Last updated on 2026-08-21 14:50:15 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-fedora-clang | 0.1.2 | 16.00 | 147.39 | 163.39 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 0.1.2 | 16.00 | 150.96 | 166.96 | OK | |
| r-release-macos-arm64 | 0.1.2 | 6.00 | 54.00 | 60.00 | OK | |
| r-release-macos-x86_64 | 0.1.2 | 17.00 | 211.00 | 228.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.2 | 5.00 | 57.00 | 62.00 | ERROR | |
| r-oldrel-macos-x86_64 | 0.1.2 | 16.00 | 215.00 | 231.00 | OK |
Version: 0.1.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [7s/7s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(ivdtools)
Attaching package: 'ivdtools'
The following object is masked from 'package:testthat':
describe
The following object is masked from 'package:stats':
profile
The following object is masked from 'package:base':
kappa
>
> test_check("ivdtools")
Correlation
Method: pearson
r = 0.9999, 95% CI [0.9995, 1.0000]
p-value: < 2.2e-16
n = 12
Regression
Method: OLS
Intercept = -0.1079 (SE = 0.1590)
Slope = 1.0036 (SE = 0.0052)
Intercept 95% CI: [-0.4622, 0.2463]
Slope 95% CI: [0.9920, 1.0152]
H0: slope = 1 -> t = 0.6864, p = 0.5081
slope not significantly different from 1 (CI contains 1)
R-squared = 0.9997
Sigma = 0.2248
n = 12
Bland-Altman
Type: difference
Y-axis: candidate - reference
X-axis: Mean of candidate and reference
n = 12
Mean diff: 0.0083
SD diff: 0.2193
95% LoA: [-0.4215, 0.4382]
95% CI for LoA:
Lower LoA: [-0.6667, -0.1764]
Upper LoA: [0.1930, 0.6834]
AUC Table
Column AUC 95% CI Direction
------------------------------------------------------------
marker 1.0000 [ NA, NA] geq
Saving _problems/test-sensitivity-27.R
Saving _problems/test-sensitivity-32.R
Saving _problems/test-sensitivity-34.R
Saving _problems/test-sensitivity-110.R
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 330 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-sensitivity.R:27:3'): full pipeline: LoB / LoD / LoQ match EP17-A2 and analytic values ──
Expected `as.numeric(object)` to equal `as.numeric(expected)`.
Differences:
`actual`: 0.219
`expected`: 0.198
Backtrace:
▆
1. └─ivdtools:::expect_num_equal(res$lod, lod_ana, tolerance = 1e-06) at test-sensitivity.R:27:3
2. └─testthat::expect_equal(...) at ./helper-testing.R:8:3
── Failure ('test-sensitivity.R:32:3'): full pipeline: LoB / LoD / LoQ match EP17-A2 and analytic values ──
Expected `as.numeric(object)` to equal `as.numeric(expected)`.
Differences:
`actual`: 0.5086
`expected`: 0.5000
Backtrace:
▆
1. └─ivdtools:::expect_num_equal(res$loq, 0.5, tolerance = 0.001) at test-sensitivity.R:32:3
2. └─testthat::expect_equal(...) at ./helper-testing.R:8:3
── Failure ('test-sensitivity.R:34:3'): full pipeline: LoB / LoD / LoQ match EP17-A2 and analytic values ──
Expected `res$model` to equal "Model_4".
Differences:
`actual`: "Model_7"
`expected`: "Model_4"
── Failure ('test-sensitivity.R:110:3'): no-blank data returns only LoQ ────────
Expected `as.numeric(object)` to equal `as.numeric(expected)`.
Differences:
`actual`: 0.5086
`expected`: 0.5000
Backtrace:
▆
1. └─ivdtools:::expect_num_equal(res$loq, 0.5, tolerance = 0.001) at test-sensitivity.R:110:3
2. └─testthat::expect_equal(...) at ./helper-testing.R:8:3
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 330 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-arm64