CRAN Package Check Results for Package mlr3pipelines

Last updated on 2026-04-17 06:54:37 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.11.0 39.30 736.47 775.77 OK
r-devel-linux-x86_64-debian-gcc 0.11.0 25.53 480.01 505.54 OK
r-devel-linux-x86_64-fedora-clang 0.11.0 62.00 1135.34 1197.34 OK
r-devel-linux-x86_64-fedora-gcc 0.11.0 68.00 1239.29 1307.29 OK
r-devel-macos-arm64 0.11.0 8.00 110.00 118.00 OK
r-devel-windows-x86_64 0.11.0 38.00 559.00 597.00 OK
r-patched-linux-x86_64 0.11.0 50.73 688.75 739.48 OK
r-release-linux-x86_64 0.11.0 32.94 637.45 670.39 OK
r-release-macos-arm64 0.11.0 8.00 113.00 121.00 OK
r-release-macos-x86_64 0.11.0 28.00 883.00 911.00 OK
r-release-windows-x86_64 0.11.0 38.00 512.00 550.00 OK
r-oldrel-macos-arm64 0.11.0 8.00 107.00 115.00 ERROR
r-oldrel-macos-x86_64 0.11.0 25.00 578.00 603.00 ERROR
r-oldrel-windows-x86_64 0.11.0 55.00 526.00 581.00 ERROR

Check Details

Version: 0.11.0
Check: examples
Result: ERROR Running examples in ‘mlr3pipelines-Ex.R’ failed The error most likely occurred in: > ### Name: mlr_pipeops_nmf > ### Title: Non-negative Matrix Factorization > ### Aliases: mlr_pipeops_nmf PipeOpNMF > > ### ** Examples > > ## Don't show: > if (mlr3misc::require_namespaces(c("NMF", "MASS"), quietly = TRUE)) withAutoprint({ # examplesIf + ## End(Don't show) + ## Don't show: + # NMF attaches these packages to search path on load, #929 + lapply(c("package:Biobase", "package:BiocGenerics", "package:generics"), detach, character.only = TRUE) + ## End(Don't show) + library("mlr3") + + task = tsk("iris") + pop = po("nmf") + + task$data() + pop$train(list(task))[[1]]$data() + + pop$state + ## Don't show: + # BiocGenerics overwrites printer for our tables mlr-org/mlr3#1112 + # Necessary as detaching packages does not remove registered S3 methods + suppressWarnings(try(rm("format.list", envir = .BaseNamespaceEnv$.__S3MethodsTable__.), silent = TRUE)) + ## End(Don't show) + ## Don't show: + }) # examplesIf > lapply(c("package:Biobase", "package:BiocGenerics", "package:generics"), + detach, character.only = TRUE) Error in FUN(X[[i]], ...) : invalid 'name' argument Calls: withAutoprint ... withVisible -> eval -> eval -> lapply -> lapply -> FUN Execution halted Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 0.11.0
Check: tests
Result: ERROR Running ‘testthat.R’ [89s/44s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > if (requireNamespace("testthat", quietly = TRUE)) { + library("checkmate") + library("testthat") + library("mlr3") + library("paradox") + library("mlr3pipelines") + test_check("mlr3pipelines") + } Starting 2 test processes. > test_Graph.R: Training debug.multi with input list(input_1 = 1, input_2 = 1) > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_multiplicities.R: > test_multiplicities.R: > test_multiplicities.R: [[1]] > test_multiplicities.R: [1] 0 > test_multiplicities.R: > test_pipeop_blsmote.R: [1] "Borderline-SMOTE done" > test_pipeop_blsmote.R: [1] "Borderline-SMOTE done" > test_pipeop_blsmote.R: [1] "Borderline-SMOTE done" > test_pipeop_blsmote.R: [1] "Borderline-SMOTE done" Saving _problems/test_pipeop_datefeatures-7.R Saving _problems/test_pipeop_datefeatures-17.R > test_pipeop_isomap.R: 2026-03-23 08:14:28.445544: Isomap START > test_pipeop_isomap.R: 2026-03-23 08:14:28.445781: constructing knn graph > test_pipeop_isomap.R: 2026-03-23 08:14:28.448718: calculating geodesic distances > test_pipeop_isomap.R: 2026-03-23 08:14:28.454427: Classical Scaling > test_pipeop_isomap.R: 2026-03-23 08:14:28.466704: Isomap START > test_pipeop_isomap.R: 2026-03-23 08:14:28.466827: constructing knn graph > test_pipeop_isomap.R: 2026-03-23 08:14:28.469401: calculating geodesic distances > test_pipeop_isomap.R: 2026-03-23 08:14:28.475139: Classical Scaling > test_pipeop_isomap.R: 2026-03-23 08:14:28.481901: L-Isomap embed START > test_pipeop_isomap.R: 2026-03-23 08:14:28.48208: constructing knn graph > test_pipeop_isomap.R: 2026-03-23 08:14:28.486462: calculating geodesic distances > test_pipeop_isomap.R: 2026-03-23 