, syn_data, summaryvars = c("RACE"))
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db, summaryvars = summaryvars)
14. └─rtables::build_table(lyt, adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-dst01.R:10:3'): dst01 works as expected when all data are NA ───
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(res <- run(dst01, proc_data, detail_vars = list())) at test-dst01.R:10:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(dst01, proc_data, detail_vars = list())
10. ├─chevron::run(dst01, proc_data, detail_vars = list())
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db, detail_vars = detail_vars)
14. └─rtables::build_table(lyt, adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-dst01.R:21:3'): dst01 can handle all NA values in DCSREAS ──────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(dst01, proc_data, detail_vars = list())) at test-dst01.R:21:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(dst01, proc_data, detail_vars = list())
10. ├─chevron::run(dst01, proc_data, detail_vars = list())
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db, detail_vars = detail_vars)
14. └─rtables::build_table(lyt, adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-dst01.R:28:3'): dst01 can handle some NA values ────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(dst01, proc_data)) at test-dst01.R:28:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(dst01, proc_data)
10. ├─chevron::run(dst01, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::pagdfrow(...)
29. │ └─base::data.frame(...)
30. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
31. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
32. └─rtables (local) .local(x, colwidths, max_width)
33. ├─base::unlist(...)
34. └─base::mapply(...)
35. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
36. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
37. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
38. ├─base::unlist(...)
39. └─base::vapply(...)
40. ├─formatters (local) FUN(X[[i]], ...)
41. └─formatters (local) FUN(X[[i]], ...)
42. └─base::vapply(...)
43. └─formatters (local) FUN(X[[i]], ...)
44. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
45. └─formatters::open_font_dev(fontspec)
── Error ('test-dst01.R:38:3'): dst01 can handle missing levels in status_var ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(dst01, proc_data, detail_vars = list())) at test-dst01.R:38:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(dst01, proc_data, detail_vars = list())
10. ├─chevron::run(dst01, proc_data, detail_vars = list())
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db, detail_vars = detail_vars)
14. └─rtables::build_table(lyt, adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-dst01.R:43:3'): dst01 can create variants ──────────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-dst01.R:43:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(...)
10. ├─chevron::run(...)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db, detail_vars = detail_vars)
14. └─rtables::build_table(lyt, adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-dst01.R:48:3'): dst01 can create variants ──────────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-dst01.R:48:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(...)
10. ├─chevron::run(...)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db, detail_vars = detail_vars)
14. └─rtables::build_table(lyt, adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::pagdfrow(...)
29. │ └─base::data.frame(...)
30. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
31. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
32. └─rtables (local) .local(x, colwidths, max_width)
33. ├─base::unlist(...)
34. └─base::mapply(...)
35. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
36. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
37. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
38. ├─base::unlist(...)
39. └─base::vapply(...)
40. ├─formatters (local) FUN(X[[i]], ...)
41. └─formatters (local) FUN(X[[i]], ...)
42. └─base::vapply(...)
43. └─formatters (local) FUN(X[[i]], ...)
44. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
45. └─formatters::open_font_dev(fontspec)
── Error ('test-dst01.R:53:3'): dst01 can create variants ──────────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-dst01.R:53:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(...)
10. ├─chevron::run(...)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db, detail_vars = detail_vars, trt_status_var = trt_status_var)
14. └─rtables::build_table(lyt, adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::pagdfrow(...)
29. │ └─base::data.frame(...)
30. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
31. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
32. └─rtables (local) .local(x, colwidths, max_width)
33. ├─base::unlist(...)
34. └─base::mapply(...)
35. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
36. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
37. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
38. ├─base::unlist(...)
39. └─base::vapply(...)
40. ├─formatters (local) FUN(X[[i]], ...)
41. └─formatters (local) FUN(X[[i]], ...)
42. └─base::vapply(...)
43. └─formatters (local) FUN(X[[i]], ...)
44. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
45. └─formatters::open_font_dev(fontspec)
── Error ('test-dtht01.R:11:3'): dtht01 can handle all NA values ───────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-dtht01.R:11:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(...)
10. ├─chevron::run(...)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(...)
14. └─rtables::build_table(lyt, adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-dtht01.R:18:3'): dtht01 can handle some NA values ──────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-dtht01.R:18:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(...)
10. ├─chevron::run(...)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(...)
14. └─rtables::build_table(lyt, adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-dtht01.R:28:3'): dtht01 can be parametrize as expected ─────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::dtht01_main(pre_data, time_since_last_dose = TRUE, other_category = TRUE) at test-dtht01.R:28:3
2. └─rtables::build_table(lyt, adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::pagdfrow(...)
14. │ └─base::data.frame(...)
15. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
16. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
17. └─rtables (local) .local(x, colwidths, max_width)
18. ├─base::unlist(...)
19. └─base::mapply(...)
20. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
21. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
22. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
23. ├─base::unlist(...)
24. └─base::vapply(...)
25. ├─formatters (local) FUN(X[[i]], ...)
26. └─formatters (local) FUN(X[[i]], ...)
27. └─base::vapply(...)
28. └─formatters (local) FUN(X[[i]], ...)
29. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
30. └─formatters::open_font_dev(fontspec)
── Error ('test-egt01.R:5:3'): egt01 functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::egt01_main(pre_data) at test-egt01.R:5:3
2. └─rtables::build_table(lyt, df = adam_db[[dataset]], alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::make_row_df(...)
17. └─rtables::make_row_df(...)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-egt01.R:17:3'): egt01 can handle n = 0 and outputs NE instead of infs and NAs ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-egt01.R:17:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(egt01, proc_data, precision = list(RR = 0, HR = 1))
10. ├─chevron::run(egt01, proc_data, precision = list(RR = 0, HR = 1))
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db, precision = precision)
14. └─rtables::build_table(lyt, df = adam_db[[dataset]], alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::make_row_df(...)
29. └─rtables::make_row_df(...)
30. └─rtables (local) .local(...)
31. ├─formatters::make_row_df(...)
32. └─rtables::make_row_df(...)
33. └─rtables (local) .local(...)
34. ├─formatters::pagdfrow(...)
35. │ └─base::data.frame(...)
36. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
37. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
38. └─rtables (local) .local(x, colwidths, max_width)
39. ├─base::unlist(...)
40. └─base::mapply(...)
41. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
42. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
43. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
44. ├─base::unlist(...)
45. └─base::vapply(...)
46. ├─formatters (local) FUN(X[[i]], ...)
47. └─formatters (local) FUN(X[[i]], ...)
48. └─base::vapply(...)
49. └─formatters (local) FUN(X[[i]], ...)
50. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
51. └─formatters::open_font_dev(fontspec)
── Error ('test-egt02.R:5:3'): egt02_1 functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::egt02_1_main(pre_data) at test-egt02.R:5:3
2. └─rtables::build_table(lyt, adam_db$adeg, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::pagdfrow(...)
17. │ └─base::data.frame(...)
18. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
19. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
20. └─rtables (local) .local(x, colwidths, max_width)
21. ├─base::unlist(...)
22. └─base::mapply(...)
23. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
24. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
25. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
26. ├─base::unlist(...)
27. └─base::vapply(...)
28. ├─formatters (local) FUN(X[[i]], ...)
29. └─formatters (local) FUN(X[[i]], ...)
30. └─base::vapply(...)
31. └─formatters (local) FUN(X[[i]], ...)
32. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
33. └─formatters::open_font_dev(fontspec)
── Error ('test-egt02.R:12:3'): egt02_2 functions with default value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::egt02_2_main(pre_data) at test-egt02.R:12:3
2. └─rtables::build_table(lyt, adam_db$adeg, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::pagdfrow(...)
17. │ └─base::data.frame(...)
18. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
19. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
20. └─rtables (local) .local(x, colwidths, max_width)
21. ├─base::unlist(...)
22. └─base::mapply(...)
23. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
24. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
25. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
26. ├─base::unlist(...)
27. └─base::vapply(...)
28. ├─formatters (local) FUN(X[[i]], ...)
29. └─formatters (local) FUN(X[[i]], ...)
30. └─base::vapply(...)
31. └─formatters (local) FUN(X[[i]], ...)
32. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
33. └─formatters::open_font_dev(fontspec)
── Error ('test-egt03.R:5:3'): egt03 functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::egt03_main(pre_data) at test-egt03.R:5:3
2. └─rtables::build_table(lyt, df = adam_db$adeg)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::make_row_df(...)
17. └─rtables::make_row_df(...)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-egt03.R:27:3'): egt03 can handle some NA values ────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(egt03, proc_data)) at test-egt03.R:27:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(egt03, proc_data)
10. ├─chevron::run(egt03, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, df = adam_db$adeg)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::make_row_df(...)
29. └─rtables::make_row_df(...)
30. └─rtables (local) .local(...)
31. ├─formatters::make_row_df(...)
32. └─rtables::make_row_df(...)
33. └─rtables (local) .local(...)
34. ├─formatters::pagdfrow(...)
35. │ └─base::data.frame(...)
36. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
37. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
38. └─rtables (local) .local(x, colwidths, max_width)
39. ├─base::unlist(...)
40. └─base::mapply(...)
41. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
42. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
43. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
44. ├─base::unlist(...)
45. └─base::vapply(...)
46. ├─formatters (local) FUN(X[[i]], ...)
47. └─formatters (local) FUN(X[[i]], ...)
48. └─base::vapply(...)
49. └─formatters (local) FUN(X[[i]], ...)
50. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
51. └─formatters::open_font_dev(fontspec)
── Error ('test-egt05_qtcat.R:5:3'): egt05_qtcat functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::egt05_qtcat_main(pre_data) at test-egt05_qtcat.R:5:3
2. └─rtables::build_table(lyt, df = adam_db$adeg, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::make_row_df(...)
17. └─rtables::make_row_df(...)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-egt05_qtcat.R:27:3'): egt05_qtcat can handle some NA values ────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(egt05_qtcat, proc_data)) at test-egt05_qtcat.R:27:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(egt05_qtcat, proc_data)
10. ├─chevron::run(egt05_qtcat, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, df = adam_db$adeg, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::make_row_df(...)
29. └─rtables::make_row_df(...)
30. └─rtables (local) .local(...)
31. ├─formatters::make_row_df(...)
32. └─rtables::make_row_df(...)
33. └─rtables (local) .local(...)
34. ├─formatters::pagdfrow(...)
35. │ └─base::data.frame(...)
36. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
37. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
38. └─rtables (local) .local(x, colwidths, max_width)
39. ├─base::unlist(...)
40. └─base::mapply(...)
41. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
42. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
43. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
44. ├─base::unlist(...)
45. └─base::vapply(...)
46. ├─formatters (local) FUN(X[[i]], ...)
47. └─formatters (local) FUN(X[[i]], ...)
48. └─base::vapply(...)
49. └─formatters (local) FUN(X[[i]], ...)
50. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
51. └─formatters::open_font_dev(fontspec)
── Error ('test-empty_report.R:19:3'): tlg functions return null reports when domain table is empty ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─chevron::run(aet01, dat_empty, prune_0 = TRUE) at test-empty_report.R:19:3
2. ├─chevron::run(aet01, dat_empty, prune_0 = TRUE)
3. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
4. │ └─base::do.call(what, new_args, envir = args_env)
5. └─chevron (local) `<fn>`(adam_db = adam_db, prune_0 = prune_0)
6. ├─base::rbind(...)
