Last updated on 2025-07-10 06:50:23 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.67 | 236.91 | 250.58 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.05 | 219.75 | 229.80 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 335.93 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 383.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.3 | 19.00 | 159.00 | 178.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.57 | 296.00 | 310.57 | OK | |
| r-release-linux-x86_64 | 1.1.3 | 14.35 | 218.61 | 232.96 | OK | |
| r-release-macos-arm64 | 1.0.5 | 41.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 172.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.5 | 36.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 154.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 236.00 | 260.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/123s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.535, system: 0.048, elapsed: 2.155 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.933, system: 0.100, elapsed: 10.469 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.013, elapsed: 0.222 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.762, system: 0.194, elapsed: 5.539 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.005, elapsed: 0.252 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.144, system: 0.380, elapsed: 19.386 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.545, system: 0.042, elapsed: 2.242 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.079, system: 0.104, elapsed: 12.406 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.013, elapsed: 0.290 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.793, system: 0.173, elapsed: 6.315 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.306 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.308, system: 0.356, elapsed: 22.454 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.555, system: 0.030, elapsed: 2.516 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.979, system: 0.083, elapsed: 19.788 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.013, elapsed: 0.509 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.779, system: 0.184, elapsed: 10.532 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.414 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.161, system: 0.211, elapsed: 1.696 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.443, system: 0.548, elapsed: 36.801 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.469, system: 0.029, elapsed: 3.309 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.992, system: 0.066, elapsed: 13.646 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.012, elapsed: 0.325 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.707, system: 0.170, elapsed: 5.584 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.202 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.263, system: 0.452, elapsed: 14.378 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.446, system: 0.764, elapsed: 38.563 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [77s/104s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.445, system: 0.038, elapsed: 1.538 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.732, system: 0.065, elapsed: 9.502 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.173, system: 0.011, elapsed: 0.184 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.324, system: 0.170, elapsed: 3.918 seconds]
Computing values for grid cells...
... done. [user: 0.156, system: 0.003, elapsed: 0.247 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.341, system: 0.304, elapsed: 15.971 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.559, system: 0.036, elapsed: 2.585 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.042, system: 0.071, elapsed: 15.240 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.332 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.597, system: 0.174, elapsed: 6.900 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.004, elapsed: 0.291 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.090, system: 0.316, elapsed: 26.275 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.557, system: 0.037, elapsed: 2.517 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.901, system: 0.059, elapsed: 13.373 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.011, elapsed: 0.274 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.404, system: 0.157, elapsed: 4.941 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.002, elapsed: 0.235 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.066, system: 0.248, elapsed: 0.981 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.888, system: 0.537, elapsed: 23.288 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.447, system: 0.029, elapsed: 2.076 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.807, system: 0.049, elapsed: 12.166 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.179, system: 0.010, elapsed: 0.229 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.419, system: 0.154, elapsed: 4.133 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.004, elapsed: 0.215 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.040, system: 0.580, elapsed: 12.734 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.706, system: 0.855, elapsed: 32.437 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64