Last updated on 2026-04-14 06:50:25 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.70 | 272.80 | 287.50 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.93 | 225.63 | 237.56 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 23.00 | 300.78 | 323.78 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 31.00 | 345.52 | 376.52 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 4.00 | 46.00 | 50.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 198.00 | 220.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 17.39 | 342.95 | 360.34 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 12.92 | 348.12 | 361.04 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 511.00 | 522.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 18.00 | 0.00 | 18.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 705.00 | 716.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 243.00 | 266.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [105s/458s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.564, system: 0.051, elapsed: 2.321 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.562, system: 0.124, elapsed: 15.163 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.271, system: 0.023, elapsed: 0.621 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.468, system: 0.893, elapsed: 22.104 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.007, elapsed: 0.351 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.634, system: 1.128, elapsed: 41.449 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.713, system: 0.071, elapsed: 2.968 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.581, system: 0.146, elapsed: 17.054 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.019, elapsed: 1.054 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.447, system: 1.054, elapsed: 109.947 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.009, elapsed: 0.388 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.742, system: 1.398, elapsed: 132.617 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.808, system: 0.094, elapsed: 3.876 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.986, system: 0.245, elapsed: 18.594 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.322, system: 0.021, elapsed: 1.315 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.518, system: 0.951, elapsed: 112.782 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.011, elapsed: 0.311 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.367, system: 0.356, elapsed: 1.701 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.887, system: 1.726, elapsed: 139.744 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.766, system: 0.086, elapsed: 3.006 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.879, system: 0.198, elapsed: 16.734 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.215, system: 0.017, elapsed: 1.080 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.046, system: 0.867, elapsed: 72.782 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.007, elapsed: 0.193 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.400, system: 0.705, elapsed: 41.027 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 31.239, system: 1.950, elapsed: 136.042 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [2m/11m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.602, system: 0.048, elapsed: 3.062 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.555, system: 0.083, elapsed: 16.853 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.020, elapsed: 1.137 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.659, system: 0.835, elapsed: 102.003 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.010, elapsed: 0.418 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.793, system: 1.049, elapsed: 124.533 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.769, system: 0.076, elapsed: 4.477 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.017, system: 0.270, elapsed: 21.952 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.227, system: 0.024, elapsed: 1.185 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.023, system: 1.126, elapsed: 161.372 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.014, elapsed: 0.425 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.806, system: 1.546, elapsed: 190.627 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.568, system: 0.038, elapsed: 3.054 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.530, system: 0.078, elapsed: 17.301 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.215, system: 0.017, elapsed: 1.040 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.746, system: 0.902, elapsed: 148.425 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.005, elapsed: 0.284 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.223, system: 0.247, elapsed: 1.264 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.143, system: 1.332, elapsed: 172.424 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.551, system: 0.033, elapsed: 2.253 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.518, system: 0.067, elapsed: 13.476 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.017, elapsed: 1.169 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.672, system: 0.813, elapsed: 97.512 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.005, elapsed: 0.268 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.442, system: 0.670, elapsed: 38.162 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.277, system: 1.642, elapsed: 153.866 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64