Last updated on 2026-03-04 05:51:58 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.11.0 | 39.03 | 729.79 | 768.82 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.11.0 | 24.97 | 467.93 | 492.90 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.11.0 | 69.00 | 1188.07 | 1257.07 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 0.11.0 | 66.00 | 1215.06 | 1281.06 | OK | |
| r-devel-macos-arm64 | 0.11.0 | 8.00 | 120.00 | 128.00 | OK | |
| r-devel-windows-x86_64 | 0.11.0 | 37.00 | 488.00 | 525.00 | OK | |
| r-patched-linux-x86_64 | 0.10.0 | 52.10 | 746.38 | 798.48 | OK | |
| r-release-linux-x86_64 | 0.10.0 | 36.68 | 734.52 | 771.20 | OK | |
| r-release-macos-arm64 | 0.11.0 | 8.00 | 113.00 | 121.00 | OK | |
| r-release-macos-x86_64 | 0.11.0 | 28.00 | 883.00 | 911.00 | OK | |
| r-release-windows-x86_64 | 0.11.0 | 37.00 | 370.00 | 407.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.11.0 | 8.00 | 108.00 | 116.00 | ERROR | |
| r-oldrel-macos-x86_64 | 0.11.0 | 24.00 | 593.00 | 617.00 | ERROR | |
| r-oldrel-windows-x86_64 | 0.11.0 | 54.00 | 624.00 | 678.00 | ERROR |
Version: 0.11.0
Check: tests
Result: ERROR
Running 'testthat.R' [34s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> if (requireNamespace("testthat", quietly = TRUE)) {
+ library("checkmate")
+ library("testthat")
+ library("mlr3")
+ library("paradox")
+ library("mlr3pipelines")
+ test_check("mlr3pipelines")
+ }
Starting 2 test processes.
> test_Graph.R: Training debug.multi with input list(input_1 = 1, input_2 = 1)
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_mlr_graphs_convert_types.R:
Error:
! testthat subprocess exited in file 'test_mlr_graphs_convert_types.R'.
Caused by error:
! R session crashed with exit code -1073741819
Backtrace:
▆
1. └─testthat::test_check("mlr3pipelines")
2. └─testthat::test_dir(...)
3. └─testthat:::test_files(...)
4. └─testthat:::test_files_parallel(...)
5. ├─withr::with_dir(...)
6. │ └─base::force(code)
7. ├─testthat::with_reporter(...)
8. │ └─base::tryCatch(...)
9. │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
10. │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
11. │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
12. └─testthat:::parallel_event_loop_chunky(queue, reporters, ".")
13. └─queue$poll(Inf)
14. └─base::lapply(...)
15. └─testthat (local) FUN(X[[i]], ...)
16. └─private$handle_error(msg, i)
17. └─cli::cli_abort(...)
18. └─rlang::abort(...)
Execution halted
Flavor: r-release-windows-x86_64
Version: 0.11.0
Check: examples
Result: ERROR
Running examples in ‘mlr3pipelines-Ex.R’ failed
The error most likely occurred in:
> ### Name: mlr_pipeops_nmf
> ### Title: Non-negative Matrix Factorization
> ### Aliases: mlr_pipeops_nmf PipeOpNMF
>
> ### ** Examples
>
> ## Don't show:
> if (mlr3misc::require_namespaces(c("NMF", "MASS"), quietly = TRUE)) withAutoprint({ # examplesIf
+ ## End(Don't show)
+ ## Don't show:
+ # NMF attaches these packages to search path on load, #929
+ lapply(c("package:Biobase", "package:BiocGenerics", "package:generics"), detach, character.only = TRUE)
+ ## End(Don't show)
+ library("mlr3")
+
+ task = tsk("iris")
+ pop = po("nmf")
+
+ task$data()
+ pop$train(list(task))[[1]]$data()
+
+ pop$state
+ ## Don't show:
+ # BiocGenerics overwrites printer for our tables mlr-org/mlr3#1112
+ # Necessary as detaching packages does not remove registered S3 methods
+ suppressWarnings(try(rm("format.list", envir = .BaseNamespaceEnv$.__S3MethodsTable__.), silent = TRUE))
+ ## End(Don't show)
+ ## Don't show:
+ }) # examplesIf
> lapply(c("package:Biobase", "package:BiocGenerics", "package:generics"),
+ detach, character.only = TRUE)
Error in FUN(X[[i]], ...) : invalid 'name' argument
Calls: withAutoprint ... withVisible -> eval -> eval -> lapply -> lapply -> FUN
Execution halted
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 0.11.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [90s/44s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> if (requireNamespace("testthat", quietly = TRUE)) {
+ library("checkmate")
+ library("testthat")
+ library("mlr3")
+ library("paradox")
+ library("mlr3pipelines")
+ test_check("mlr3pipelines")
+ }
Starting 2 test processes.