7. ├─base::rbind(...)
8. └─rtables::build_table(lyts$ae1, adam_db$adae, alt_counts_df = adam_db$adsl)
9. └─rtables::update_ref_indexing(tab)
10. ├─formatters::make_row_df(tt)
11. └─rtables::make_row_df(tt)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::pagdfrow(...)
17. │ └─base::data.frame(...)
18. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
19. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
20. └─rtables (local) .local(x, colwidths, max_width)
21. ├─base::unlist(...)
22. └─base::mapply(...)
23. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
24. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
25. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
26. ├─base::unlist(...)
27. └─base::vapply(...)
28. ├─formatters (local) FUN(X[[i]], ...)
29. └─formatters (local) FUN(X[[i]], ...)
30. └─base::vapply(...)
31. └─formatters (local) FUN(X[[i]], ...)
32. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
33. └─formatters::open_font_dev(fontspec)
── Error ('test-ext01.R:5:3'): ext01 functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::ext01_main(pre_data) at test-ext01.R:5:3
2. └─rtables::build_table(lyt, adam_db$adex, adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::make_row_df(...)
17. └─rtables::make_row_df(...)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-ext01.R:13:3'): ext01 functions with categorical data return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::ext01_main(pre_data, summaryvars = c("AVAL", "AVALCAT1")) at test-ext01.R:13:3
2. └─rtables::build_table(lyt, adam_db$adex, adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::make_row_df(...)
17. └─rtables::make_row_df(...)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-ext01.R:22:3'): ext01 works ────────────────────────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(ext01, proc_data)) at test-ext01.R:22:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(ext01, proc_data)
10. ├─chevron::run(ext01, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adex, adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::make_row_df(...)
29. └─rtables::make_row_df(...)
30. └─rtables (local) .local(...)
31. ├─formatters::make_row_df(...)
32. └─rtables::make_row_df(...)
33. └─rtables (local) .local(...)
34. ├─formatters::pagdfrow(...)
35. │ └─base::data.frame(...)
36. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
37. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
38. └─rtables (local) .local(x, colwidths, max_width)
39. ├─base::unlist(...)
40. └─base::mapply(...)
41. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
42. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
43. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
44. ├─base::unlist(...)
45. └─base::vapply(...)
46. ├─formatters (local) FUN(X[[i]], ...)
47. └─formatters (local) FUN(X[[i]], ...)
48. └─base::vapply(...)
49. └─formatters (local) FUN(X[[i]], ...)
50. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
51. └─formatters::open_font_dev(fontspec)
── Error ('test-ext01.R:35:3'): ext01 works for selected parameters and categorical variables ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─chevron::run(...) at test-ext01.R:35:3
2. ├─chevron::run(...)
3. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
4. │ └─base::do.call(what, new_args, envir = args_env)
5. └─chevron (local) `<fn>`(adam_db = adam_db, prune_0 = prune_0, summaryvars = summaryvars)
6. └─rtables::build_table(lyt, adam_db$adex, adam_db$adsl)
7. └─rtables::update_ref_indexing(tab)
8. ├─formatters::make_row_df(tt)
9. └─rtables::make_row_df(tt)
10. └─rtables (local) .local(...)
11. ├─formatters::make_row_df(...)
12. └─rtables::make_row_df(...)
13. └─rtables (local) .local(...)
14. ├─formatters::make_row_df(...)
15. └─rtables::make_row_df(...)
16. └─rtables (local) .local(...)
17. ├─formatters::make_row_df(...)
18. └─rtables::make_row_df(...)
19. └─rtables (local) .local(...)
20. ├─formatters::make_row_df(...)
21. └─rtables::make_row_df(...)
22. └─rtables (local) .local(...)
23. ├─formatters::make_row_df(...)
24. └─rtables::make_row_df(...)
25. └─rtables (local) .local(...)
26. ├─formatters::pagdfrow(...)
27. │ └─base::data.frame(...)
28. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
30. └─rtables (local) .local(x, colwidths, max_width)
31. ├─base::unlist(...)
32. └─base::mapply(...)
33. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
34. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
36. ├─base::unlist(...)
37. └─base::vapply(...)
38. ├─formatters (local) FUN(X[[i]], ...)
39. └─formatters (local) FUN(X[[i]], ...)
40. └─base::vapply(...)
41. └─formatters (local) FUN(X[[i]], ...)
42. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
43. └─formatters::open_font_dev(fontspec)
── Error ('test-ext01.R:46:3'): ext01 works with custom mapping order ──────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─chevron::run(...) at test-ext01.R:46:3
2. ├─chevron::run(...)
3. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
4. │ └─base::do.call(what, new_args, envir = args_env)
5. └─chevron (local) `<fn>`(...)
6. └─rtables::build_table(lyt, adam_db$adex, adam_db$adsl)
7. └─rtables::update_ref_indexing(tab)
8. ├─formatters::make_row_df(tt)
9. └─rtables::make_row_df(tt)
10. └─rtables (local) .local(...)
11. ├─formatters::make_row_df(...)
12. └─rtables::make_row_df(...)
13. └─rtables (local) .local(...)
14. ├─formatters::make_row_df(...)
15. └─rtables::make_row_df(...)
16. └─rtables (local) .local(...)
17. ├─formatters::make_row_df(...)
18. └─rtables::make_row_df(...)
19. └─rtables (local) .local(...)
20. ├─formatters::make_row_df(...)
21. └─rtables::make_row_df(...)
22. └─rtables (local) .local(...)
23. ├─formatters::make_row_df(...)
24. └─rtables::make_row_df(...)
25. └─rtables (local) .local(...)
26. ├─formatters::pagdfrow(...)
27. │ └─base::data.frame(...)
28. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
30. └─rtables (local) .local(x, colwidths, max_width)
31. ├─base::unlist(...)
32. └─base::mapply(...)
33. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
34. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
36. ├─base::unlist(...)
37. └─base::vapply(...)
38. ├─formatters (local) FUN(X[[i]], ...)
39. └─formatters (local) FUN(X[[i]], ...)
40. └─base::vapply(...)
41. └─formatters (local) FUN(X[[i]], ...)
42. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
43. └─formatters::open_font_dev(fontspec)
── Error ('test-ext01.R:56:3'): ext01 works with custom mapping order for a single split ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─chevron::run(...) at test-ext01.R:56:3
2. ├─chevron::run(...)
3. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
4. │ └─base::do.call(what, new_args, envir = args_env)
5. └─chevron (local) `<fn>`(...)
6. └─rtables::build_table(lyt, adam_db$adex, adam_db$adsl)
7. └─rtables::update_ref_indexing(tab)
8. ├─formatters::make_row_df(tt)
9. └─rtables::make_row_df(tt)
10. └─rtables (local) .local(...)
11. ├─formatters::make_row_df(...)
12. └─rtables::make_row_df(...)
13. └─rtables (local) .local(...)
14. ├─formatters::make_row_df(...)
15. └─rtables::make_row_df(...)
16. └─rtables (local) .local(...)
17. ├─formatters::make_row_df(...)
18. └─rtables::make_row_df(...)
19. └─rtables (local) .local(...)
20. ├─formatters::make_row_df(...)
21. └─rtables::make_row_df(...)
22. └─rtables (local) .local(...)
23. ├─formatters::make_row_df(...)
24. └─rtables::make_row_df(...)
25. └─rtables (local) .local(...)
26. ├─formatters::pagdfrow(...)
27. │ └─base::data.frame(...)
28. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
30. └─rtables (local) .local(x, colwidths, max_width)
31. ├─base::unlist(...)
32. └─base::mapply(...)
33. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
34. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
36. ├─base::unlist(...)
37. └─base::vapply(...)
38. ├─formatters (local) FUN(X[[i]], ...)
39. └─formatters (local) FUN(X[[i]], ...)
40. └─base::vapply(...)
41. └─formatters (local) FUN(X[[i]], ...)
42. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
43. └─formatters::open_font_dev(fontspec)
── Error ('test-ext01.R:67:3'): ext01 works with custom mapping fill in value ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─chevron::run(...) at test-ext01.R:67:3
2. ├─chevron::run(...)
3. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
4. │ └─base::do.call(what, new_args, envir = args_env)
5. └─chevron (local) `<fn>`(...)
6. └─rtables::build_table(lyt, adam_db$adex, adam_db$adsl)
7. └─rtables::update_ref_indexing(tab)
8. ├─formatters::make_row_df(tt)
9. └─rtables::make_row_df(tt)
10. └─rtables (local) .local(...)
11. ├─formatters::make_row_df(...)
12. └─rtables::make_row_df(...)
13. └─rtables (local) .local(...)
14. ├─formatters::make_row_df(...)
15. └─rtables::make_row_df(...)
16. └─rtables (local) .local(...)
17. ├─formatters::make_row_df(...)
18. └─rtables::make_row_df(...)
19. └─rtables (local) .local(...)
20. ├─formatters::make_row_df(...)
21. └─rtables::make_row_df(...)
22. └─rtables (local) .local(...)
23. ├─formatters::make_row_df(...)
24. └─rtables::make_row_df(...)
25. └─rtables (local) .local(...)
26. ├─formatters::pagdfrow(...)
27. │ └─base::data.frame(...)
28. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
30. └─rtables (local) .local(x, colwidths, max_width)
31. ├─base::unlist(...)
32. └─base::mapply(...)
33. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
34. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
36. ├─base::unlist(...)
37. └─base::vapply(...)
38. ├─formatters (local) FUN(X[[i]], ...)
39. └─formatters (local) FUN(X[[i]], ...)
40. └─base::vapply(...)
41. └─formatters (local) FUN(X[[i]], ...)
42. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
43. └─formatters::open_font_dev(fontspec)
── Error ('test-fstg01.R:6:3'): fstg01 works as expected ───────────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(fstg01_main(pre_data, dataset = "adrs")) at test-fstg01.R:6:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::fstg01_main(pre_data, dataset = "adrs")
10. │ └─basic_table() %>% tabulate_rsp_subgroups(df, vars = stat_var)
11. └─tern::tabulate_rsp_subgroups(., df, vars = stat_var)
12. └─rtables::build_table(lyt_prop, df = df$prop)
13. └─rtables::update_ref_indexing(tab)
14. ├─formatters::make_row_df(tt)
15. └─rtables::make_row_df(tt)
16. └─rtables (local) .local(...)
17. ├─formatters::make_row_df(...)
18. └─rtables::make_row_df(...)
19. └─rtables (local) .local(...)
20. ├─formatters::make_row_df(...)
21. └─rtables::make_row_df(...)
22. └─rtables (local) .local(...)
23. ├─formatters::make_row_df(...)
24. └─rtables::make_row_df(...)
25. └─rtables (local) .local(...)
26. ├─formatters::make_row_df(...)
27. └─rtables::make_row_df(...)
28. └─rtables (local) .local(...)
29. ├─formatters::pagdfrow(...)
30. │ └─base::data.frame(...)
31. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
32. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
33. └─rtables (local) .local(x, colwidths, max_width)
34. ├─base::unlist(...)
35. └─base::mapply(...)
36. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
37. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
38. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
39. ├─base::unlist(...)
40. └─base::vapply(...)
41. ├─formatters (local) FUN(X[[i]], ...)
42. └─formatters (local) FUN(X[[i]], ...)