08:14:28.501297: embedding > test_pipeop_isomap.R: 2026-03-23 08:14:28.501677: DONE > test_pipeop_isomap.R: 2026-03-23 08:14:28.508111: L-Isomap embed START > test_pipeop_isomap.R: 2026-03-23 08:14:28.508253: constructing knn graph > test_pipeop_isomap.R: 2026-03-23 08:14:28.554855: calculating geodesic distances > test_pipeop_isomap.R: 2026-03-23 08:14:28.569702: embedding > test_pipeop_isomap.R: 2026-03-23 08:14:28.570263: DONE > test_pipeop_isomap.R: 2026-03-23 08:14:28.599514: Isomap START > test_pipeop_isomap.R: 2026-03-23 08:14:28.599669: constructing knn graph > test_pipeop_isomap.R: 2026-03-23 08:14:28.604706: calculating geodesic distances > test_pipeop_isomap.R: 2026-03-23 08:14:28.638057: Classical Scaling > test_pipeop_isomap.R: 2026-03-23 08:14:28.648015: L-Isomap embed START > test_pipeop_isomap.R: 2026-03-23 08:14:28.648238: constructing knn graph > test_pipeop_isomap.R: 2026-03-23 08:14:28.656088: calculating geodesic distances > test_pipeop_isomap.R: 2026-03-23 08:14:28.732572: embedding > test_pipeop_isomap.R: 2026-03-23 08:14:28.733599: DONE > test_pipeop_isomap.R: 2026-03-23 08:14:28.782767: Isomap START > test_pipeop_isomap.R: 2026-03-23 08:14:28.782909: constructing knn graph > test_pipeop_isomap.R: 2026-03-23 08:14:28.785274: calculating geodesic distances > test_pipeop_isomap.R: 2026-03-23 08:14:28.791339: Classical Scaling > test_pipeop_isomap.R: 2026-03-23 08:14:28.798693: L-Isomap embed START > test_pipeop_isomap.R: 2026-03-23 08:14:28.798837: constructing knn graph > test_pipeop_isomap.R: 2026-03-23 08:14:28.803385: calculating geodesic distances > test_pipeop_isomap.R: 2026-03-23 08:14:28.818232: embedding > test_pipeop_isomap.R: 2026-03-23 08:14:28.818598: DONE > test_pipeop_isomap.R: 2026-03-23 08:14:28.853303: Isomap START > test_pipeop_isomap.R: 2026-03-23 08:14:28.853446: constructing knn graph > test_pipeop_isomap.R: 2026-03-23 08:14:28.855929: calculating geodesic distances > test_pipeop_isomap.R: 2026-03-23 08:14:28.862323: Classical Scaling > test_pipeop_isomap.R: 2026-03-23 08:14:28.87601: L-Isomap embed START > test_pipeop_isomap.R: 2026-03-23 08:14:28.876214: constructing knn graph > test_pipeop_isomap.R: 2026-03-23 08:14:28.881248: calculating geodesic distances > test_pipeop_isomap.R: 2026-03-23 08:14:28.895996: embedding > test_pipeop_isomap.R: 2026-03-23 08:14:28.896374: DONE > test_pipeop_isomap.R: 2026-03-23 08:14:28.928906: Isomap START > test_pipeop_isomap.R: 2026-03-23 08:14:28.929028: constructing knn graph > test_pipeop_isomap.R: 2026-03-23 08:14:28.931067: calculating geodesic distances > test_pipeop_isomap.R: 2026-03-23 08:14:28.936888: Classical Scaling > test_pipeop_isomap.R: 2026-03-23 08:14:28.947236: L-Isomap embed START > test_pipeop_isomap.R: 2026-03-23 08:14:28.947393: constructing knn graph > test_pipeop_isomap.R: 2026-03-23 08:14:28.951978: calculating geodesic distances > test_pipeop_isomap.R: 2026-03-23 08:14:28.966932: embedding > test_pipeop_isomap.R: 2026-03-23 08:14:28.967299: DONE > test_pipeop_isomap.R: 2026-03-23 08:14:28.985915: Isomap START > test_pipeop_isomap.R: 2026-03-23 08:14:28.986056: constructing knn graph > test_pipeop_isomap.R: 2026-03-23 08:14:28.988403: calculating geodesic distances > test_pipeop_isomap.R: 2026-03-23 08:14:28.994435: Classical Scaling > test_pipeop_isomap.R: 2026-03-23 08:14:29.007121: L-Isomap embed START > test_pipeop_isomap.R: 2026-03-23 08:14:29.007337: constructing knn graph > test_pipeop_isomap.R: 2026-03-23 08:14:29.011907: calculating geodesic distances > test_pipeop_isomap.R: 2026-03-23 08:14:29.026945: embedding > test_pipeop_isomap.R: 2026-03-23 08:14:29.027341: DONE > test_pipeop_isomap.R: 2026-03-23 08:14:29.057147: Isomap START > test_pipeop_isomap.R: 2026-03-23 08:14:29.057385: constructing knn graph > test_pipeop_isomap.R: 2026-03-23 08:14:29.059752: calculating geodesic distances > test_pipeop_isomap.R: 2026-03-23 08:14:29.065931: Classical Scaling > test_pipeop_isomap.R: 2026-03-23 08:14:29.081954: L-Isomap embed START > test_pipeop_isomap.R: 2026-03-23 