> test_Graph.R: Training debug.multi with input list(input_1 = 1, input_2 = 1)
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_multiplicities.R:
> test_multiplicities.R: [[1]]
> test_multiplicities.R: [1] 0
> test_multiplicities.R:
> test_multiplicities.R:
> test_pipeop_blsmote.R: [1] "Borderline-SMOTE done"
> test_pipeop_blsmote.R: [1] "Borderline-SMOTE done"
> test_pipeop_blsmote.R: [1] "Borderline-SMOTE done"
> test_pipeop_blsmote.R: [1] "Borderline-SMOTE done"
Saving _problems/test_pipeop_datefeatures-7.R
Saving _problems/test_pipeop_datefeatures-17.R
> test_pipeop_isomap.R: 2026-03-04 16:03:05.005373: Isomap START
> test_pipeop_isomap.R: 2026-03-04 16:03:05.005657: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 16:03:05.008716: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 16:03:05.014815: Classical Scaling
> test_pipeop_isomap.R: 2026-03-04 16:03:05.026356: Isomap START
> test_pipeop_isomap.R: 2026-03-04 16:03:05.026486: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 16:03:05.028799: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 16:03:05.034796: Classical Scaling
> test_pipeop_isomap.R: 2026-03-04 16:03:05.042364: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-04 16:03:05.042544: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 16:03:05.047122: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 16:03:05.061967: embedding
> test_pipeop_isomap.R: 2026-03-04 16:03:05.062356: DONE
> test_pipeop_isomap.R: 2026-03-04 16:03:05.068832: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-04 16:03:05.068969: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 16:03:05.07803: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 16:03:05.092833: embedding
> test_pipeop_isomap.R: 2026-03-04 16:03:05.093284: DONE
> test_pipeop_isomap.R: 2026-03-04 16:03:05.117156: Isomap START
> test_pipeop_isomap.R: 2026-03-04 16:03:05.117267: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 16:03:05.121382: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 16:03:05.155158: Classical Scaling
> test_pipeop_isomap.R: 2026-03-04 16:03:05.164337: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-04 16:03:05.16453: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 16:03:05.178707: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 16:03:05.259497: embedding
> test_pipeop_isomap.R: 2026-03-04 16:03:05.260679: DONE
> test_pipeop_isomap.R: 2026-03-04 16:03:05.327119: Isomap START
> test_pipeop_isomap.R: 2026-03-04 16:03:05.327264: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 16:03:05.329514: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 16:03:05.335609: Classical Scaling
> test_pipeop_isomap.R: 2026-03-04 16:03:05.342887: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-04 16:03:05.343045: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 16:03:05.347414: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 16:03:05.361979: embedding
> test_pipeop_isomap.R: 2026-03-04 16:03:05.362329: DONE
> test_pipeop_isomap.R: 2026-03-04 16:03:05.393704: Isomap START
> test_pipeop_isomap.R: 2026-03-04 16:03:05.393826: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 16:03:05.396357: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 16:03:05.402402: Classical Scaling
> test_pipeop_isomap.R: 2026-03-04 16:03:05.414051: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-04 16:03:05.414333: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 16:03:05.423652: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 16:03:05.438628: embedding
> test_pipeop_isomap.R: 2026-03-04 16:03:05.439066: DONE
> test_pipeop_isomap.R: 2026-03-04 16:03:05.460874: Isomap START