43. └─base::vapply(...)
44. └─formatters (local) FUN(X[[i]], ...)
45. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
46. └─formatters::open_font_dev(fontspec)
── Error ('test-fstg01.R:15:3'): fstg01 works as expected with custom color set ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-fstg01.R:15:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(...)
10. ├─chevron::run(...)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. ├─chevron (local) `<fn>`(...)
14. │ └─basic_table() %>% tabulate_rsp_subgroups(df, vars = stat_var)
15. └─tern::tabulate_rsp_subgroups(., df, vars = stat_var)
16. └─rtables::build_table(lyt_prop, df = df$prop)
17. └─rtables::update_ref_indexing(tab)
18. ├─formatters::make_row_df(tt)
19. └─rtables::make_row_df(tt)
20. └─rtables (local) .local(...)
21. ├─formatters::make_row_df(...)
22. └─rtables::make_row_df(...)
23. └─rtables (local) .local(...)
24. ├─formatters::make_row_df(...)
25. └─rtables::make_row_df(...)
26. └─rtables (local) .local(...)
27. ├─formatters::make_row_df(...)
28. └─rtables::make_row_df(...)
29. └─rtables (local) .local(...)
30. ├─formatters::make_row_df(...)
31. └─rtables::make_row_df(...)
32. └─rtables (local) .local(...)
33. ├─formatters::pagdfrow(...)
34. │ └─base::data.frame(...)
35. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
36. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
37. └─rtables (local) .local(x, colwidths, max_width)
38. ├─base::unlist(...)
39. └─base::mapply(...)
40. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
41. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
42. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
43. ├─base::unlist(...)
44. └─base::vapply(...)
45. ├─formatters (local) FUN(X[[i]], ...)
46. └─formatters (local) FUN(X[[i]], ...)
47. └─base::vapply(...)
48. └─formatters (local) FUN(X[[i]], ...)
49. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
50. └─formatters::open_font_dev(fontspec)
── Error ('test-fstg01.R:25:3'): fstg01 works if changes are in subgroups, conf_level, and label_all ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-fstg01.R:25:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(...)
10. ├─chevron::run(...)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. ├─chevron (local) `<fn>`(...)
14. │ └─basic_table() %>% tabulate_rsp_subgroups(df, vars = stat_var)
15. └─tern::tabulate_rsp_subgroups(., df, vars = stat_var)
16. └─rtables::build_table(lyt_prop, df = df$prop)
17. └─rtables::update_ref_indexing(tab)
18. ├─formatters::make_row_df(tt)
19. └─rtables::make_row_df(tt)
20. └─rtables (local) .local(...)
21. ├─formatters::make_row_df(...)
22. └─rtables::make_row_df(...)
23. └─rtables (local) .local(...)
24. ├─formatters::make_row_df(...)
25. └─rtables::make_row_df(...)
26. └─rtables (local) .local(...)
27. ├─formatters::make_row_df(...)
28. └─rtables::make_row_df(...)
29. └─rtables (local) .local(...)
30. ├─formatters::pagdfrow(...)
31. │ └─base::data.frame(...)
32. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
33. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
34. └─rtables (local) .local(x, colwidths, max_width)
35. ├─base::unlist(...)
36. └─base::mapply(...)
37. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
38. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
39. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
40. ├─base::unlist(...)
41. └─base::vapply(...)
42. ├─formatters (local) FUN(X[[i]], ...)
43. └─formatters (local) FUN(X[[i]], ...)
44. └─base::vapply(...)
45. └─formatters (local) FUN(X[[i]], ...)
46. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
47. └─formatters::open_font_dev(fontspec)
── Error ('test-fstg01.R:41:3'): fstg01 can handle some NA values in subgroups ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-fstg01.R:41:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(fstg01, proc_data, response = c("CR", "PR"), dataset = "adrs")
10. ├─chevron::run(fstg01, proc_data, response = c("CR", "PR"), dataset = "adrs")
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. ├─chevron (local) `<fn>`(adam_db = adam_db, response = response, dataset = dataset)
14. │ └─basic_table() %>% tabulate_rsp_subgroups(df, vars = stat_var)
15. └─tern::tabulate_rsp_subgroups(., df, vars = stat_var)
16. └─rtables::build_table(lyt_prop, df = df$prop)
17. └─rtables::update_ref_indexing(tab)
18. ├─formatters::make_row_df(tt)
19. └─rtables::make_row_df(tt)
20. └─rtables (local) .local(...)
21. ├─formatters::make_row_df(...)
22. └─rtables::make_row_df(...)
23. └─rtables (local) .local(...)
24. ├─formatters::make_row_df(...)
25. └─rtables::make_row_df(...)
26. └─rtables (local) .local(...)
27. ├─formatters::make_row_df(...)
28. └─rtables::make_row_df(...)
29. └─rtables (local) .local(...)
30. ├─formatters::make_row_df(...)
31. └─rtables::make_row_df(...)
32. └─rtables (local) .local(...)
33. ├─formatters::pagdfrow(...)
34. │ └─base::data.frame(...)
35. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
36. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
37. └─rtables (local) .local(x, colwidths, max_width)
38. ├─base::unlist(...)
39. └─base::mapply(...)
40. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
41. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
42. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
43. ├─base::unlist(...)
44. └─base::vapply(...)
45. ├─formatters (local) FUN(X[[i]], ...)
46. └─formatters (local) FUN(X[[i]], ...)
47. └─base::vapply(...)
48. └─formatters (local) FUN(X[[i]], ...)
49. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
50. └─formatters::open_font_dev(fontspec)
── Error ('test-fstg02.R:6:3'): fstg02 works as expected ───────────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(fstg02_main(pre_data, dataset = "adtte")) at test-fstg02.R:6:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::fstg02_main(pre_data, dataset = "adtte")
10. │ └─basic_table() %>% ...
11. └─tern::tabulate_survival_subgroups(., df, vars = stat_var, time_unit = timeunit)
12. └─rtables::build_table(lyt_survtime, df = df$survtime)
13. └─rtables::update_ref_indexing(tab)
14. ├─formatters::make_row_df(tt)
15. └─rtables::make_row_df(tt)
16. └─rtables (local) .local(...)
17. ├─formatters::make_row_df(...)
18. └─rtables::make_row_df(...)
19. └─rtables (local) .local(...)
20. ├─formatters::make_row_df(...)
21. └─rtables::make_row_df(...)
22. └─rtables (local) .local(...)
23. ├─formatters::make_row_df(...)
24. └─rtables::make_row_df(...)
25. └─rtables (local) .local(...)
26. ├─formatters::make_row_df(...)
27. └─rtables::make_row_df(...)
28. └─rtables (local) .local(...)
29. ├─formatters::pagdfrow(...)
30. │ └─base::data.frame(...)
31. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
32. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
33. └─rtables (local) .local(x, colwidths, max_width)
34. ├─base::unlist(...)
35. └─base::mapply(...)
36. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
37. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
38. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
39. ├─base::unlist(...)
40. └─base::vapply(...)
41. ├─formatters (local) FUN(X[[i]], ...)
42. └─formatters (local) FUN(X[[i]], ...)
43. └─base::vapply(...)
44. └─formatters (local) FUN(X[[i]], ...)
45. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
46. └─formatters::open_font_dev(fontspec)
── Error ('test-fstg02.R:15:3'): fstg02 works as expected with custom color set ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-fstg02.R:15:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(fstg02, proc_data, dataset = "adtte", col = "gray")
10. ├─chevron::run(fstg02, proc_data, dataset = "adtte", col = "gray")
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. ├─chevron (local) `<fn>`(adam_db = adam_db, dataset = dataset, col = col)
14. │ └─basic_table() %>% ...
15. └─tern::tabulate_survival_subgroups(., df, vars = stat_var, time_unit = timeunit)
16. └─rtables::build_table(lyt_survtime, df = df$survtime)
17. └─rtables::update_ref_indexing(tab)
18. ├─formatters::make_row_df(tt)
19. └─rtables::make_row_df(tt)
20. └─rtables (local) .local(...)
21. ├─formatters::make_row_df(...)
22. └─rtables::make_row_df(...)
23. └─rtables (local) .local(...)
24. ├─formatters::make_row_df(...)
25. └─rtables::make_row_df(...)
26. └─rtables (local) .local(...)
27. ├─formatters::make_row_df(...)
28. └─rtables::make_row_df(...)
29. └─rtables (local) .local(...)
30. ├─formatters::make_row_df(...)
31. └─rtables::make_row_df(...)
32. └─rtables (local) .local(...)
33. ├─formatters::pagdfrow(...)
34. │ └─base::data.frame(...)
35. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
36. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
37. └─rtables (local) .local(x, colwidths, max_width)
38. ├─base::unlist(...)
39. └─base::mapply(...)
40. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
41. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
42. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
43. ├─base::unlist(...)
44. └─base::vapply(...)
45. ├─formatters (local) FUN(X[[i]], ...)
46. └─formatters (local) FUN(X[[i]], ...)
47. └─base::vapply(...)
48. └─formatters (local) FUN(X[[i]], ...)
49. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
50. └─formatters::open_font_dev(fontspec)
── Error ('test-fstg02.R:25:3'): fstg02 works if changes are in subgroups, strata_var, conf_level, and label_all ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-fstg02.R:25:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(fstg02, proc_data, subgroups = NULL, dataset = "adtte")
10. ├─chevron::run(fstg02, proc_data, subgroups = NULL, dataset = "adtte")
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. ├─chevron (local) `<fn>`(adam_db = adam_db, subgroups = subgroups, dataset = dataset)
14. │ └─basic_table() %>% ...
15. └─tern::tabulate_survival_subgroups(., df, vars = stat_var, time_unit = timeunit)
16. └─rtables::build_table(lyt_survtime, df = df$survtime)
17. └─rtables::update_ref_indexing(tab)
18. ├─formatters::make_row_df(tt)
19. └─rtables::make_row_df(tt)
20. └─rtables (local) .local(...)
21. ├─formatters::make_row_df(...)
22. └─rtables::make_row_df(...)
23. └─rtables (local) .local(...)
24. ├─formatters::make_row_df(...)
25. └─rtables::make_row_df(...)
26. └─rtables (local) .local(...)
27. ├─formatters::make_row_df(...)
28. └─rtables::make_row_df(...)
29. └─rtables (local) .local(...)
30. ├─formatters::pagdfrow(...)
31. │ └─base::data.frame(...)
32. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
33. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
34. └─rtables (local) .local(x, colwidths, max_width)
35. ├─base::unlist(...)
36. └─base::mapply(...)
37. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
38. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
39. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
40. ├─base::unlist(...)
41. └─base::vapply(...)
42. ├─formatters (local) FUN(X[[i]], ...)
43. └─formatters (local) FUN(X[[i]], ...)
44. └─base::vapply(...)
45. └─formatters (local) FUN(X[[i]], ...)
46. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
47. └─formatters::open_font_dev(fontspec)
── Error ('test-fstg02.R:41:3'): fstg02 can handle some NA values in subgroups ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(fstg02, proc_data, dataset = "adtte")) at test-fstg02.R:41:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(fstg02, proc_data, dataset = "adtte")
10. ├─chevron::run(fstg02, proc_data, dataset = "adtte")
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. ├─chevron (local) `<fn>`(adam_db = adam_db, dataset = dataset)
14. │ └─basic_table() %>% ...