08:14:29.082164: constructing knn graph > test_pipeop_isomap.R: 2026-03-23 08:14:29.087034: calculating geodesic distances > test_pipeop_isomap.R: 2026-03-23 08:14:29.101948: embedding > test_pipeop_isomap.R: 2026-03-23 08:14:29.102314: DONE > test_pipeop_isomap.R: 2026-03-23 08:14:29.123791: Isomap START > test_pipeop_isomap.R: 2026-03-23 08:14:29.12392: constructing knn graph > test_pipeop_isomap.R: 2026-03-23 08:14:29.126403: calculating geodesic distances > test_pipeop_isomap.R: 2026-03-23 08:14:29.132599: Classical Scaling > test_pipeop_isomap.R: 2026-03-23 08:14:29.152912: Isomap START > test_pipeop_isomap.R: 2026-03-23 08:14:29.153068: constructing knn graph > test_pipeop_isomap.R: 2026-03-23 08:14:29.155645: calculating geodesic distances > test_pipeop_isomap.R: 2026-03-23 08:14:29.161717: Classical Scaling > test_pipeop_isomap.R: 2026-03-23 08:14:29.167856: Isomap START > test_pipeop_isomap.R: 2026-03-23 08:14:29.167972: constructing knn graph > test_pipeop_isomap.R: 2026-03-23 08:14:29.170495: calculating geodesic distances > test_pipeop_isomap.R: 2026-03-23 08:14:29.176557: Classical Scaling Saving _problems/test_pipeop_nmf-45.R Saving _problems/test_pipeop_nmf-73.R Saving _problems/test_pipeop_nmf-93.R Saving _problems/test_pipeop_nmf-98.R > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols [ FAIL 6 | WARN 0 | SKIP 128 | PASS 8754 ] ══ Skipped tests (128) ═════════════════════════════════════════════════════════ • On CRAN (125): 'test_CnfFormula_simplify.R:6:3', 'test_CnfFormula.R:591:3', 'test_Graph.R:283:3', 'test_PipeOp.R:32:1', 'test_GraphLearner.R:5:3', 'test_GraphLearner.R:221:3', 'test_GraphLearner.R:343:3', 'test_GraphLearner.R:408:3', 'test_GraphLearner.R:571:3', 'test_doublearrow.R:2:1', 'test_gunion.R:2:1', 'test_learner_weightedaverage.R:5:3', 'test_learner_weightedaverage.R:57:3', 'test_learner_weightedaverage.R:105:3', 'test_learner_weightedaverage.R:152:3', 'test_meta.R:39:3', 'test_dictionary.R:7:3', 'test_mlr_graphs_branching.R:26:3', 'test_mlr_graphs_bagging.R:6:3', 'test_mlr_graphs_robustify.R:5:3', 'test_pipeop_adas.R:8:3', 'test_pipeop_blsmote.R:8:3', 'test_pipeop_branch.R:4:3', 'test_pipeop_chunk.R:4:3', 'test_pipeop_classbalancing.R:7:3', 'test_pipeop_boxcox.R:7:3', 'test_pipeop_classweights.R:10:3', 'test_pipeop_classweightsex.R:9:3', 'test_pipeop_colapply.R:9:3', 'test_pipeop_collapsefactors.R:6:3', 'test_pipeop_copy.R:5:3', 'test_pipeop_colroles.R:6:3', 'test_pipeop_decode.R:14:3', 'test_pipeop_encode.R:21:3', 'test_pipeop_encodeimpact.R:11:3', 'test_pipeop_encodepl.R:5:3', 'test_pipeop_encodepl.R:72:3', 'test_pipeop_ensemble.R:3:1', 'test_pipeop_encodelmer.R:15:3', 'test_pipeop_encodelmer.R:37:3', 'test_pipeop_encodelmer.R:80:3', 'test_pipeop_filter.R:7:3', 'test_pipeop_fixfactors.R:9:3', 'test_pipeop_histbin.R:7:3', 'test_pipeop_featureunion.R:9:3', 'test_pipeop_featureunion.R:134:3', 'test_pipeop_ica.R:7:3', 'test_pipeop_impute.R:4:3', 'test_pipeop_info.R:3:1', 'test_pipeop_imputelearner.R:43:3', 'test_pipeop_kernelpca.R:9:3', 'test_pipeop_isomap.R:10:3', 'test_pipeop_learner.R:17:3', 'test_pipeop_learnerpicvplus.R:2:1', 'test_pipeop_missind.R:6:3', 'test_pipeop_modelmatrix.R:7:3', 'test_pipeop_multiplicityexply.R:9:3', 'test_pipeop_multiplicityimply.R:9:3', 'test_pipeop_mutate.R:9:3', 'test_pipeop_nearmiss.R:7:3', 'test_pipeop_learnercv.R:3:3', 'test_pipeop_learnercv.R:43:3', 'test_pipeop_learnercv.R:73:3', 'test_pipeop_learnercv.R:92:3', 'test_pipeop_learnercv.R:141:3', 'test_pipeop_learnercv.R:157:3', 'test_pipeop_learnercv.R:203:3', 'test_pipeop_learnercv.R:249:3', 'test_pipeop_learnercv.R:278:3', 'test_pipeop_learnercv.R:332:3', 'test_pipeop_learnercv.R:359:3', 'test_pipeop_learnercv.R:389:3', 'test_pipeop_learnercv.R:399:3', 'test_pipeop_learnercv.R:432:3', 'test_pipeop_learnercv.R:472:3', 'test_pipeop_learnercv.R:481:3', 'test_pipeop_learnercv.R:498:3', 'test_pipeop_learnercv.R:506:3', 'test_pipeop_learnercv.R:530:3', 'test_pipeop_learnercv.R:554:3', 'test_pipeop_learnercv.R:634:3', 'test_pipeop_learnercv.R:654:3', 