Last updated on 2025-08-23 12:48:34 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.34 | 254.04 | 267.38 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.34 | 203.28 | 213.62 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 315.74 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 476.97 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 19.00 | 190.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.94 | 308.60 | 323.54 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 12.83 | 270.65 | 283.48 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 114.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 201.00 | 222.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 166.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 236.00 | 260.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [72s/84s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.497, system: 0.052, elapsed: 2.478 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.052, system: 0.160, elapsed: 15.712 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.016, elapsed: 0.324 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.666, system: 0.207, elapsed: 5.514 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.008, elapsed: 0.237 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.098, system: 0.472, elapsed: 25.153 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.488, system: 0.053, elapsed: 2.472 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.263, system: 0.052, elapsed: 8.720 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.175, system: 0.009, elapsed: 0.185 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.429, system: 0.144, elapsed: 3.724 seconds]
Computing values for grid cells...
... done. [user: 0.149, system: 0.002, elapsed: 0.153 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 13.985, system: 0.277, elapsed: 15.788 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.417, system: 0.024, elapsed: 1.468 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 7.972, system: 0.039, elapsed: 8.113 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.166, system: 0.009, elapsed: 0.178 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.231, system: 0.150, elapsed: 3.431 seconds]
Computing values for grid cells...
... done. [user: 0.142, system: 0.002, elapsed: 0.147 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.082, system: 0.198, elapsed: 0.803 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.569, system: 0.440, elapsed: 14.719 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.337, system: 0.024, elapsed: 1.363 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 7.909, system: 0.036, elapsed: 7.990 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.170, system: 0.010, elapsed: 0.181 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.157, system: 0.150, elapsed: 3.315 seconds]
Computing values for grid cells...
... done. [user: 0.140, system: 0.002, elapsed: 0.143 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 8.788, system: 0.349, elapsed: 9.150 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 22.069, system: 0.600, elapsed: 22.741 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/107s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.524, system: 0.038, elapsed: 2.190 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.883, system: 0.059, elapsed: 13.634 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.012, elapsed: 0.294 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.665, system: 0.182, elapsed: 5.587 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.004, elapsed: 0.242 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.983, system: 0.314, elapsed: 22.768 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.528, system: 0.035, elapsed: 2.203 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.970, system: 0.059, elapsed: 10.180 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.015, elapsed: 0.329 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.734, system: 0.178, elapsed: 5.782 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.004, elapsed: 0.266 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.147, system: 0.316, elapsed: 19.621 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.589, system: 0.034, elapsed: 2.393 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.119, system: 0.084, elapsed: 13.757 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.011, elapsed: 0.300 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.548, system: 0.162, elapsed: 4.872 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.013, elapsed: 0.232 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.053, system: 0.231, elapsed: 0.913 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.320, system: 0.566, elapsed: 23.432 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.421, system: 0.025, elapsed: 1.472 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.978, system: 0.047, elapsed: 11.278 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.011, elapsed: 0.275 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.555, system: 0.160, elapsed: 5.145 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.005, elapsed: 0.239 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.094, system: 0.449, elapsed: 14.857 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.048, system: 0.721, elapsed: 34.081 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64