15. └─tern::tabulate_survival_subgroups(., df, vars = stat_var, time_unit = timeunit)
16. └─rtables::build_table(lyt_survtime, df = df$survtime)
17. └─rtables::update_ref_indexing(tab)
18. ├─formatters::make_row_df(tt)
19. └─rtables::make_row_df(tt)
20. └─rtables (local) .local(...)
21. ├─formatters::make_row_df(...)
22. └─rtables::make_row_df(...)
23. └─rtables (local) .local(...)
24. ├─formatters::make_row_df(...)
25. └─rtables::make_row_df(...)
26. └─rtables (local) .local(...)
27. ├─formatters::make_row_df(...)
28. └─rtables::make_row_df(...)
29. └─rtables (local) .local(...)
30. ├─formatters::make_row_df(...)
31. └─rtables::make_row_df(...)
32. └─rtables (local) .local(...)
33. ├─formatters::pagdfrow(...)
34. │ └─base::data.frame(...)
35. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
36. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
37. └─rtables (local) .local(x, colwidths, max_width)
38. ├─base::unlist(...)
39. └─base::mapply(...)
40. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
41. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
42. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
43. ├─base::unlist(...)
44. └─base::vapply(...)
45. ├─formatters (local) FUN(X[[i]], ...)
46. └─formatters (local) FUN(X[[i]], ...)
47. └─base::vapply(...)
48. └─formatters (local) FUN(X[[i]], ...)
49. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
50. └─formatters::open_font_dev(fontspec)
── Error ('test-fstg02.R:55:3'): fstg02 can handle customized time units ───────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(fstg02, proc_data, dataset = "adtte")) at test-fstg02.R:55:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(fstg02, proc_data, dataset = "adtte")
10. ├─chevron::run(fstg02, proc_data, dataset = "adtte")
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. ├─chevron (local) `<fn>`(adam_db = adam_db, dataset = dataset)
14. │ └─basic_table() %>% ...
15. └─tern::tabulate_survival_subgroups(., df, vars = stat_var, time_unit = timeunit)
16. └─rtables::build_table(lyt_survtime, df = df$survtime)
17. └─rtables::update_ref_indexing(tab)
18. ├─formatters::make_row_df(tt)
19. └─rtables::make_row_df(tt)
20. └─rtables (local) .local(...)
21. ├─formatters::make_row_df(...)
22. └─rtables::make_row_df(...)
23. └─rtables (local) .local(...)
24. ├─formatters::make_row_df(...)
25. └─rtables::make_row_df(...)
26. └─rtables (local) .local(...)
27. ├─formatters::make_row_df(...)
28. └─rtables::make_row_df(...)
29. └─rtables (local) .local(...)
30. ├─formatters::make_row_df(...)
31. └─rtables::make_row_df(...)
32. └─rtables (local) .local(...)
33. ├─formatters::pagdfrow(...)
34. │ └─base::data.frame(...)
35. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
36. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
37. └─rtables (local) .local(x, colwidths, max_width)
38. ├─base::unlist(...)
39. └─base::mapply(...)
40. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
41. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
42. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
43. ├─base::unlist(...)
44. └─base::vapply(...)
45. ├─formatters (local) FUN(X[[i]], ...)
46. └─formatters (local) FUN(X[[i]], ...)
47. └─base::vapply(...)
48. └─formatters (local) FUN(X[[i]], ...)
49. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
50. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt01.R:5:3'): lbt01 functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::lbt01_main(pre_data) at test-lbt01.R:5:3
2. └─rtables::build_table(lyt, df = adam_db[[dataset]], alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::make_row_df(...)
17. └─rtables::make_row_df(...)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt01.R:14:3'): lbt01 functions with row_split_var return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::lbt01_main(pre_data, row_split_var = "LBCAT") at test-lbt01.R:14:3
2. └─rtables::build_table(lyt, df = adam_db[[dataset]], alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::make_row_df(...)
17. └─rtables::make_row_df(...)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::pagdfrow(...)
29. │ └─base::data.frame(...)
30. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
31. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
32. └─rtables (local) .local(x, colwidths, max_width)
33. ├─base::unlist(...)
34. └─base::mapply(...)
35. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
36. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
37. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
38. ├─base::unlist(...)
39. └─base::vapply(...)
40. ├─formatters (local) FUN(X[[i]], ...)
41. └─formatters (local) FUN(X[[i]], ...)
42. └─base::vapply(...)
43. └─formatters (local) FUN(X[[i]], ...)
44. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
45. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt01.R:26:3'): lbt01 can handle n = 0 and outputs NE instead of infs and NAs ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-lbt01.R:26:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(lbt01, proc_data, precision = list(ALT = 0, CRP = 1))
10. ├─chevron::run(lbt01, proc_data, precision = list(ALT = 0, CRP = 1))
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db, precision = precision)
14. └─rtables::build_table(lyt, df = adam_db[[dataset]], alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::make_row_df(...)
29. └─rtables::make_row_df(...)
30. └─rtables (local) .local(...)
31. ├─formatters::make_row_df(...)
32. └─rtables::make_row_df(...)
33. └─rtables (local) .local(...)
34. ├─formatters::pagdfrow(...)
35. │ └─base::data.frame(...)
36. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
37. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
38. └─rtables (local) .local(x, colwidths, max_width)
39. ├─base::unlist(...)
40. └─base::mapply(...)
41. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
42. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
43. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
44. ├─base::unlist(...)
45. └─base::vapply(...)
46. ├─formatters (local) FUN(X[[i]], ...)
47. └─formatters (local) FUN(X[[i]], ...)
48. └─base::vapply(...)
49. └─formatters (local) FUN(X[[i]], ...)
50. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
51. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt04.R:5:3'): lbt04 functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::lbt04_main(pre_data) at test-lbt04.R:5:3
2. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::make_row_df(...)
17. └─rtables::make_row_df(...)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt04.R:20:3'): lbt04 can handle all NA values ─────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─testthat::expect_snapshot(cat(export_as_txt(res, lpp = 100))) at test-lbt04.R:20:3
2. └─rlang::cnd_signal(state$error)
── Error ('test-lbt04.R:30:3'): lbt04 can handle missing levels ────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(lbt04, proc_data)) at test-lbt04.R:30:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(lbt04, proc_data)
10. ├─chevron::run(lbt04, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::make_row_df(...)
29. └─rtables::make_row_df(...)
30. └─rtables (local) .local(...)
31. ├─formatters::make_row_df(...)
32. └─rtables::make_row_df(...)
33. └─rtables (local) .local(...)
34. ├─formatters::pagdfrow(...)
35. │ └─base::data.frame(...)
36. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
37. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
38. └─rtables (local) .local(x, colwidths, max_width)
39. ├─base::unlist(...)
40. └─base::mapply(...)
41. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
42. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
43. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
44. ├─base::unlist(...)
45. └─base::vapply(...)
46. ├─formatters (local) FUN(X[[i]], ...)
47. └─formatters (local) FUN(X[[i]], ...)
48. └─base::vapply(...)
49. └─formatters (local) FUN(X[[i]], ...)
50. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
51. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt04.R:38:3'): lbt04 can handle some NA values ────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(lbt04, proc_data)) at test-lbt04.R:38:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(lbt04, proc_data)
10. ├─chevron::run(lbt04, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::make_row_df(...)
29. └─rtables::make_row_df(...)
30. └─rtables (local) .local(...)
31. ├─formatters::make_row_df(...)
32. └─rtables::make_row_df(...)
33. └─rtables (local) .local(...)
34. ├─formatters::pagdfrow(...)
35. │ └─base::data.frame(...)
36. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
37. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
38. └─rtables (local) .local(x, colwidths, max_width)
39. ├─base::unlist(...)
40. └─base::mapply(...)
41. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
42. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
43. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
44. ├─base::unlist(...)
45. └─base::vapply(...)
46. ├─formatters (local) FUN(X[[i]], ...)
47. └─formatters (local) FUN(X[[i]], ...)
48. └─base::vapply(...)
49. └─formatters (local) FUN(X[[i]], ...)
50. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
51. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt05.R:5:3'): lbt05 functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::lbt05_main(pre_data) at test-lbt05.R:5:3
2. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::pagdfrow(...)
17. │ └─base::data.frame(...)
18. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
19. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
20. └─rtables (local) .local(x, colwidths, max_width)
21. ├─base::unlist(...)
22. └─base::mapply(...)
23. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
24. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
25. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
26. ├─base::unlist(...)
27. └─base::vapply(...)
28. ├─formatters (local) FUN(X[[i]], ...)
29. └─formatters (local) FUN(X[[i]], ...)
30. └─base::vapply(...)
31. └─formatters (local) FUN(X[[i]], ...)
32. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
33. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt05.R:21:3'): lbt05 give all 0 count if ANRIND are all missing ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─chevron::run(lbt05, proc_data) at test-lbt05.R:21:3
2. ├─chevron::run(lbt05, proc_data)
3. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
4. │ └─base::do.call(what, new_args, envir = args_env)
5. └─chevron (local) `<fn>`(adam_db = adam_db)
6. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
7. └─rtables::update_ref_indexing(tab)
8. ├─formatters::make_row_df(tt)
9. └─rtables::make_row_df(tt)
10. └─rtables (local) .local(...)
11. ├─formatters::make_row_df(...)
12. └─rtables::make_row_df(...)
13. └─rtables (local) .local(...)
14. ├─formatters::make_row_df(...)
15. └─rtables::make_row_df(...)
16. └─rtables (local) .local(...)
17. ├─formatters::make_row_df(...)
18. └─rtables::make_row_df(...)
19. └─rtables (local) .local(...)
20. ├─formatters::pagdfrow(...)
21. │ └─base::data.frame(...)
22. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
23. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
24. └─rtables (local) .local(x, colwidths, max_width)
25. ├─base::unlist(...)
26. └─base::mapply(...)
27. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
28. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
29. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
30. ├─base::unlist(...)
31. └─base::vapply(...)
32. ├─formatters (local) FUN(X[[i]], ...)
33. └─formatters (local) FUN(X[[i]], ...)
34. └─base::vapply(...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
37. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt05.R:35:3'): lbt05 can handle some NA values ────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(lbt05, proc_data)) at test-lbt05.R:35:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(lbt05, proc_data)
10. ├─chevron::run(lbt05, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::pagdfrow(...)
29. │ └─base::data.frame(...)
30. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
31. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
32. └─rtables (local) .local(x, colwidths, max_width)
33. ├─base::unlist(...)
34. └─base::mapply(...)
35. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
36. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
37. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
38. ├─base::unlist(...)
39. └─base::vapply(...)
40. ├─formatters (local) FUN(X[[i]], ...)
41. └─formatters (local) FUN(X[[i]], ...)
42. └─base::vapply(...)
43. └─formatters (local) FUN(X[[i]], ...)
44. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
45. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt06.R:9:3'): lbt06 gives all 0 count if ANRIND and BNRIND are all missing ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::lbt06_main(df_pre) at test-lbt06.R:9:3
2. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::make_row_df(...)
17. └─rtables::make_row_df(...)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt06.R:18:3'): lbt06 can handle some NA values ────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::lbt06_main(df_pre) at test-lbt06.R:18:3
2. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::make_row_df(...)