> test_pipeop_isomap.R: 2026-03-04 16:03:05.461008: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 16:03:05.463236: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 16:03:05.469298: Classical Scaling
> test_pipeop_isomap.R: 2026-03-04 16:03:05.480172: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-04 16:03:05.480348: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 16:03:05.484656: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 16:03:05.499339: embedding
> test_pipeop_isomap.R: 2026-03-04 16:03:05.499691: DONE
> test_pipeop_isomap.R: 2026-03-04 16:03:05.527974: Isomap START
> test_pipeop_isomap.R: 2026-03-04 16:03:05.528116: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 16:03:05.530426: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 16:03:05.536467: Classical Scaling
> test_pipeop_isomap.R: 2026-03-04 16:03:05.548471: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-04 16:03:05.548664: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 16:03:05.55301: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 16:03:05.567818: embedding
> test_pipeop_isomap.R: 2026-03-04 16:03:05.56829: DONE
> test_pipeop_isomap.R: 2026-03-04 16:03:05.586722: Isomap START
> test_pipeop_isomap.R: 2026-03-04 16:03:05.586855: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 16:03:05.589151: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 16:03:05.595136: Classical Scaling
> test_pipeop_isomap.R: 2026-03-04 16:03:05.616543: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-04 16:03:05.61673: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 16:03:05.621334: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 16:03:05.636323: embedding
> test_pipeop_isomap.R: 2026-03-04 16:03:05.636693: DONE
> test_pipeop_isomap.R: 2026-03-04 16:03:05.654692: Isomap START
> test_pipeop_isomap.R: 2026-03-04 16:03:05.654827: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 16:03:05.657066: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 16:03:05.663132: Classical Scaling
> test_pipeop_isomap.R: 2026-03-04 16:03:05.681874: Isomap START
> test_pipeop_isomap.R: 2026-03-04 16:03:05.682004: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 16:03:05.688863: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 16:03:05.695387: Classical Scaling
> test_pipeop_isomap.R: 2026-03-04 16:03:05.704146: Isomap START
> test_pipeop_isomap.R: 2026-03-04 16:03:05.704273: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 16:03:05.706461: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 16:03:05.712448: Classical Scaling
Saving _problems/test_pipeop_nmf-45.R
Saving _problems/test_pipeop_nmf-73.R
Saving _problems/test_pipeop_nmf-93.R
Saving _problems/test_pipeop_nmf-98.R
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
[ FAIL 6 | WARN 0 | SKIP 128 | PASS 8754 ]
══ Skipped tests (128) ═════════════════════════════════════════════════════════
• On CRAN (125): 'test_CnfFormula_simplify.R:6:3', 'test_CnfFormula.R:591:3',
'test_Graph.R:283:3', 'test_PipeOp.R:32:1', 'test_GraphLearner.R:5:3',
'test_GraphLearner.R:221:3', 'test_GraphLearner.R:343:3',
'test_GraphLearner.R:408:3', 'test_GraphLearner.R:571:3',
'test_doublearrow.R:2:1', 'test_gunion.R:2:1',
'test_learner_weightedaverage.R:5:3', 'test_learner_weightedaverage.R:57:3',
'test_learner_weightedaverage.R:105:3',
'test_learner_weightedaverage.R:152:3', 'test_meta.R:39:3',
'test_dictionary.R:7:3', 'test_mlr_graphs_branching.R:26:3',
'test_mlr_graphs_bagging.R:6:3', 'test_mlr_graphs_robustify.R:5:3',
'test_pipeop_blsmote.R:8:3', 'test_pipeop_adas.R:8:3',
'test_pipeop_branch.R:4:3', 'test_pipeop_chunk.R:4:3',