'test_pipeop_learnercv.R:669:3', 'test_pipeop_learnercv.R:754:3', 'test_pipeop_learnercv.R:799:3', 'test_pipeop_learnercv.R:827:3', 'test_pipeop_ovr.R:9:3', 'test_pipeop_ovr.R:48:3', 'test_pipeop_pca.R:8:3', 'test_pipeop_proxy.R:2:1', 'test_pipeop_quantilebin.R:5:3', 'test_pipeop_randomprojection.R:6:3', 'test_pipeop_randomresponse.R:5:3', 'test_pipeop_removeconstants.R:6:3', 'test_pipeop_renamecolumns.R:6:3', 'test_pipeop_replicate.R:9:3', 'test_pipeop_rowapply.R:6:3', 'test_pipeop_scale.R:6:3', 'test_pipeop_scale.R:10:3', 'test_pipeop_scalemaxabs.R:6:3', 'test_pipeop_scalerange.R:7:3', 'test_pipeop_select.R:9:3', 'test_pipeop_smote.R:10:3', 'test_pipeop_smotenc.R:8:3', 'test_pipeop_spatialsign.R:3:1', 'test_pipeop_splines.R:3:1', 'test_pipeop_nmf.R:6:3', 'test_pipeop_subsample.R:6:3', 'test_pipeop_targetinvert.R:4:3', 'test_pipeop_targettrafo.R:4:3', 'test_pipeop_targetmutate.R:5:3', 'test_pipeop_targettrafoscalerange.R:5:3', 'test_pipeop_task_preproc.R:4:3', 'test_pipeop_task_preproc.R:14:3', 'test_pipeop_tomek.R:7:3', 'test_pipeop_textvectorizer.R:37:3', 'test_pipeop_textvectorizer.R:186:3', 'test_pipeop_unbranch.R:10:3', 'test_pipeop_updatetarget.R:89:3', 'test_pipeop_vtreat.R:9:3', 'test_pipeop_yeojohnson.R:7:3', 'test_ppl.R:63:3', 'test_pipeop_tunethreshold.R:111:3', 'test_pipeop_tunethreshold.R:191:3', 'test_typecheck.R:188:3' • Skipping (1): 'test_GraphLearner.R:1278:3' • empty test (2): 'test_pipeop_isomap.R:111:1', 'test_pipeop_missind.R:101:1' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test_pipeop_datefeatures.R:7:3'): PipeOpDateFeatures - basic properties ── Error in `seq.Date(as.Date("2020-01-31"), length.out = 150L)`: exactly two of 'to', 'by' and 'length.out' / 'along.with' must be specified Backtrace: ▆ 1. ├─base::seq(as.Date("2020-01-31"), length.out = 150L) at test_pipeop_datefeatures.R:7:3 2. └─base::seq.Date(as.Date("2020-01-31"), length.out = 150L) ── Error ('test_pipeop_datefeatures.R:17:3'): PipeOpDateFeatures - finds POSIXct column ── Error in `seq.Date(as.Date("2020-01-31"), length.out = 150L)`: exactly two of 'to', 'by' and 'length.out' / 'along.with' must be specified Backtrace: ▆ 1. ├─base::seq(as.Date("2020-01-31"), length.out = 150L) at test_pipeop_datefeatures.R:17:3 2. └─base::seq.Date(as.Date("2020-01-31"), length.out = 150L) ── Error ('test_pipeop_nmf.R:45:3'): PipeOpNMF - does not modify search path when NMF is not loaded, fix for #929 ── Error in `detach(package:generics)`: invalid 'name' argument Backtrace: ▆ 1. └─base::detach(package:generics) at test_pipeop_nmf.R:45:3 ── Failure ('test_pipeop_nmf.R:73:3'): PipeOpNMF - does not modify search path when NMF is loaded, fix for #929 ── Expected `all(...)` to be TRUE. Differences: `actual`: FALSE `expected`: TRUE ── Failure ('test_pipeop_nmf.R:93:3'): PipeOpNMF - does not modify search path when some of NMF's dependencies are loaded, fix for #929 ── Expected `all(paste0("package:", c("BiocGenerics", "generics")) %in% search())` to be TRUE. Differences: `actual`: FALSE `expected`: TRUE ── Error ('test_pipeop_nmf.R:98:3'): PipeOpNMF - does not modify search path when some of NMF's dependencies are loaded, fix for #929 ── Error in `FUN(X[[i]], ...)`: invalid 'name' argument This happened in PipeOp nmf's $train() Backtrace: ▆ 1. ├─op$train(list(tsk("iris"))) at test_pipeop_nmf.R:98:3 2. │ └─mlr3pipelines:::.__PipeOp__train(...) 3. │ ├─base::withCallingHandlers(...) 4. │ └─private$.train(input) 5. │ └─mlr3pipelines:::.__PipeOpTaskPreproc__.train(...) 6. │ └─private$.train_task(intask) 7. │ └─mlr3pipelines:::.__PipeOpTaskPreproc__.train_task(...) 8. │ ├─data.table::as.data.table(...) 9. │ └─private$.train_dt(dt, task$levels(cols), task$truth()) 10. │ └─mlr3pipelines:::.__PipeOpNMF__.train_dt(...) 11. │ └─mlr3misc::map(to_be_detached, detach, character.only = TRUE) 12. │ └─base::lapply(.x, .f, ...) 13. │ └─base (local) FUN(X[[i]], ...) 14. │ └─base::stop("invalid 'name' argument") 15. └─base::.handleSimpleError(...) 16. └─mlr3pipelines (local) h(simpleError(msg, call)) [ FAIL 6 | WARN 0 | SKIP 128 | PASS 8754 ] Error: ! Test failures. Execution halted Flavor: r-oldrel-macos-arm64