17. └─rtables::make_row_df(...)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt07.R:5:3'): lbt07 functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::lbt07_main(pre_data) at test-lbt07.R:5:3
2. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::pagdfrow(...)
17. │ └─base::data.frame(...)
18. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
19. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
20. └─rtables (local) .local(x, colwidths, max_width)
21. ├─base::unlist(...)
22. └─base::mapply(...)
23. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
24. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
25. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
26. ├─base::unlist(...)
27. └─base::vapply(...)
28. ├─formatters (local) FUN(X[[i]], ...)
29. └─formatters (local) FUN(X[[i]], ...)
30. └─base::vapply(...)
31. └─formatters (local) FUN(X[[i]], ...)
32. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
33. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt07.R:21:3'): lbt07 can handle some NA values ────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(lbt07, proc_data)) at test-lbt07.R:21:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(lbt07, proc_data)
10. ├─chevron::run(lbt07, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::pagdfrow(...)
29. │ └─base::data.frame(...)
30. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
31. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
32. └─rtables (local) .local(x, colwidths, max_width)
33. ├─base::unlist(...)
34. └─base::mapply(...)
35. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
36. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
37. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
38. ├─base::unlist(...)
39. └─base::vapply(...)
40. ├─formatters (local) FUN(X[[i]], ...)
41. └─formatters (local) FUN(X[[i]], ...)
42. └─base::vapply(...)
43. └─formatters (local) FUN(X[[i]], ...)
44. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
45. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt14.R:9:3'): lbt14 functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::lbt14_main(pre_data) at test-lbt14.R:9:3
2. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::make_row_df(...)
17. └─rtables::make_row_df(...)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt14.R:16:3'): lbt14 functions with default argument value return expected result with test data when direction = high ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::lbt14_main(pre_data, direction = "high") at test-lbt14.R:16:3
2. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::make_row_df(...)
17. └─rtables::make_row_df(...)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt14.R:23:3'): lbt14 functions with `gr_missing = excl` return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::lbt14_main(pre_data) at test-lbt14.R:23:3
2. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::make_row_df(...)
17. └─rtables::make_row_df(...)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt14.R:30:3'): lbt14 functions with `gr_missing = gr_0` return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::lbt14_main(pre_data) at test-lbt14.R:30:3
2. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::make_row_df(...)
17. └─rtables::make_row_df(...)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt14.R:44:3'): lbt14 can handle all NA values ─────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(lbt14, proc_data)) at test-lbt14.R:44:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(lbt14, proc_data)
10. ├─chevron::run(lbt14, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::make_row_df(...)
29. └─rtables::make_row_df(...)
30. └─rtables (local) .local(...)
31. ├─formatters::make_row_df(...)
32. └─rtables::make_row_df(...)
33. └─rtables (local) .local(...)
34. ├─formatters::pagdfrow(...)
35. │ └─base::data.frame(...)
36. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
37. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
38. └─rtables (local) .local(x, colwidths, max_width)
39. ├─base::unlist(...)
40. └─base::mapply(...)
41. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
42. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
43. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
44. ├─base::unlist(...)
45. └─base::vapply(...)
46. ├─formatters (local) FUN(X[[i]], ...)
47. └─formatters (local) FUN(X[[i]], ...)
48. └─base::vapply(...)
49. └─formatters (local) FUN(X[[i]], ...)
50. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
51. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt14.R:63:3'): lbt14 can handle some NA values ────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(lbt14, proc_data)) at test-lbt14.R:63:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(lbt14, proc_data)
10. ├─chevron::run(lbt14, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::make_row_df(...)
29. └─rtables::make_row_df(...)
30. └─rtables (local) .local(...)
31. ├─formatters::make_row_df(...)
32. └─rtables::make_row_df(...)
33. └─rtables (local) .local(...)
34. ├─formatters::pagdfrow(...)
35. │ └─base::data.frame(...)
36. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
37. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
38. └─rtables (local) .local(x, colwidths, max_width)
39. ├─base::unlist(...)
40. └─base::mapply(...)
41. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
42. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
43. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
44. ├─base::unlist(...)
45. └─base::vapply(...)
46. ├─formatters (local) FUN(X[[i]], ...)
47. └─formatters (local) FUN(X[[i]], ...)
48. └─base::vapply(...)
49. └─formatters (local) FUN(X[[i]], ...)
50. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
51. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt14.R:68:3'): lbt14 can accept different gr_missing ──────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─chevron::run(lbt14, syn_lab, gr_missing = "incl") at test-lbt14.R:68:3
2. ├─chevron::run(lbt14, syn_lab, gr_missing = "incl")
3. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
4. │ └─base::do.call(what, new_args, envir = args_env)
5. └─chevron (local) `<fn>`(adam_db = adam_db, gr_missing = gr_missing)
6. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
7. └─rtables::update_ref_indexing(tab)
8. ├─formatters::make_row_df(tt)
9. └─rtables::make_row_df(tt)
10. └─rtables (local) .local(...)
11. ├─formatters::make_row_df(...)
12. └─rtables::make_row_df(...)
13. └─rtables (local) .local(...)
14. ├─formatters::make_row_df(...)
15. └─rtables::make_row_df(...)
16. └─rtables (local) .local(...)
17. ├─formatters::make_row_df(...)
18. └─rtables::make_row_df(...)
19. └─rtables (local) .local(...)
20. ├─formatters::make_row_df(...)
21. └─rtables::make_row_df(...)
22. └─rtables (local) .local(...)
23. ├─formatters::make_row_df(...)
24. └─rtables::make_row_df(...)
25. └─rtables (local) .local(...)
26. ├─formatters::pagdfrow(...)
27. │ └─base::data.frame(...)
28. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
30. └─rtables (local) .local(x, colwidths, max_width)
31. ├─base::unlist(...)
32. └─base::mapply(...)
33. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
34. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
36. ├─base::unlist(...)
37. └─base::vapply(...)
38. ├─formatters (local) FUN(X[[i]], ...)
39. └─formatters (local) FUN(X[[i]], ...)
40. └─base::vapply(...)
41. └─formatters (local) FUN(X[[i]], ...)
42. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
43. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt14.R:95:3'): lbt14 can handle all NA values with direction = high ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(lbt14, proc_data, direction = "high")) at test-lbt14.R:95:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(lbt14, proc_data, direction = "high")
10. ├─chevron::run(lbt14, proc_data, direction = "high")
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db, direction = direction)
14. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::make_row_df(...)
29. └─rtables::make_row_df(...)
30. └─rtables (local) .local(...)
31. ├─formatters::make_row_df(...)
32. └─rtables::make_row_df(...)
33. └─rtables (local) .local(...)
34. ├─formatters::pagdfrow(...)
35. │ └─base::data.frame(...)
36. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
37. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
38. └─rtables (local) .local(x, colwidths, max_width)
39. ├─base::unlist(...)
40. └─base::mapply(...)
41. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
42. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
43. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
44. ├─base::unlist(...)
45. └─base::vapply(...)
46. ├─formatters (local) FUN(X[[i]], ...)
47. └─formatters (local) FUN(X[[i]], ...)
48. └─base::vapply(...)
49. └─formatters (local) FUN(X[[i]], ...)
50. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
51. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt14.R:114:3'): lbt14 can handle some NA values with direction = high ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(lbt14, proc_data, direction = "high")) at test-lbt14.R:114:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(lbt14, proc_data, direction = "high")
10. ├─chevron::run(lbt14, proc_data, direction = "high")
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db, direction = direction)
14. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::make_row_df(...)
29. └─rtables::make_row_df(...)
30. └─rtables (local) .local(...)
31. ├─formatters::make_row_df(...)
32. └─rtables::make_row_df(...)
33. └─rtables (local) .local(...)
34. ├─formatters::pagdfrow(...)
35. │ └─base::data.frame(...)
36. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
37. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
38. └─rtables (local) .local(x, colwidths, max_width)
39. ├─base::unlist(...)
40. └─base::mapply(...)
41. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
42. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
43. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
44. ├─base::unlist(...)
45. └─base::vapply(...)
46. ├─formatters (local) FUN(X[[i]], ...)
47. └─formatters (local) FUN(X[[i]], ...)
48. └─base::vapply(...)
49. └─formatters (local) FUN(X[[i]], ...)
50. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
51. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt14.R:120:3'): lbt14 can accept different gr_missing with direction = high ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─chevron::run(lbt14, proc_data, gr_missing = "incl", direction = "high") at test-lbt14.R:120:3
2. ├─chevron::run(lbt14, proc_data, gr_missing = "incl", direction = "high")
3. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
4. │ └─base::do.call(what, new_args, envir = args_env)
5. └─chevron (local) `<fn>`(adam_db = adam_db, gr_missing = gr_missing, direction = direction)
6. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
7. └─rtables::update_ref_indexing(tab)
8. ├─formatters::make_row_df(tt)
9. └─rtables::make_row_df(tt)
10. └─rtables (local) .local(...)
11. ├─formatters::make_row_df(...)
12. └─rtables::make_row_df(...)
13. └─rtables (local) .local(...)
14. ├─formatters::make_row_df(...)
15. └─rtables::make_row_df(...)
16. └─rtables (local) .local(...)
17. ├─formatters::make_row_df(...)
18. └─rtables::make_row_df(...)
19. └─rtables (local) .local(...)
20. ├─formatters::make_row_df(...)
21. └─rtables::make_row_df(...)
22. └─rtables (local) .local(...)
23. ├─formatters::make_row_df(...)
24. └─rtables::make_row_df(...)
25. └─rtables (local) .local(...)
26. ├─formatters::pagdfrow(...)
27. │ └─base::data.frame(...)
28. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
30. └─rtables (local) .local(x, colwidths, max_width)
31. ├─base::unlist(...)
32. └─base::mapply(...)
33. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
34. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
36. ├─base::unlist(...)
37. └─base::vapply(...)
38. ├─formatters (local) FUN(X[[i]], ...)
39. └─formatters (local) FUN(X[[i]], ...)
40. └─base::vapply(...)
41. └─formatters (local) FUN(X[[i]], ...)
42. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
43. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt15.R:5:3'): lbt15 functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::lbt04_main(pre_data) at test-lbt15.R:5:3
2. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::make_row_df(...)
17. └─rtables::make_row_df(...)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt15.R:19:3'): lbt15 can handle all NA values ─────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(lbt15, proc_data)) at test-lbt15.R:19:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(lbt15, proc_data)
10. ├─chevron::run(lbt15, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::make_row_df(...)
29. └─rtables::make_row_df(...)
30. └─rtables (local) .local(...)
31. ├─formatters::make_row_df(...)
32. └─rtables::make_row_df(...)
33. └─rtables (local) .local(...)
34. ├─formatters::pagdfrow(...)
35. │ └─base::data.frame(...)
36. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
37. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
38. └─rtables (local) .local(x, colwidths, max_width)
39. ├─base::unlist(...)
40. └─base::mapply(...)
41. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
42. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
43. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
44. ├─base::unlist(...)
45. └─base::vapply(...)
46. ├─formatters (local) FUN(X[[i]], ...)
47. └─formatters (local) FUN(X[[i]], ...)
48. └─base::vapply(...)
49. └─formatters (local) FUN(X[[i]], ...)
50. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
51. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt15.R:30:3'): lbt15 can handle missing levels ────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(lbt15, proc_data)) at test-lbt15.R:30:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(lbt15, proc_data)
10. ├─chevron::run(lbt15, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::make_row_df(...)