'test_pipeop_classbalancing.R:7:3', 'test_pipeop_boxcox.R:7:3',
'test_pipeop_classweights.R:10:3', 'test_pipeop_classweightsex.R:9:3',
'test_pipeop_collapsefactors.R:6:3', 'test_pipeop_colapply.R:9:3',
'test_pipeop_copy.R:5:3', 'test_pipeop_colroles.R:6:3',
'test_pipeop_decode.R:14:3', 'test_pipeop_encode.R:21:3',
'test_pipeop_encodeimpact.R:11:3', 'test_pipeop_encodepl.R:5:3',
'test_pipeop_encodepl.R:72:3', 'test_pipeop_ensemble.R:3:1',
'test_pipeop_encodelmer.R:15:3', 'test_pipeop_encodelmer.R:37:3',
'test_pipeop_encodelmer.R:80:3', 'test_pipeop_featureunion.R:9:3',
'test_pipeop_featureunion.R:134:3', 'test_pipeop_fixfactors.R:9:3',
'test_pipeop_filter.R:7:3', 'test_pipeop_histbin.R:7:3',
'test_pipeop_ica.R:7:3', 'test_pipeop_impute.R:4:3',
'test_pipeop_imputelearner.R:43:3', 'test_pipeop_info.R:3:1',
'test_pipeop_kernelpca.R:9:3', 'test_pipeop_isomap.R:10:3',
'test_pipeop_learner.R:17:3', 'test_pipeop_learnerpicvplus.R:2:1',
'test_pipeop_missind.R:6:3', 'test_pipeop_modelmatrix.R:7:3',
'test_pipeop_multiplicityexply.R:9:3', 'test_pipeop_multiplicityimply.R:9:3',
'test_pipeop_mutate.R:9:3', 'test_pipeop_nearmiss.R:7:3',
'test_pipeop_learnercv.R:3:3', 'test_pipeop_learnercv.R:43:3',
'test_pipeop_learnercv.R:73:3', 'test_pipeop_learnercv.R:92:3',
'test_pipeop_learnercv.R:141:3', 'test_pipeop_learnercv.R:157:3',
'test_pipeop_learnercv.R:203:3', 'test_pipeop_learnercv.R:249:3',
'test_pipeop_learnercv.R:278:3', 'test_pipeop_learnercv.R:332:3',
'test_pipeop_learnercv.R:359:3', 'test_pipeop_learnercv.R:389:3',
'test_pipeop_learnercv.R:399:3', 'test_pipeop_learnercv.R:432:3',
'test_pipeop_learnercv.R:472:3', 'test_pipeop_learnercv.R:481:3',
'test_pipeop_learnercv.R:498:3', 'test_pipeop_learnercv.R:506:3',
'test_pipeop_learnercv.R:530:3', 'test_pipeop_learnercv.R:554:3',
'test_pipeop_learnercv.R:634:3', 'test_pipeop_learnercv.R:654:3',
'test_pipeop_learnercv.R:669:3', 'test_pipeop_learnercv.R:754:3',
'test_pipeop_learnercv.R:799:3', 'test_pipeop_learnercv.R:827:3',
'test_pipeop_ovr.R:9:3', 'test_pipeop_ovr.R:48:3', 'test_pipeop_pca.R:8:3',
'test_pipeop_proxy.R:2:1', 'test_pipeop_quantilebin.R:5:3',
'test_pipeop_randomprojection.R:6:3', 'test_pipeop_randomresponse.R:5:3',
'test_pipeop_removeconstants.R:6:3', 'test_pipeop_renamecolumns.R:6:3',
'test_pipeop_replicate.R:9:3', 'test_pipeop_rowapply.R:6:3',
'test_pipeop_scale.R:6:3', 'test_pipeop_scale.R:10:3',
'test_pipeop_scalemaxabs.R:6:3', 'test_pipeop_scalerange.R:7:3',
'test_pipeop_select.R:9:3', 'test_pipeop_smote.R:10:3',
'test_pipeop_smotenc.R:8:3', 'test_pipeop_spatialsign.R:3:1',
'test_pipeop_splines.R:3:1', 'test_pipeop_nmf.R:6:3',
'test_pipeop_targetinvert.R:4:3', 'test_pipeop_targetmutate.R:5:3',
'test_pipeop_targettrafo.R:4:3', 'test_pipeop_targettrafoscalerange.R:5:3',
'test_pipeop_task_preproc.R:4:3', 'test_pipeop_task_preproc.R:14:3',
'test_pipeop_subsample.R:6:3', 'test_pipeop_tomek.R:7:3',
'test_pipeop_textvectorizer.R:37:3', 'test_pipeop_textvectorizer.R:186:3',
'test_pipeop_unbranch.R:10:3', 'test_pipeop_updatetarget.R:89:3',
'test_pipeop_vtreat.R:9:3', 'test_pipeop_yeojohnson.R:7:3',
'test_ppl.R:63:3', 'test_pipeop_tunethreshold.R:111:3',
'test_pipeop_tunethreshold.R:191:3', 'test_typecheck.R:188:3'
• Skipping (1): 'test_GraphLearner.R:1278:3'
• empty test (2): 'test_pipeop_isomap.R:111:1', 'test_pipeop_missind.R:101:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_pipeop_datefeatures.R:7:3'): PipeOpDateFeatures - basic properties ──
Error in `seq.Date(as.Date("2020-01-31"), length.out = 150L)`: exactly two of 'to', 'by' and 'length.out' / 'along.with' must be specified
Backtrace:
▆