Version: 0.11.0
Check: tests
Result: ERROR Running ‘testthat.R’ [272s/249s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > if (requireNamespace("testthat", quietly = TRUE)) { + library("checkmate") + library("testthat") + library("mlr3") + library("paradox") + library("mlr3pipelines") + test_check("mlr3pipelines") + } Starting 2 test processes. > test_Graph.R: Training debug.multi with input list(input_1 = 1, input_2 = 1) > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_multiplicities.R: > test_multiplicities.R: [[1]] > test_multiplicities.R: [1] 0 > test_multiplicities.R: > test_multiplicities.R: > test_pipeop_blsmote.R: [1] "Borderline-SMOTE done" > test_pipeop_blsmote.R: [1] "Borderline-SMOTE done" > test_pipeop_blsmote.R: [1] > test_pipeop_blsmote.R: "Borderline-SMOTE done" > test_pipeop_blsmote.R: [1] "Borderline-SMOTE done" Saving _problems/test_pipeop_datefeatures-7.R Saving _problems/test_pipeop_datefeatures-17.R > test_pipeop_isomap.R: 2026-04-15 08:23:37.076189: Isomap START > test_pipeop_isomap.R: 2026-04-15 08:23:37.076693: constructing knn graph > test_pipeop_isomap.R: 2026-04-15 08:23:37.087605: calculating geodesic distances > test_pipeop_isomap.R: 2026-04-15 08:23:37.107282: Classical Scaling > test_pipeop_isomap.R: 2026-04-15 08:23:37.170046: Isomap START > test_pipeop_isomap.R: 2026-04-15 08:23:37.170337: constructing knn graph > test_pipeop_isomap.R: 2026-04-15 08:23:37.180853: calculating geodesic distances > test_pipeop_isomap.R: 2026-04-15 08:23:37.201361: Classical Scaling > test_pipeop_isomap.R: 2026-04-15 08:23:37.24386: L-Isomap embed START > test_pipeop_isomap.R: 2026-04-15 08:23:37.244306: constructing knn graph > test_pipeop_isomap.R: 2026-04-15 08:23:37.272957: calculating geodesic distances > test_pipeop_isomap.R: 2026-04-15 08:23:37.337095: embedding > test_pipeop_isomap.R: 2026-04-15 08:23:37.338449: DONE > test_pipeop_isomap.R: 2026-04-15 08:23:37.398847: L-Isomap embed START > test_pipeop_isomap.R: 2026-04-15 08:23:37.399214: constructing knn graph > test_pipeop_isomap.R: 2026-04-15 08:23:37.417622: calculating geodesic distances > test_pipeop_isomap.R: 2026-04-15 08:23:37.473877: embedding > test_pipeop_isomap.R: 2026-04-15 08:23:37.480645: DONE > test_pipeop_isomap.R: 2026-04-15 08:23:37.707639: Isomap START > test_pipeop_isomap.R: 2026-04-15 08:23:37.708062: constructing knn graph > test_pipeop_isomap.R: 2026-04-15 08:23:37.74519: calculating geodesic distances > test_pipeop_isomap.R: 2026-04-15 08:23:37.924371: Classical Scaling > test_pipeop_isomap.R: 2026-04-15 08:23:37.975744: L-Isomap embed START > test_pipeop_isomap.R: 2026-04-15 08:23:37.976818: constructing knn graph > test_pipeop_isomap.R: 2026-04-15 08:23:38.032138: calculating geodesic distances > test_pipeop_isomap.R: 2026-04-15 08:23:38.392906: embedding > test_pipeop_isomap.R: 2026-04-15 08:23:38.400411: DONE > test_pipeop_isomap.R: 2026-04-15 08:23:38.56966: Isomap START > test_pipeop_isomap.R: 2026-04-15 08:23:38.569951: constructing knn graph > test_pipeop_isomap.R: 2026-04-15 08:23:38.609052: calculating geodesic distances > test_pipeop_isomap.R: 2026-04-15 08:23:38.635205: Classical Scaling > test_pipeop_isomap.R: 2026-04-15 08:23:38.674156: L-Isomap embed START > test_pipeop_isomap.R: 2026-04-15 08:23:38.674574: constructing knn graph > test_pipeop_isomap.R: 2026-04-15 08:23:38.693299: calculating geodesic distances > test_pipeop_isomap.R: 2026-04-15 08:23:38.739367: embedding > test_pipeop_isomap.R: 2026-04-15 08:23:38.740523: DONE > test_pipeop_isomap.R: 2026-04-15 08:23:38.920635: Isomap START > test_pipeop_isomap.R: 2026-04-15 08:23:38.92093: constructing knn graph > test_pipeop_isomap.R: 2026-04-15 08:23:38.934484: calculating geodesic distances > test_pipeop_isomap.R: 2026-04-15 08:23:38.966801: Classical Scaling > test_pipeop_isomap.R: 2026-04-15 08:23:39.028388: L-Isomap embed START > test_pipeop_isomap.R: 2026-04-15 08:23:39.028919: constructing knn graph > test_pipeop_isomap.R: 2026-04-15 08:23:39.054408: calculating geodesic distances > test_pipeop_isomap.R: 2026-04-15 08:23:39.13769: embedding > test_pipeop_isomap.R: 2026-04-15 08:23:39.138826: DONE > test_pipeop_isomap.R: 2026-04-15 08:23:39.240341: Isomap START > test_pipeop_isomap.R: 2026-04-15 08:23:39.24063: constructing knn graph > test_pipeop_isomap.R: 2026-04-15 08:23:39.247695: calculating geodesic distances > test_pipeop_isomap.R: 2026-04-15 08:23:39.272262: Classical Scaling > test_pipeop_isomap.R: 2026-04-15 08:23:39.364437: L-Isomap embed START > test_pipeop_isomap.R: 2026-04-15 08:23:39.364874: constructing knn graph > test_pipeop_isomap.R: 2026-04-15 08:23:39.39774: calculating geodesic distances > test_pipeop_isomap.R: 2026-04-15 08:23:39.471662: embedding > test_pipeop_isomap.R: 2026-04-15 08:23:39.472838: DONE > test_pipeop_isomap.R: 2026-04-15 08:23:39.579397: Isomap START > test_pipeop_isomap.R: 2026-04-15 08:23:39.579692: constructing knn graph > test_pipeop_isomap.R: 2026-04-15 08:23:39.597566: calculating geodesic distances > test_pipeop_isomap.R: 2026-04-15 08:23:39.619292: Classical Scaling > test_pipeop_isomap.R: 2026-04-15 08:23:39.669468: L-Isomap embed START > test_pipeop_isomap.R: 2026-04-15 08:23:39.669901: constructing knn graph > test_pipeop_isomap.R: 2026-04-15 08:23:39.689624: calculating geodesic distances > test_pipeop_isomap.R: 2026-04-15 08:23:39.747893: embedding > test_pipeop_isomap.R: 2026-04-15 08:23:39.750123: DONE > test_pipeop_isomap.R: 2026-04-15 08:23:39.839807: Isomap START > test_pipeop_isomap.R: 2026-04-15 08:23:39.840134: constructing knn graph > test_pipeop_isomap.R: 2026-04-15 08:23:39.852188: calculating geodesic distances > test_pipeop_isomap.R: 2026-04-15 08:23:39.879899: Classical Scaling > test_pipeop_isomap.R: 2026-04-15 08:23:39.930198: L-Isomap embed START > test_pipeop_isomap.R: 2026-04-15 08:23:39.930625: constructing knn graph > test_pipeop_isomap.R: 2026-04-15 08:23:39.96258: calculating geodesic distances > test_pipeop_isomap.R: 2026-04-15 08:23:40.019574: embedding > test_pipeop_isomap.R: 2026-04-15 08:23:40.021146: DONE > test_pipeop_isomap.R: 2026-04-15 08:23:40.157664: Isomap START > test_pipeop_isomap.R: 2026-04-15 08:23:40.158454: constructing knn graph > test_pipeop_isomap.R: 2026-04-15 08:23:40.165881: calculating geodesic distances > test_pipeop_isomap.R: 2026-04-15 08:23:40.202228: Classical Scaling > test_pipeop_isomap.R: 2026-04-15 08:23:40.296538: Isomap START > test_pipeop_isomap.R: 2026-04-15 08:23:40.296848: constructing knn graph > test_pipeop_isomap.R: 2026-04-15 08:23:40.310902: calculating geodesic distances > test_pipeop_isomap.R: 2026-04-15 08:23:40.33131: Classical Scaling > test_pipeop_isomap.R: 2026-04-15 08:23:40.347928: Isomap START > test_pipeop_isomap.R: 2026-04-15 08:23:40.348212: constructing knn graph > test_pipeop_isomap.R: 2026-04-15 08:23:40.355212: calculating geodesic distances > test_pipeop_isomap.R: 2026-04-15 08:23:40.395649: Classical Scaling Saving _problems/test_pipeop_nmf-45.R Saving _problems/test_pipeop_nmf-73.R Saving _problems/test_pipeop_nmf-93.R Saving _problems/test_pipeop_nmf-98.R > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols > test_pipeop_task_preproc.R: Training debug_affectcols [ FAIL 6 | WARN 0 | SKIP 128 | PASS 8754 ] ══ Skipped tests (128) ═════════════════════════════════════════════════════════ • On CRAN (125): 'test_CnfFormula_simplify.R:6:3', 'test_CnfFormula.R:591:3', 'test_Graph.R:283:3', 'test_PipeOp.R:32:1', 'test_GraphLearner.R:5:3', 'test_GraphLearner.R:221:3', 'test_GraphLearner.R:343:3', 'test_GraphLearner.R:408:3', 'test_GraphLearner.R:571:3', 'test_doublearrow.R:2:1', 'test_gunion.R:2:1', 'test_learner_weightedaverage.R:5:3', 'test_learner_weightedaverage.R:57:3', 'test_learner_weightedaverage.R:105:3', 'test_learner_weightedaverage.R:152:3', 'test_meta.R:39:3', 'test_dictionary.R:7:3', 'test_mlr_graphs_branching.R:26:3', 'test_mlr_graphs_bagging.R:6:3', 'test_mlr_graphs_robustify.R:5:3', 'test_pipeop_adas.R:8:3', 