29. └─rtables::make_row_df(...)
30. └─rtables (local) .local(...)
31. ├─formatters::make_row_df(...)
32. └─rtables::make_row_df(...)
33. └─rtables (local) .local(...)
34. ├─formatters::pagdfrow(...)
35. │ └─base::data.frame(...)
36. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
37. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
38. └─rtables (local) .local(x, colwidths, max_width)
39. ├─base::unlist(...)
40. └─base::mapply(...)
41. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
42. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
43. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
44. ├─base::unlist(...)
45. └─base::vapply(...)
46. ├─formatters (local) FUN(X[[i]], ...)
47. └─formatters (local) FUN(X[[i]], ...)
48. └─base::vapply(...)
49. └─formatters (local) FUN(X[[i]], ...)
50. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
51. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt15.R:41:3'): lbt15 can handle missing levels in baseline ────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(lbt15, proc_data)) at test-lbt15.R:41:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(lbt15, proc_data)
10. ├─chevron::run(lbt15, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::make_row_df(...)
29. └─rtables::make_row_df(...)
30. └─rtables (local) .local(...)
31. ├─formatters::make_row_df(...)
32. └─rtables::make_row_df(...)
33. └─rtables (local) .local(...)
34. ├─formatters::pagdfrow(...)
35. │ └─base::data.frame(...)
36. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
37. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
38. └─rtables (local) .local(x, colwidths, max_width)
39. ├─base::unlist(...)
40. └─base::mapply(...)
41. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
42. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
43. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
44. ├─base::unlist(...)
45. └─base::vapply(...)
46. ├─formatters (local) FUN(X[[i]], ...)
47. └─formatters (local) FUN(X[[i]], ...)
48. └─base::vapply(...)
49. └─formatters (local) FUN(X[[i]], ...)
50. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
51. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt15.R:49:3'): lbt15 can handle some NA values ────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(lbt15, proc_data)) at test-lbt15.R:49:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(lbt15, proc_data)
10. ├─chevron::run(lbt15, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::make_row_df(...)
29. └─rtables::make_row_df(...)
30. └─rtables (local) .local(...)
31. ├─formatters::make_row_df(...)
32. └─rtables::make_row_df(...)
33. └─rtables (local) .local(...)
34. ├─formatters::pagdfrow(...)
35. │ └─base::data.frame(...)
36. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
37. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
38. └─rtables (local) .local(x, colwidths, max_width)
39. ├─base::unlist(...)
40. └─base::mapply(...)
41. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
42. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
43. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
44. ├─base::unlist(...)
45. └─base::vapply(...)
46. ├─formatters (local) FUN(X[[i]], ...)
47. └─formatters (local) FUN(X[[i]], ...)
48. └─base::vapply(...)
49. └─formatters (local) FUN(X[[i]], ...)
50. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
51. └─formatters::open_font_dev(fontspec)
── Error ('test-lbt15.R:57:3'): lbt15 can handle some NA values in baseline ────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(lbt15, proc_data)) at test-lbt15.R:57:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(lbt15, proc_data)
10. ├─chevron::run(lbt15, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adlb, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::make_row_df(...)
29. └─rtables::make_row_df(...)
30. └─rtables (local) .local(...)
31. ├─formatters::make_row_df(...)
32. └─rtables::make_row_df(...)
33. └─rtables (local) .local(...)
34. ├─formatters::pagdfrow(...)
35. │ └─base::data.frame(...)
36. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
37. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
38. └─rtables (local) .local(x, colwidths, max_width)
39. ├─base::unlist(...)
40. └─base::mapply(...)
41. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
42. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
43. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
44. ├─base::unlist(...)
45. └─base::vapply(...)
46. ├─formatters (local) FUN(X[[i]], ...)
47. └─formatters (local) FUN(X[[i]], ...)
48. └─base::vapply(...)
49. └─formatters (local) FUN(X[[i]], ...)
50. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
51. └─formatters::open_font_dev(fontspec)
── Error ('test-mht01.R:5:3'): mht01 functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::mht01_main(pre_data) at test-mht01.R:5:3
2. └─rtables::build_table(lyt, adam_db$admh, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::pagdfrow(...)
14. │ └─base::data.frame(...)
15. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
16. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
17. └─rtables (local) .local(x, colwidths, max_width)
18. ├─base::unlist(...)
19. └─base::mapply(...)
20. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
21. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
22. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
23. ├─base::unlist(...)
24. └─base::vapply(...)
25. ├─formatters (local) FUN(X[[i]], ...)
26. └─formatters (local) FUN(X[[i]], ...)
27. └─base::vapply(...)
28. └─formatters (local) FUN(X[[i]], ...)
29. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
30. └─formatters::open_font_dev(fontspec)
── Error ('test-mht01.R:14:3'): mht01 works ────────────────────────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─chevron::run(mht01, proc_data) at test-mht01.R:14:3
2. ├─chevron::run(mht01, proc_data)
3. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
4. │ └─base::do.call(what, new_args, envir = args_env)
5. └─chevron (local) `<fn>`(adam_db = adam_db)
6. └─rtables::build_table(lyt, adam_db$admh, alt_counts_df = adam_db$adsl)
7. └─rtables::update_ref_indexing(tab)
8. ├─formatters::make_row_df(tt)
9. └─rtables::make_row_df(tt)
10. └─rtables (local) .local(...)
11. ├─formatters::make_row_df(...)
12. └─rtables::make_row_df(...)
13. └─rtables (local) .local(...)
14. ├─formatters::make_row_df(...)
15. └─rtables::make_row_df(...)
16. └─rtables (local) .local(...)
17. ├─formatters::pagdfrow(...)
18. │ └─base::data.frame(...)
19. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
20. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
21. └─rtables (local) .local(x, colwidths, max_width)
22. ├─base::unlist(...)
23. └─base::mapply(...)
24. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
25. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
26. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
27. ├─base::unlist(...)
28. └─base::vapply(...)
29. ├─formatters (local) FUN(X[[i]], ...)
30. └─formatters (local) FUN(X[[i]], ...)
31. └─base::vapply(...)
32. └─formatters (local) FUN(X[[i]], ...)
33. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
34. └─formatters::open_font_dev(fontspec)
── Error ('test-mht01.R:20:3'): mht01 works on NULL in lbl_mhbodsys or lbl_mhdecod ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─chevron::run(mht01, proc_data, lbl_mhbodsys = NULL, lbl_mhdecod = NULL) at test-mht01.R:20:3
2. ├─chevron::run(mht01, proc_data, lbl_mhbodsys = NULL, lbl_mhdecod = NULL)
3. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
4. │ └─base::do.call(what, new_args, envir = args_env)
5. └─chevron (local) `<fn>`(adam_db = adam_db, lbl_mhbodsys = lbl_mhbodsys, lbl_mhdecod = lbl_mhdecod)
6. └─rtables::build_table(lyt, adam_db$admh, alt_counts_df = adam_db$adsl)
7. └─rtables::update_ref_indexing(tab)
8. ├─formatters::make_row_df(tt)
9. └─rtables::make_row_df(tt)
10. └─rtables (local) .local(...)
11. ├─formatters::make_row_df(...)
12. └─rtables::make_row_df(...)
13. └─rtables (local) .local(...)
14. ├─formatters::make_row_df(...)
15. └─rtables::make_row_df(...)
16. └─rtables (local) .local(...)
17. ├─formatters::pagdfrow(...)
18. │ └─base::data.frame(...)
19. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
20. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
21. └─rtables (local) .local(x, colwidths, max_width)
22. ├─base::unlist(...)
23. └─base::mapply(...)
24. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
25. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
26. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
27. ├─base::unlist(...)
28. └─base::vapply(...)
29. ├─formatters (local) FUN(X[[i]], ...)
30. └─formatters (local) FUN(X[[i]], ...)
31. └─base::vapply(...)
32. └─formatters (local) FUN(X[[i]], ...)
33. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
34. └─formatters::open_font_dev(fontspec)
── Error ('test-pdt01.R:5:3'): pdt01 function with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::pdt01_main(pre_data) at test-pdt01.R:5:3
2. └─rtables::build_table(lyt, adam_db$addv, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::pagdfrow(...)
14. │ └─base::data.frame(...)
15. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
16. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
17. └─rtables (local) .local(x, colwidths, max_width)
18. ├─base::unlist(...)
19. └─base::mapply(...)
20. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
21. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
22. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
23. ├─base::unlist(...)
24. └─base::vapply(...)
25. ├─formatters (local) FUN(X[[i]], ...)
26. └─formatters (local) FUN(X[[i]], ...)
27. └─base::vapply(...)
28. └─formatters (local) FUN(X[[i]], ...)
29. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
30. └─formatters::open_font_dev(fontspec)
── Error ('test-pdt01.R:20:3'): pdt01 can handle all NA values ─────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(pdt01, proc_data)) at test-pdt01.R:20:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(pdt01, proc_data)
10. ├─chevron::run(pdt01, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$addv, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-pdt01.R:35:3'): pdt01 can handle some NA values ────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(pdt01, proc_data)) at test-pdt01.R:35:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(pdt01, proc_data)
10. ├─chevron::run(pdt01, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$addv, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-pdt02.R:5:3'): pdt02 function with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::pdt02_main(pre_data) at test-pdt02.R:5:3
2. └─rtables::build_table(lyt, adam_db$addv, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::pagdfrow(...)
14. │ └─base::data.frame(...)
15. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
16. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
17. └─rtables (local) .local(x, colwidths, max_width)
18. ├─base::unlist(...)
19. └─base::mapply(...)
20. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
21. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
22. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
23. ├─base::unlist(...)
24. └─base::vapply(...)
25. ├─formatters (local) FUN(X[[i]], ...)
26. └─formatters (local) FUN(X[[i]], ...)
27. └─base::vapply(...)
28. └─formatters (local) FUN(X[[i]], ...)
29. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
30. └─formatters::open_font_dev(fontspec)
── Error ('test-pdt02.R:20:3'): pdt02 can handle all NA values ─────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(pdt02, proc_data)) at test-pdt02.R:20:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(pdt02, proc_data)
10. ├─chevron::run(pdt02, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$addv, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-pdt02.R:35:3'): pdt02 can handle some NA values ────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(pdt02, proc_data)) at test-pdt02.R:35:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(pdt02, proc_data)
10. ├─chevron::run(pdt02, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$addv, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-rmpt01.R:5:3'): rmpt01 function with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::rmpt01_main(pre_data) at test-rmpt01.R:5:3
2. └─rtables::build_table(lyt, adam_db$adex, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::pagdfrow(...)
11. │ └─base::data.frame(...)
12. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
13. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
14. └─rtables (local) .local(x, colwidths, max_width)
15. ├─base::unlist(...)
16. └─base::mapply(...)
17. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
18. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
19. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
20. ├─base::unlist(...)
21. └─base::vapply(...)
22. ├─formatters (local) FUN(X[[i]], ...)
23. └─formatters (local) FUN(X[[i]], ...)
24. └─base::vapply(...)
25. └─formatters (local) FUN(X[[i]], ...)
26. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
27. └─formatters::open_font_dev(fontspec)
── Error ('test-rmpt01.R:16:3'): rmpt01 can handle NA values ───────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(rmpt01, proc_data)) at test-rmpt01.R:16:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(rmpt01, proc_data)
10. ├─chevron::run(rmpt01, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adex, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-rmpt01.R:30:3'): rmpt01 can handle some NA values ──────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(rmpt01, proc_data)) at test-rmpt01.R:30:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(rmpt01, proc_data)
10. ├─chevron::run(rmpt01, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adex, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-rmpt03.R:8:3'): rmpt03 function with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::rmpt03_main(pre_data) at test-rmpt03.R:8:3
2. └─rtables::build_table(lyt, adam_db$adex, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::pagdfrow(...)
11. │ └─base::data.frame(...)
12. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
13. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
14. └─rtables (local) .local(x, colwidths, max_width)
15. ├─base::unlist(...)
16. └─base::mapply(...)
17. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
18. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
19. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
20. ├─base::unlist(...)
21. └─base::vapply(...)
22. ├─formatters (local) FUN(X[[i]], ...)
23. └─formatters (local) FUN(X[[i]], ...)
24. └─base::vapply(...)
25. └─formatters (local) FUN(X[[i]], ...)
26. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
27. └─formatters::open_font_dev(fontspec)
── Error ('test-rmpt03.R:21:3'): rmpt03 can handle NA values ───────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(rmpt03, proc_data)) at test-rmpt03.R:21:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(rmpt03, proc_data)
10. ├─chevron::run(rmpt03, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adex, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-rmpt03.R:37:3'): rmpt03 can handle some NA values ──────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(rmpt03, proc_data)) at test-rmpt03.R:37:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(rmpt03, proc_data)
10. ├─chevron::run(rmpt03, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adex, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-rmpt04.R:5:3'): rmpt04 function with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::rmpt04_main(pre_data) at test-rmpt04.R:5:3
2. └─rtables::build_table(lyt, adam_db$adex, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::pagdfrow(...)
11. │ └─base::data.frame(...)
12. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
13. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
14. └─rtables (local) .local(x, colwidths, max_width)
15. ├─base::unlist(...)
16. └─base::mapply(...)
17. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
18. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
19. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
20. ├─base::unlist(...)
21. └─base::vapply(...)
22. ├─formatters (local) FUN(X[[i]], ...)
23. └─formatters (local) FUN(X[[i]], ...)
24. └─base::vapply(...)
25. └─formatters (local) FUN(X[[i]], ...)
26. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
27. └─formatters::open_font_dev(fontspec)
── Error ('test-rmpt04.R:16:3'): rmpt04 can handle NA values ───────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(rmpt04, proc_data)) at test-rmpt04.R:16:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(rmpt04, proc_data)
10. ├─chevron::run(rmpt04, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adex, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-rmpt04.R:33:3'): rmpt04 can handle some NA values ──────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(rmpt04, proc_data)) at test-rmpt04.R:33:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(rmpt04, proc_data)
10. ├─chevron::run(rmpt04, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adex, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-rmpt05.R:5:3'): rmpt05 function with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::rmpt05_main(pre_data) at test-rmpt05.R:5:3
2. └─rtables::build_table(lyt, adam_db$adex, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::pagdfrow(...)
11. │ └─base::data.frame(...)
12. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
13. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
14. └─rtables (local) .local(x, colwidths, max_width)
15. ├─base::unlist(...)
16. └─base::mapply(...)
17. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
18. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
19. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
20. ├─base::unlist(...)
21. └─base::vapply(...)
22. ├─formatters (local) FUN(X[[i]], ...)
23. └─formatters (local) FUN(X[[i]], ...)
24. └─base::vapply(...)
25. └─formatters (local) FUN(X[[i]], ...)
26. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
27. └─formatters::open_font_dev(fontspec)
── Error ('test-rmpt05.R:16:3'): rmpt05 can handle NA values ───────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(rmpt05, proc_data)) at test-rmpt05.R:16:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(rmpt05, proc_data)
10. ├─chevron::run(rmpt05, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adex, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-rmpt05.R:33:3'): rmpt05 can handle some NA values ──────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(rmpt05, proc_data)) at test-rmpt05.R:33:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(rmpt05, proc_data)
10. ├─chevron::run(rmpt05, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, adam_db$adex, alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-rmpt06.R:4:3'): rmpt06 works as expected ───────────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─rmpt06_pre(syn_data) %>% rmpt06_main() %>% rmpt01_post() at test-rmpt06.R:4:3
2. ├─chevron::rmpt01_post(.)
3. │ └─chevron:::std_postprocess(tlg)
4. │ └─chevron::report_null(tlg)
5. │ └─checkmate::assert_true(is.null(tlg) || rtables::is_rtable(tlg))
6. │ └─checkmate::checkTRUE(x, na.ok)
7. │ └─base::isTRUE(x)
8. └─chevron::rmpt06_main(.)
9. └─rtables::build_table(lyt$adsl, adam_db$adsl)
10. └─rtables::update_ref_indexing(tab)
11. ├─formatters::make_row_df(tt)
12. └─rtables::make_row_df(tt)
13. └─rtables (local) .local(...)
14. ├─formatters::make_row_df(...)
15. └─rtables::make_row_df(...)
16. └─rtables (local) .local(...)
17. ├─formatters::pagdfrow(...)
18. │ └─base::data.frame(...)
19. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
20. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
21. └─rtables (local) .local(x, colwidths, max_width)
22. ├─base::unlist(...)
23. └─base::mapply(...)
24. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
25. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
26. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
27. ├─base::unlist(...)
28. └─base::vapply(...)
29. ├─formatters (local) FUN(X[[i]], ...)
30. └─formatters (local) FUN(X[[i]], ...)
31. └─base::vapply(...)
32. └─formatters (local) FUN(X[[i]], ...)
33. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
34. └─formatters::open_font_dev(fontspec)
── Error ('test-rmpt06.R:12:3'): rmpt06 works as expected with show_diff = TRUE ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─... %>% rmpt01_post() at test-rmpt06.R:12:3
2. ├─chevron::rmpt01_post(.)
3. │ └─chevron:::std_postprocess(tlg)
4. │ └─chevron::report_null(tlg)
5. │ └─checkmate::assert_true(is.null(tlg) || rtables::is_rtable(tlg))
6. │ └─checkmate::checkTRUE(x, na.ok)
7. │ └─base::isTRUE(x)
8. └─chevron::rmpt06_main(., show_diff = TRUE)
9. └─rtables::build_table(lyt$adsl, adam_db$adsl)
10. └─rtables::update_ref_indexing(tab)
11. ├─formatters::make_row_df(tt)
12. └─rtables::make_row_df(tt)
13. └─rtables (local) .local(...)
14. ├─formatters::make_row_df(...)
15. └─rtables::make_row_df(...)
16. └─rtables (local) .local(...)
17. ├─formatters::make_row_df(...)
18. └─rtables::make_row_df(...)
19. └─rtables (local) .local(...)
20. ├─formatters::pagdfrow(...)
21. │ └─base::data.frame(...)
22. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
23. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
24. └─rtables (local) .local(x, colwidths, max_width)
25. ├─base::unlist(...)
26. └─base::mapply(...)
27. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
28. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
29. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
30. ├─base::unlist(...)
31. └─base::vapply(...)
32. ├─formatters (local) FUN(X[[i]], ...)
33. └─formatters (local) FUN(X[[i]], ...)
34. └─base::vapply(...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
37. └─formatters::open_font_dev(fontspec)
── Error ('test-rmpt06.R:28:3'): rmpt06 can handle all NA values ───────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(rmpt06, proc_data)) at test-rmpt06.R:28:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(rmpt06, proc_data)
10. ├─chevron::run(rmpt06, proc_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt$adsl, adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-rspt01.R:4:3'): rspt01 works as expected ───────────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-rspt01.R:4:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. └─chevron::rspt01_main(pre_data, dataset = "adrs", methods = list(diff_pval_method = "fisher"))
10. └─rtables::build_table(lyt, adam_db[[dataset]], alt_counts_df = adam_db$adsl)
11. └─rtables::update_ref_indexing(tab)
12. ├─formatters::make_row_df(tt)
13. └─rtables::make_row_df(tt)
14. └─rtables (local) .local(...)
15. ├─formatters::make_row_df(...)
16. └─rtables::make_row_df(...)
17. └─rtables (local) .local(...)
18. ├─formatters::make_row_df(...)
19. └─rtables::make_row_df(...)
20. └─rtables (local) .local(...)
21. ├─formatters::make_row_df(...)
22. └─rtables::make_row_df(...)
23. └─rtables (local) .local(...)
24. ├─formatters::pagdfrow(...)
25. │ └─base::data.frame(...)
26. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
27. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables (local) .local(x, colwidths, max_width)
29. ├─base::unlist(...)
30. └─base::mapply(...)
31. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
32. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
33. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. ├─base::unlist(...)
35. └─base::vapply(...)
36. ├─formatters (local) FUN(X[[i]], ...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─base::vapply(...)
39. └─formatters (local) FUN(X[[i]], ...)
40. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
41. └─formatters::open_font_dev(fontspec)
── Error ('test-rspt01.R:10:3'): rspt01 works as expected for stratified and unstratified analysis ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-rspt01.R:10:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(...)
10. ├─chevron::run(...)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(...)
14. └─rtables::build_table(lyt, adam_db[[dataset]], alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::pagdfrow(...)
29. │ └─base::data.frame(...)
30. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
31. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
32. └─rtables (local) .local(x, colwidths, max_width)
33. ├─base::unlist(...)
34. └─base::mapply(...)
35. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
36. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
37. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
38. ├─base::unlist(...)
39. └─base::vapply(...)
40. ├─formatters (local) FUN(X[[i]], ...)
41. └─formatters (local) FUN(X[[i]], ...)
42. └─base::vapply(...)
43. └─formatters (local) FUN(X[[i]], ...)
44. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
45. └─formatters::open_font_dev(fontspec)
── Error ('test-rspt01.R:30:3'): rspt01 works as expected for unstratified analysis only ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-rspt01.R:30:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(...)
10. ├─chevron::run(...)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(...)
14. └─rtables::build_table(lyt, adam_db[[dataset]], alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::pagdfrow(...)
29. │ └─base::data.frame(...)
30. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
31. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
32. └─rtables (local) .local(x, colwidths, max_width)
33. ├─base::unlist(...)
34. └─base::mapply(...)
35. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
36. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
37. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
38. ├─base::unlist(...)
39. └─base::vapply(...)
40. ├─formatters (local) FUN(X[[i]], ...)
41. └─formatters (local) FUN(X[[i]], ...)
42. └─base::vapply(...)
43. └─formatters (local) FUN(X[[i]], ...)
44. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
45. └─formatters::open_font_dev(fontspec)
── Error ('test-rspt01.R:48:3'): rspt01 works as expected for stratified analysis only ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-rspt01.R:48:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(...)
10. ├─chevron::run(...)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(...)
14. └─rtables::build_table(lyt, adam_db[[dataset]], alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::pagdfrow(...)
29. │ └─base::data.frame(...)
30. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
31. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
32. └─rtables (local) .local(x, colwidths, max_width)
33. ├─base::unlist(...)
34. └─base::mapply(...)
35. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
36. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
37. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
38. ├─base::unlist(...)
39. └─base::vapply(...)
40. ├─formatters (local) FUN(X[[i]], ...)
41. └─formatters (local) FUN(X[[i]], ...)
42. └─base::vapply(...)