1. ├─base::seq(as.Date("2020-01-31"), length.out = 150L) at test_pipeop_datefeatures.R:7:3
2. └─base::seq.Date(as.Date("2020-01-31"), length.out = 150L)
── Error ('test_pipeop_datefeatures.R:17:3'): PipeOpDateFeatures - finds POSIXct column ──
Error in `seq.Date(as.Date("2020-01-31"), length.out = 150L)`: exactly two of 'to', 'by' and 'length.out' / 'along.with' must be specified
Backtrace:
▆
1. ├─base::seq(as.Date("2020-01-31"), length.out = 150L) at test_pipeop_datefeatures.R:17:3
2. └─base::seq.Date(as.Date("2020-01-31"), length.out = 150L)
── Error ('test_pipeop_nmf.R:45:3'): PipeOpNMF - does not modify search path when NMF is not loaded, fix for #929 ──
Error in `detach(package:generics)`: invalid 'name' argument
Backtrace:
▆
1. └─base::detach(package:generics) at test_pipeop_nmf.R:45:3
── Failure ('test_pipeop_nmf.R:73:3'): PipeOpNMF - does not modify search path when NMF is loaded, fix for #929 ──
Expected `all(...)` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Failure ('test_pipeop_nmf.R:93:3'): PipeOpNMF - does not modify search path when some of NMF's dependencies are loaded, fix for #929 ──
Expected `all(paste0("package:", c("BiocGenerics", "generics")) %in% search())` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Error ('test_pipeop_nmf.R:98:3'): PipeOpNMF - does not modify search path when some of NMF's dependencies are loaded, fix for #929 ──
Error in `FUN(X[[i]], ...)`: invalid 'name' argument
This happened in PipeOp nmf's $train()
Backtrace:
▆
1. ├─op$train(list(tsk("iris"))) at test_pipeop_nmf.R:98:3
2. │ └─mlr3pipelines:::.__PipeOp__train(...)
3. │ ├─base::withCallingHandlers(...)
4. │ └─private$.train(input)
5. │ └─mlr3pipelines:::.__PipeOpTaskPreproc__.train(...)
6. │ └─private$.train_task(intask)
7. │ └─mlr3pipelines:::.__PipeOpTaskPreproc__.train_task(...)
8. │ ├─data.table::as.data.table(...)
9. │ └─private$.train_dt(dt, task$levels(cols), task$truth())
10. │ └─mlr3pipelines:::.__PipeOpNMF__.train_dt(...)
11. │ └─mlr3misc::map(to_be_detached, detach, character.only = TRUE)
12. │ └─base::lapply(.x, .f, ...)
13. │ └─base (local) FUN(X[[i]], ...)
14. │ └─base::stop("invalid 'name' argument")
15. └─base::.handleSimpleError(...)
16. └─mlr3pipelines (local) h(simpleError(msg, call))
[ FAIL 6 | WARN 0 | SKIP 128 | PASS 8754 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-arm64
Version: 0.11.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [257s/303s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> if (requireNamespace("testthat", quietly = TRUE)) {
+ library("checkmate")
+ library("testthat")
+ library("mlr3")
+ library("paradox")
+ library("mlr3pipelines")
+ test_check("mlr3pipelines")
+ }
Starting 2 test processes.
> test_Graph.R: Training debug.multi with input list(input_1 = 1, input_2 = 1)
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_multiplicities.R:
> test_multiplicities.R:
> test_multiplicities.R: [[1]]
> test_multiplicities.R: [1] 0
> test_multiplicities.R:
> test_pipeop_blsmote.R: [1] "Borderline-SMOTE done"
> test_pipeop_blsmote.R: [1] "Borderline-SMOTE done"
> test_pipeop_blsmote.R: [1] "Borderline-SMOTE done"
> test_pipeop_blsmote.R: [1]
> test_pipeop_blsmote.R: "Borderline-SMOTE done"
Saving _problems/test_pipeop_datefeatures-7.R
Saving _problems/test_pipeop_datefeatures-17.R
> test_pipeop_isomap.R: 2026-03-03 22:52:42.423959: Isomap START
> test_pipeop_isomap.R: 2026-03-03 22:52:42.424458: constructing knn graph
> test_pipeop_isomap.R: 2026-03-03 22:52:42.4511: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-03 22:52:42.511251: Classical Scaling
> test_pipeop_isomap.R: 2026-03-03 22:52:42.617385: Isomap START
> test_pipeop_isomap.R: 2026-03-03 22:52:42.617672: constructing knn graph
> test_pipeop_isomap.R: 2026-03-03 22:52:42.640176: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-03 22:52:42.694489: Classical Scaling
> test_pipeop_isomap.R: 2026-03-03 22:52:42.743226: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-03 22:52:42.74364: constructing knn graph
> test_pipeop_isomap.R: 2026-03-03 22:52:42.779961: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-03 22:52:42.882231: embedding
> test_pipeop_isomap.R: 2026-03-03 22:52:42.883354: DONE
> test_pipeop_isomap.R: 2026-03-03 22:52:42.932485: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-03 22:52:42.932776: constructing knn graph
> test_pipeop_isomap.R: 2026-03-03 22:52:42.959518: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-03 22:52:43.054947: embedding
> test_pipeop_isomap.R: 2026-03-03 22:52:43.062062: DONE
> test_pipeop_isomap.R: 2026-03-03 22:52:43.229411: Isomap START
> test_pipeop_isomap.R: 2026-03-03 22:52:43.229712: constructing knn graph
> test_pipeop_isomap.R: 2026-03-03 22:52:43.257391: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-03 22:52:43.540722: Classical Scaling
> test_pipeop_isomap.R: 2026-03-03 22:52:43.600099: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-03 22:52:43.600548: constructing knn graph
> test_pipeop_isomap.R: 2026-03-03 22:52:43.676883: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-03 22:52:44.154829: embedding
> test_pipeop_isomap.R: 2026-03-03 22:52:44.933476: DONE
> test_pipeop_isomap.R: 2026-03-03 22:52:45.249569: Isomap START
> test_pipeop_isomap.R: 2026-03-03 22:52:45.249861: constructing knn graph
> test_pipeop_isomap.R: 2026-03-03 22:52:45.256584: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-03 22:52:45.3068: Classical Scaling
> test_pipeop_isomap.R: 2026-03-03 22:52:45.359071: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-03 22:52:45.370721: constructing knn graph
> test_pipeop_isomap.R: 2026-03-03 22:52:45.384852: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-03 22:52:45.49402: embedding
> test_pipeop_isomap.R: 2026-03-03 22:52:45.495141: DONE
> test_pipeop_isomap.R: 2026-03-03 22:52:45.77023: Isomap START
> test_pipeop_isomap.R: 2026-03-03 22:52:45.770511: constructing knn graph
> test_pipeop_isomap.R: 2026-03-03 22:52:45.793892: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-03 22:52:45.830847: Classical Scaling
> test_pipeop_isomap.R: 2026-03-03 22:52:45.939695: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-03 22:52:45.940127: constructing knn graph
> test_pipeop_isomap.R: 2026-03-03 22:52:45.965749: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-03 22:52:46.065651: embedding
> test_pipeop_isomap.R: 2026-03-03 22:52:46.066833: DONE
> test_pipeop_isomap.R: 2026-03-03 22:52:46.232907: Isomap START
> test_pipeop_isomap.R: 2026-03-03 22:52:46.233205: constructing knn graph
> test_pipeop_isomap.R: 2026-03-03 22:52:46.262065: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-03 22:52:46.312962: Classical Scaling
> test_pipeop_isomap.R: 2026-03-03 22:52:46.401503: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-03 22:52:46.402017: constructing knn graph
> test_pipeop_isomap.R: 2026-03-03 22:52:46.446889: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-03 22:52:46.552772: embedding
> test_pipeop_isomap.R: 2026-03-03 22:52:46.553947: DONE
> test_pipeop_isomap.R: 2026-03-03 22:52:46.700423: Isomap START
> test_pipeop_isomap.R: 2026-03-03 22:52:46.700745: constructing knn graph
> test_pipeop_isomap.R: 2026-03-03 22:52:46.740298: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-03 22:52:46.797329: Classical Scaling
> test_pipeop_isomap.R: 2026-03-03 22:52:46.922119: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-03 22:52:46.922613: constructing knn graph
> test_pipeop_isomap.R: 2026-03-03 22:52:47.005204: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-03 22:52:47.097346: embedding
> test_pipeop_isomap.R: 2026-03-03 22:52:47.098454: DONE
> test_pipeop_isomap.R: 2026-03-03 22:52:47.260345: Isomap START
> test_pipeop_isomap.R: 2026-03-03 22:52:47.260724: constructing knn graph
> test_pipeop_isomap.R: 2026-03-03 22:52:47.26755: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-03 22:52:47.308122: Classical Scaling
> test_pipeop_isomap.R: 2026-03-03 22:52:47.420446: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-03 22:52:47.420859: constructing knn graph
> test_pipeop_isomap.R: 2026-03-03 22:52:47.452808: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-03 22:52:47.553582: embedding
> test_pipeop_isomap.R: 2026-03-03 22:52:47.554693: DONE
> test_pipeop_isomap.R: 2026-03-03 22:52:47.711077: Isomap START
> test_pipeop_isomap.R: 2026-03-03 22:52:47.711371: constructing knn graph
> test_pipeop_isomap.R: 2026-03-03 22:52:47.734333: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-03 22:52:47.78625: Classical Scaling
> test_pipeop_isomap.R: 2026-03-03 22:52:47.923013: Isomap START
> test_pipeop_isomap.R: 2026-03-03 22:52:47.923291: constructing knn graph
> test_pipeop_isomap.R: 2026-03-03 22:52:47.955389: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-03 22:52:47.988952: Classical Scaling
> test_pipeop_isomap.R: 2026-03-03 22:52:48.040431: Isomap START
> test_pipeop_isomap.R: 2026-03-03 22:52:48.040735: constructing knn graph
> test_pipeop_isomap.R: 2026-03-03 22:52:48.067776: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-03 22:52:48.114596: Classical Scaling
Saving _problems/test_pipeop_nmf-45.R
Saving _problems/test_pipeop_nmf-73.R
Saving _problems/test_pipeop_nmf-93.R
Saving _problems/test_pipeop_nmf-98.R
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R:
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
[ FAIL 6 | WARN 0 | SKIP 128 | PASS 8754 ]
══ Skipped tests (128) ═════════════════════════════════════════════════════════
• On CRAN (125): 'test_CnfFormula_simplify.R:6:3', 'test_CnfFormula.R:591:3',
'test_Graph.R:283:3', 'test_PipeOp.R:32:1', 'test_GraphLearner.R:5:3',
'test_GraphLearner.R:221:3', 'test_GraphLearner.R:343:3',
'test_GraphLearner.R:408:3', 'test_GraphLearner.R:571:3',
'test_doublearrow.R:2:1', 'test_gunion.R:2:1',
'test_learner_weightedaverage.R:5:3', 'test_learner_weightedaverage.R:57:3',
'test_learner_weightedaverage.R:105:3',
'test_learner_weightedaverage.R:152:3', 'test_meta.R:39:3',
'test_dictionary.R:7:3', 'test_mlr_graphs_branching.R:26:3',
'test_mlr_graphs_bagging.R:6:3', 'test_mlr_graphs_robustify.R:5:3',
'test_pipeop_adas.R:8:3', 'test_pipeop_blsmote.R:8:3',
'test_pipeop_branch.R:4:3', 'test_pipeop_chunk.R:4:3',
'test_pipeop_classbalancing.R:7:3', 'test_pipeop_boxcox.R:7:3',
'test_pipeop_classweights.R:10:3', 'test_pipeop_classweightsex.R:9:3',
'test_pipeop_colapply.R:9:3', 'test_pipeop_collapsefactors.R:6:3',
'test_pipeop_copy.R:5:3', 'test_pipeop_colroles.R:6:3',
'test_pipeop_decode.R:14:3', 'test_pipeop_encode.R:21:3',
'test_pipeop_encodeimpact.R:11:3', 'test_pipeop_encodepl.R:5:3',
'test_pipeop_encodepl.R:72:3', 'test_pipeop_ensemble.R:3:1',
'test_pipeop_encodelmer.R:15:3', 'test_pipeop_encodelmer.R:37:3',
'test_pipeop_encodelmer.R:80:3', 'test_pipeop_filter.R:7:3',
'test_pipeop_fixfactors.R:9:3', 'test_pipeop_histbin.R:7:3',
'test_pipeop_ica.R:7:3', 'test_pipeop_featureunion.R:9:3',
'test_pipeop_featureunion.R:134:3', 'test_pipeop_impute.R:4:3',