'test_pipeop_blsmote.R:8:3', 'test_pipeop_branch.R:4:3', 'test_pipeop_chunk.R:4:3', 'test_pipeop_classbalancing.R:7:3', 'test_pipeop_boxcox.R:7:3', 'test_pipeop_classweights.R:10:3', 'test_pipeop_classweightsex.R:9:3', 'test_pipeop_collapsefactors.R:6:3', 'test_pipeop_colapply.R:9:3', 'test_pipeop_copy.R:5:3', 'test_pipeop_colroles.R:6:3', 'test_pipeop_decode.R:14:3', 'test_pipeop_encode.R:21:3', 'test_pipeop_encodeimpact.R:11:3', 'test_pipeop_encodepl.R:5:3', 'test_pipeop_encodepl.R:72:3', 'test_pipeop_ensemble.R:3:1', 'test_pipeop_encodelmer.R:15:3', 'test_pipeop_encodelmer.R:37:3', 'test_pipeop_encodelmer.R:80:3', 'test_pipeop_filter.R:7:3', 'test_pipeop_fixfactors.R:9:3', 'test_pipeop_histbin.R:7:3', 'test_pipeop_ica.R:7:3', 'test_pipeop_featureunion.R:9:3', 'test_pipeop_featureunion.R:134:3', 'test_pipeop_impute.R:4:3', 'test_pipeop_info.R:3:1', 'test_pipeop_imputelearner.R:43:3', 'test_pipeop_kernelpca.R:9:3', 'test_pipeop_isomap.R:10:3', 'test_pipeop_learner.R:17:3', 'test_pipeop_learnerpicvplus.R:2:1', 'test_pipeop_missind.R:6:3', 'test_pipeop_modelmatrix.R:7:3', 'test_pipeop_multiplicityexply.R:9:3', 'test_pipeop_multiplicityimply.R:9:3', 'test_pipeop_mutate.R:9:3', 'test_pipeop_nearmiss.R:7:3', 'test_pipeop_learnercv.R:3:3', 'test_pipeop_learnercv.R:43:3', 'test_pipeop_learnercv.R:73:3', 'test_pipeop_learnercv.R:92:3', 'test_pipeop_learnercv.R:141:3', 'test_pipeop_learnercv.R:157:3', 'test_pipeop_learnercv.R:203:3', 'test_pipeop_learnercv.R:249:3', 'test_pipeop_learnercv.R:278:3', 'test_pipeop_learnercv.R:332:3', 'test_pipeop_learnercv.R:359:3', 'test_pipeop_learnercv.R:389:3', 'test_pipeop_learnercv.R:399:3', 'test_pipeop_learnercv.R:432:3', 'test_pipeop_learnercv.R:472:3', 'test_pipeop_learnercv.R:481:3', 'test_pipeop_learnercv.R:498:3', 'test_pipeop_learnercv.R:506:3', 'test_pipeop_learnercv.R:530:3', 'test_pipeop_learnercv.R:554:3', 'test_pipeop_learnercv.R:634:3', 'test_pipeop_learnercv.R:654:3', 'test_pipeop_learnercv.R:669:3', 'test_pipeop_learnercv.R:754:3', 'test_pipeop_learnercv.R:799:3', 'test_pipeop_learnercv.R:827:3', 'test_pipeop_ovr.R:9:3', 'test_pipeop_ovr.R:48:3', 'test_pipeop_pca.R:8:3', 'test_pipeop_proxy.R:2:1', 'test_pipeop_quantilebin.R:5:3', 'test_pipeop_randomprojection.R:6:3', 'test_pipeop_randomresponse.R:5:3', 'test_pipeop_removeconstants.R:6:3', 'test_pipeop_renamecolumns.R:6:3', 'test_pipeop_replicate.R:9:3', 'test_pipeop_nmf.R:6:3', 'test_pipeop_rowapply.R:6:3', 'test_pipeop_scale.R:6:3', 'test_pipeop_scale.R:10:3', 'test_pipeop_scalemaxabs.R:6:3', 'test_pipeop_scalerange.R:7:3', 'test_pipeop_select.R:9:3', 'test_pipeop_smote.R:10:3', 'test_pipeop_spatialsign.R:3:1', 'test_pipeop_splines.R:3:1', 'test_pipeop_smotenc.R:8:3', 'test_pipeop_targetinvert.R:4:3', 'test_pipeop_targetmutate.R:5:3', 'test_pipeop_targettrafo.R:4:3', 'test_pipeop_targettrafoscalerange.R:5:3', 'test_pipeop_task_preproc.R:4:3', 'test_pipeop_task_preproc.R:14:3', 'test_pipeop_subsample.R:6:3', 'test_pipeop_tomek.R:7:3', 'test_pipeop_textvectorizer.R:37:3', 'test_pipeop_textvectorizer.R:186:3', 'test_pipeop_unbranch.R:10:3', 'test_pipeop_updatetarget.R:89:3', 'test_pipeop_vtreat.R:9:3', 'test_pipeop_yeojohnson.R:7:3', 'test_ppl.R:63:3', 'test_pipeop_tunethreshold.R:111:3', 'test_pipeop_tunethreshold.R:191:3', 'test_typecheck.R:188:3' • Skipping (1): 'test_GraphLearner.R:1278:3' • empty test (2): 'test_pipeop_isomap.R:111:1', 'test_pipeop_missind.R:101:1' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test_pipeop_datefeatures.R:7:3'): PipeOpDateFeatures - basic properties ── Error in `seq.Date(as.Date("2020-01-31"), length.out = 150L)`: exactly two of 'to', 'by' and 'length.out' / 'along.with' must be specified Backtrace: ▆ 1. ├─base::seq(as.Date("2020-01-31"), length.out = 150L) at test_pipeop_datefeatures.R:7:3 2. └─base::seq.Date(as.Date("2020-01-31"), length.out = 150L) ── Error ('test_pipeop_datefeatures.R:17:3'): PipeOpDateFeatures - finds POSIXct column ── Error in `seq.Date(as.Date("2020-01-31"), length.out = 150L)`: exactly two of 'to', 