43. └─formatters (local) FUN(X[[i]], ...)
44. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
45. └─formatters::open_font_dev(fontspec)
── Error ('test-rspt01.R:68:3'): rspt01 works if change reference group ────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-rspt01.R:68:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(...)
10. ├─chevron::run(...)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(...)
14. └─rtables::build_table(lyt, adam_db[[dataset]], alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::pagdfrow(...)
29. │ └─base::data.frame(...)
30. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
31. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
32. └─rtables (local) .local(x, colwidths, max_width)
33. ├─base::unlist(...)
34. └─base::mapply(...)
35. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
36. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
37. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
38. ├─base::unlist(...)
39. └─base::vapply(...)
40. ├─formatters (local) FUN(X[[i]], ...)
41. └─formatters (local) FUN(X[[i]], ...)
42. └─base::vapply(...)
43. └─formatters (local) FUN(X[[i]], ...)
44. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
45. └─formatters::open_font_dev(fontspec)
── Error ('test-rspt01.R:88:3'): rspt01 works if change statistic methods ──────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-rspt01.R:88:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(...)
10. ├─chevron::run(...)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(...)
14. └─rtables::build_table(lyt, adam_db[[dataset]], alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::pagdfrow(...)
29. │ └─base::data.frame(...)
30. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
31. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
32. └─rtables (local) .local(x, colwidths, max_width)
33. ├─base::unlist(...)
34. └─base::mapply(...)
35. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
36. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
37. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
38. ├─base::unlist(...)
39. └─base::vapply(...)
40. ├─formatters (local) FUN(X[[i]], ...)
41. └─formatters (local) FUN(X[[i]], ...)
42. └─base::vapply(...)
43. └─formatters (local) FUN(X[[i]], ...)
44. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
45. └─formatters::open_font_dev(fontspec)
── Error ('test-rspt01.R:117:3'): rspt01 works if change confidence interval ───
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-rspt01.R:117:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(...)
10. ├─chevron::run(...)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(...)
14. └─rtables::build_table(lyt, adam_db[[dataset]], alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::pagdfrow(...)
29. │ └─base::data.frame(...)
30. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
31. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
32. └─rtables (local) .local(x, colwidths, max_width)
33. ├─base::unlist(...)
34. └─base::mapply(...)
35. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
36. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
37. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
38. ├─base::unlist(...)
39. └─base::vapply(...)
40. ├─formatters (local) FUN(X[[i]], ...)
41. └─formatters (local) FUN(X[[i]], ...)
42. └─base::vapply(...)
43. └─formatters (local) FUN(X[[i]], ...)
44. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
45. └─formatters::open_font_dev(fontspec)
── Error ('test-ttet01.R:4:3'): ttet01 works as expected ───────────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-ttet01.R:4:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. └─chevron::ttet01_main(...)
10. └─rtables::build_table(lyt, anl)
11. └─rtables::update_ref_indexing(tab)
12. ├─formatters::make_row_df(tt)
13. └─rtables::make_row_df(tt)
14. └─rtables (local) .local(...)
15. ├─formatters::make_row_df(...)
16. └─rtables::make_row_df(...)
17. └─rtables (local) .local(...)
18. ├─formatters::make_row_df(...)
19. └─rtables::make_row_df(...)
20. └─rtables (local) .local(...)
21. ├─formatters::pagdfrow(...)
22. │ └─base::data.frame(...)
23. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
24. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables (local) .local(x, colwidths, max_width)
26. ├─base::unlist(...)
27. └─base::mapply(...)
28. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
29. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
30. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. ├─base::unlist(...)
32. └─base::vapply(...)
33. ├─formatters (local) FUN(X[[i]], ...)
34. └─formatters (local) FUN(X[[i]], ...)
35. └─base::vapply(...)
36. └─formatters (local) FUN(X[[i]], ...)
37. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
38. └─formatters::open_font_dev(fontspec)
── Error ('test-ttet01.R:15:3'): ttet01 works as expected for stratified and unstratified analysis ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-ttet01.R:15:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(...)
10. ├─chevron::run(...)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(...)
14. └─rtables::build_table(lyt, anl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-ttet01.R:36:3'): ttet01 works as expected for stratified analysis only ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-ttet01.R:36:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(...)
10. ├─chevron::run(...)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(...)
14. └─rtables::build_table(lyt, anl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-ttet01.R:58:3'): ttet01 works if change reference group ────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-ttet01.R:58:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(...)
10. ├─chevron::run(...)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(...)
14. └─rtables::build_table(lyt, anl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::pagdfrow(...)
26. │ └─base::data.frame(...)
27. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
28. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
29. └─rtables (local) .local(x, colwidths, max_width)
30. ├─base::unlist(...)
31. └─base::mapply(...)
32. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
33. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
34. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
35. ├─base::unlist(...)
36. └─base::vapply(...)
37. ├─formatters (local) FUN(X[[i]], ...)
38. └─formatters (local) FUN(X[[i]], ...)
39. └─base::vapply(...)
40. └─formatters (local) FUN(X[[i]], ...)
41. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
42. └─formatters::open_font_dev(fontspec)
── Error ('test-vst01.R:5:3'): vst01 functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::vst01_main(pre_data) at test-vst01.R:5:3
2. └─rtables::build_table(lyt, df = adam_db[[dataset]], alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::make_row_df(...)
17. └─rtables::make_row_df(...)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::pagdfrow(...)
23. │ └─base::data.frame(...)
24. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
25. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
26. └─rtables (local) .local(x, colwidths, max_width)
27. ├─base::unlist(...)
28. └─base::mapply(...)
29. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
30. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
31. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
32. ├─base::unlist(...)
33. └─base::vapply(...)
34. ├─formatters (local) FUN(X[[i]], ...)
35. └─formatters (local) FUN(X[[i]], ...)
36. └─base::vapply(...)
37. └─formatters (local) FUN(X[[i]], ...)
38. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
39. └─formatters::open_font_dev(fontspec)
── Error ('test-vst01.R:13:3'): run vst01 works as expected ────────────────────
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. ├─testthat::expect_silent(run(vst01, syn_data)) at test-vst01.R:13:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─chevron::run(vst01, syn_data)
10. ├─chevron::run(vst01, syn_data)
11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
12. │ └─base::do.call(what, new_args, envir = args_env)
13. └─chevron (local) `<fn>`(adam_db = adam_db)
14. └─rtables::build_table(lyt, df = adam_db[[dataset]], alt_counts_df = adam_db$adsl)
15. └─rtables::update_ref_indexing(tab)
16. ├─formatters::make_row_df(tt)
17. └─rtables::make_row_df(tt)
18. └─rtables (local) .local(...)
19. ├─formatters::make_row_df(...)
20. └─rtables::make_row_df(...)
21. └─rtables (local) .local(...)
22. ├─formatters::make_row_df(...)
23. └─rtables::make_row_df(...)
24. └─rtables (local) .local(...)
25. ├─formatters::make_row_df(...)
26. └─rtables::make_row_df(...)
27. └─rtables (local) .local(...)
28. ├─formatters::make_row_df(...)
29. └─rtables::make_row_df(...)
30. └─rtables (local) .local(...)
31. ├─formatters::make_row_df(...)
32. └─rtables::make_row_df(...)
33. └─rtables (local) .local(...)
34. ├─formatters::pagdfrow(...)
35. │ └─base::data.frame(...)
36. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
37. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
38. └─rtables (local) .local(x, colwidths, max_width)
39. ├─base::unlist(...)
40. └─base::mapply(...)
41. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
42. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
43. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
44. ├─base::unlist(...)
45. └─base::vapply(...)
46. ├─formatters (local) FUN(X[[i]], ...)
47. └─formatters (local) FUN(X[[i]], ...)
48. └─base::vapply(...)
49. └─formatters (local) FUN(X[[i]], ...)
50. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
51. └─formatters::open_font_dev(fontspec)
── Error ('test-vst02.R:5:3'): vst02 functions with default argument value return expected result with test data ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::vst02_1_main(pre_data) at test-vst02.R:5:3
2. └─rtables::build_table(lyt, adam_db$advs, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::pagdfrow(...)
17. │ └─base::data.frame(...)
18. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
19. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
20. └─rtables (local) .local(x, colwidths, max_width)
21. ├─base::unlist(...)
22. └─base::mapply(...)
23. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
24. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
25. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
26. ├─base::unlist(...)
27. └─base::vapply(...)
28. ├─formatters (local) FUN(X[[i]], ...)
29. └─formatters (local) FUN(X[[i]], ...)
30. └─base::vapply(...)
31. └─formatters (local) FUN(X[[i]], ...)
32. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
33. └─formatters::open_font_dev(fontspec)
── Error ('test-vst02.R:12:3'): vst02 functions return expected result with test data when excluding subject with baseline abnormality ──
Error in `nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)`: argument "fontspec" is missing, with no default
Backtrace:
▆
1. └─chevron::vst02_2_main(pre_data) at test-vst02.R:12:3
2. └─rtables::build_table(lyt, adam_db$advs, alt_counts_df = adam_db$adsl)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::make_row_df(...)
11. └─rtables::make_row_df(...)
12. └─rtables (local) .local(...)
13. ├─formatters::make_row_df(...)
14. └─rtables::make_row_df(...)
15. └─rtables (local) .local(...)
16. ├─formatters::pagdfrow(...)
17. │ └─base::data.frame(...)
18. ├─formatters::nlines(tt, colwidths = colwidths, max_width = max_width)
19. └─rtables::nlines(tt, colwidths = colwidths, max_width = max_width)
20. └─rtables (local) .local(x, colwidths, max_width)
21. ├─base::unlist(...)
22. └─base::mapply(...)
23. └─rtables (local) `<fn>`(s = dots[[1L]][[1L]], w = dots[[2L]][[1L]])
24. ├─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
25. └─formatters::nlines(strsplit(s, "\n", fixed = TRUE), max_width = w)
26. ├─base::unlist(...)
27. └─base::vapply(...)
28. ├─formatters (local) FUN(X[[i]], ...)
29. └─formatters (local) FUN(X[[i]], ...)
30. └─base::vapply(...)
31. └─formatters (local) FUN(X[[i]], ...)
32. └─formatters::wrap_txt(xi, max_width, fontspec = fontspec)
33. └─formatters::open_font_dev(fontspec)
[ FAIL 171 | WARN 0 | SKIP 11 | PASS 169 ]
Deleting unused snapshots:
• mng01/run-mng01-with-custom-unnamed-color-set.svg
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.2.6
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘chevron.Rmd’ using rmarkdown
Quitting from lines 85-86 [unnamed-chunk-3] (chevron.Rmd)
Error: processing vignette 'chevron.Rmd' failed with diagnostics:
argument "fontspec" is missing, with no default
--- failed re-building ‘chevron.Rmd’
--- re-building ‘chevron_catalog.rmd’ using rmarkdown
Quitting from lines 65-67 [unnamed-chunk-5] (chevron_catalog.rmd)
Error: processing vignette 'chevron_catalog.rmd' failed with diagnostics:
argument "fontspec" is missing, with no default
--- failed re-building ‘chevron_catalog.rmd’
--- re-building ‘script_generator.Rmd’ using rmarkdown
--- finished re-building ‘script_generator.Rmd’
SUMMARY: processing the following files failed:
‘chevron.Rmd’ ‘chevron_catalog.rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc