Last updated on 2025-11-24 11:50:11 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.68 | 238.22 | 250.90 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.16 | 250.28 | 260.44 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 70.00 | 267.40 | 337.40 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 82.00 | 336.78 | 418.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 25.00 | 189.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.55 | 253.78 | 269.33 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.21 | 251.43 | 266.64 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 26.00 | 379.00 | 405.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 21.00 | 268.00 | 289.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 226.00 | 249.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [99s/278s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.810, system: 0.112, elapsed: 6.832 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.360, system: 0.477, elapsed: 46.901 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.210, system: 0.033, elapsed: 0.611 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.716, system: 0.541, elapsed: 13.028 seconds]
Computing values for grid cells...
... done. [user: 0.207, system: 0.024, elapsed: 0.673 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.055, system: 1.578, elapsed: 72.128 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 2.144, system: 0.201, elapsed: 4.637 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.504, system: 0.579, elapsed: 25.912 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.040, elapsed: 0.662 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.637, system: 0.421, elapsed: 15.656 seconds]
Computing values for grid cells...
... done. [user: 0.194, system: 0.012, elapsed: 0.247 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.430, system: 1.623, elapsed: 49.836 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.717, system: 0.071, elapsed: 2.211 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.388, system: 0.432, elapsed: 31.072 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.216, system: 0.035, elapsed: 0.654 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.484, system: 0.442, elapsed: 11.908 seconds]
Computing values for grid cells...
... done. [user: 0.227, system: 0.035, elapsed: 0.852 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.433, system: 0.423, elapsed: 3.602 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.276, system: 1.794, elapsed: 52.575 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.765, system: 0.084, elapsed: 4.674 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.098, system: 0.280, elapsed: 22.071 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.038, elapsed: 0.641 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.524, system: 0.423, elapsed: 12.026 seconds]
Computing values for grid cells...
... done. [user: 0.213, system: 0.021, elapsed: 0.795 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.069, system: 1.082, elapsed: 34.115 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 29.749, system: 2.287, elapsed: 77.889 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [90s/187s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.875, system: 0.098, elapsed: 5.447 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.096, system: 0.291, elapsed: 24.529 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.017, elapsed: 0.445 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.959, system: 0.262, elapsed: 8.499 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.009, elapsed: 0.305 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.913, system: 0.723, elapsed: 40.643 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.722, system: 0.074, elapsed: 4.310 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.048, system: 0.254, elapsed: 23.378 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.019, elapsed: 0.435 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.011, system: 0.248, elapsed: 6.589 seconds]
Computing values for grid cells...
... done. [user: 0.197, system: 0.009, elapsed: 0.586 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.771, system: 0.650, elapsed: 36.426 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.726, system: 0.061, elapsed: 3.073 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.022, system: 0.219, elapsed: 19.469 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.207, system: 0.024, elapsed: 0.431 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.093, system: 0.299, elapsed: 8.800 seconds]
Computing values for grid cells...
... done. [user: 0.196, system: 0.012, elapsed: 0.383 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.192, system: 0.294, elapsed: 1.803 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.146, system: 0.989, elapsed: 35.445 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.729, system: 0.055, elapsed: 3.419 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.012, system: 0.219, elapsed: 19.020 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.208, system: 0.021, elapsed: 0.671 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.117, system: 0.310, elapsed: 9.150 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.009, elapsed: 0.350 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.354, system: 0.754, elapsed: 25.057 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.307, system: 1.415, elapsed: 59.291 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64