'by' and 'length.out' / 'along.with' must be specified Backtrace: ▆ 1. ├─base::seq(as.Date("2020-01-31"), length.out = 150L) at test_pipeop_datefeatures.R:17:3 2. └─base::seq.Date(as.Date("2020-01-31"), length.out = 150L) ── Error ('test_pipeop_nmf.R:45:3'): PipeOpNMF - does not modify search path when NMF is not loaded, fix for #929 ── Error in `detach(package:generics)`: invalid 'name' argument Backtrace: ▆ 1. └─base::detach(package:generics) at test_pipeop_nmf.R:45:3 ── Failure ('test_pipeop_nmf.R:73:3'): PipeOpNMF - does not modify search path when NMF is loaded, fix for #929 ── Expected `all(...)` to be TRUE. Differences: `actual`: FALSE `expected`: TRUE ── Failure ('test_pipeop_nmf.R:93:3'): PipeOpNMF - does not modify search path when some of NMF's dependencies are loaded, fix for #929 ── Expected `all(paste0("package:", c("BiocGenerics", "generics")) %in% search())` to be TRUE. Differences: `actual`: FALSE `expected`: TRUE ── Error ('test_pipeop_nmf.R:98:3'): PipeOpNMF - does not modify search path when some of NMF's dependencies are loaded, fix for #929 ── Error in `FUN(X[[i]], ...)`: invalid 'name' argument This happened in PipeOp nmf's $train() Backtrace: ▆ 1. ├─op$train(list(tsk("iris"))) at test_pipeop_nmf.R:98:3 2. │ └─mlr3pipelines:::.__PipeOp__train(...) 3. │ ├─base::withCallingHandlers(...) 4. │ └─private$.train(input) 5. │ └─mlr3pipelines:::.__PipeOpTaskPreproc__.train(...) 6. │ └─private$.train_task(intask) 7. │ └─mlr3pipelines:::.__PipeOpTaskPreproc__.train_task(...) 8. │ ├─data.table::as.data.table(...) 9. │ └─private$.train_dt(dt, task$levels(cols), task$truth()) 10. │ └─mlr3pipelines:::.__PipeOpNMF__.train_dt(...) 11. │ └─mlr3misc::map(to_be_detached, detach, character.only = TRUE) 12. │ └─base::lapply(.x, .f, ...) 13. │ └─base (local) FUN(X[[i]], ...) 14. │ └─base::stop("invalid 'name' argument") 15. └─base::.handleSimpleError(...) 16. └─mlr3pipelines (local) h(simpleError(msg, call)) [ FAIL 6 | WARN 0 | SKIP 128 | PASS 8754 ] Error: ! Test failures. Execution halted Flavor: r-oldrel-macos-x86_64

Version: 0.11.0
Check: tests
Result: ERROR Running 'testthat.R' [100s] Running the tests in 'tests/testthat.R' failed. Complete output: > if (requireNamespace("testthat", quietly = TRUE)) { + library("checkmate") + library("testthat") + library("mlr3") + library("paradox") + library("mlr3pipelines") + test_check("mlr3pipelines") + } Starting 2 test processes. > test_Graph.R: Training debug.multi with input list(input_1 = 1, input_2 = 1) > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_PipeOp.R: Training test_autotrain > test_PipeOp.R: Predicting test_autotrain > test_multiplicities.R: > test_multiplicities.R: [[1]] > test_multiplicities.R: > test_multiplicities.R: [1] 0 > test_multiplicities.R: > test_pipeop_blsmote.R: [1] "Borderline-SMOTE done" > test_pipeop_blsmote.R: [1] "Borderline-SMOTE done" > test_pipeop_blsmote.R: [1] "Borderline-SMOTE done" > test_pipeop_blsmote.R: [1] "Borderline-SMOTE done" Saving _problems/test_pipeop_datefeatures-7.R Saving _problems/test_pipeop_datefeatures-17.R > test_pipeop_histbin.R: Error: ! testthat subprocess exited in file 'test_pipeop_histbin.R'. Caused by error: ! R session crashed with exit code -1073741819 Backtrace: ▆ 1. └─testthat::test_check("mlr3pipelines") 2. └─testthat::test_dir(...) 3. └─testthat:::test_files(...) 4. └─testthat:::test_files_parallel(...) 5. ├─withr::with_dir(...) 6. │ └─base::force(code) 7. ├─testthat::with_reporter(...) 8. │ └─base::tryCatch(...) 9. │ └─base (local) tryCatchList(expr, classes, parentenv, handlers) 10. │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]]) 11. │ └─base (local) doTryCatch(return(expr), name, parentenv, handler) 12. └─testthat:::parallel_event_loop_chunky(queue, reporters, ".") 13. └─queue$poll(Inf) 14. └─base::lapply(...) 15. └─testthat (local) FUN(X[[i]], ...) 16. └─private$handle_error(msg, i) 17. └─cli::cli_abort(...) 18. └─rlang::abort(...) Execution halted Flavor: r-oldrel-windows-x86_64

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