'test_pipeop_info.R:3:1', 'test_pipeop_imputelearner.R:43:3',
'test_pipeop_kernelpca.R:9:3', 'test_pipeop_isomap.R:10:3',
'test_pipeop_learner.R:17:3', 'test_pipeop_learnerpicvplus.R:2:1',
'test_pipeop_missind.R:6:3', 'test_pipeop_modelmatrix.R:7:3',
'test_pipeop_multiplicityexply.R:9:3', 'test_pipeop_multiplicityimply.R:9:3',
'test_pipeop_mutate.R:9:3', 'test_pipeop_nearmiss.R:7:3',
'test_pipeop_learnercv.R:3:3', 'test_pipeop_learnercv.R:43:3',
'test_pipeop_learnercv.R:73:3', 'test_pipeop_learnercv.R:92:3',
'test_pipeop_learnercv.R:141:3', 'test_pipeop_learnercv.R:157:3',
'test_pipeop_learnercv.R:203:3', 'test_pipeop_learnercv.R:249:3',
'test_pipeop_learnercv.R:278:3', 'test_pipeop_learnercv.R:332:3',
'test_pipeop_learnercv.R:359:3', 'test_pipeop_learnercv.R:389:3',
'test_pipeop_learnercv.R:399:3', 'test_pipeop_learnercv.R:432:3',
'test_pipeop_learnercv.R:472:3', 'test_pipeop_learnercv.R:481:3',
'test_pipeop_learnercv.R:498:3', 'test_pipeop_learnercv.R:506:3',
'test_pipeop_learnercv.R:530:3', 'test_pipeop_learnercv.R:554:3',
'test_pipeop_learnercv.R:634:3', 'test_pipeop_learnercv.R:654:3',
'test_pipeop_learnercv.R:669:3', 'test_pipeop_learnercv.R:754:3',
'test_pipeop_learnercv.R:799:3', 'test_pipeop_learnercv.R:827:3',
'test_pipeop_ovr.R:9:3', 'test_pipeop_ovr.R:48:3', 'test_pipeop_pca.R:8:3',
'test_pipeop_proxy.R:2:1', 'test_pipeop_quantilebin.R:5:3',
'test_pipeop_randomprojection.R:6:3', 'test_pipeop_randomresponse.R:5:3',
'test_pipeop_removeconstants.R:6:3', 'test_pipeop_renamecolumns.R:6:3',
'test_pipeop_replicate.R:9:3', 'test_pipeop_nmf.R:6:3',
'test_pipeop_rowapply.R:6:3', 'test_pipeop_scale.R:6:3',
'test_pipeop_scale.R:10:3', 'test_pipeop_scalemaxabs.R:6:3',
'test_pipeop_scalerange.R:7:3', 'test_pipeop_select.R:9:3',
'test_pipeop_smote.R:10:3', 'test_pipeop_smotenc.R:8:3',
'test_pipeop_spatialsign.R:3:1', 'test_pipeop_splines.R:3:1',
'test_pipeop_targetinvert.R:4:3', 'test_pipeop_targetmutate.R:5:3',
'test_pipeop_targettrafo.R:4:3', 'test_pipeop_targettrafoscalerange.R:5:3',
'test_pipeop_task_preproc.R:4:3', 'test_pipeop_task_preproc.R:14:3',
'test_pipeop_subsample.R:6:3', 'test_pipeop_tomek.R:7:3',
'test_pipeop_textvectorizer.R:37:3', 'test_pipeop_textvectorizer.R:186:3',
'test_pipeop_unbranch.R:10:3', 'test_pipeop_updatetarget.R:89:3',
'test_pipeop_vtreat.R:9:3', 'test_pipeop_yeojohnson.R:7:3',
'test_ppl.R:63:3', 'test_pipeop_tunethreshold.R:111:3',
'test_pipeop_tunethreshold.R:191:3', 'test_typecheck.R:188:3'
• Skipping (1): 'test_GraphLearner.R:1278:3'
• empty test (2): 'test_pipeop_isomap.R:111:1', 'test_pipeop_missind.R:101:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_pipeop_datefeatures.R:7:3'): PipeOpDateFeatures - basic properties ──
Error in `seq.Date(as.Date("2020-01-31"), length.out = 150L)`: exactly two of 'to', 'by' and 'length.out' / 'along.with' must be specified
Backtrace:
▆
1. ├─base::seq(as.Date("2020-01-31"), length.out = 150L) at test_pipeop_datefeatures.R:7:3
2. └─base::seq.Date(as.Date("2020-01-31"), length.out = 150L)
── Error ('test_pipeop_datefeatures.R:17:3'): PipeOpDateFeatures - finds POSIXct column ──
Error in `seq.Date(as.Date("2020-01-31"), length.out = 150L)`: exactly two of 'to', 'by' and 'length.out' / 'along.with' must be specified
Backtrace:
▆
1. ├─base::seq(as.Date("2020-01-31"), length.out = 150L) at test_pipeop_datefeatures.R:17:3
2. └─base::seq.Date(as.Date("2020-01-31"), length.out = 150L)
── Error ('test_pipeop_nmf.R:45:3'): PipeOpNMF - does not modify search path when NMF is not loaded, fix for #929 ──
Error in `detach(package:generics)`: invalid 'name' argument
Backtrace:
▆
1. └─base::detach(package:generics) at test_pipeop_nmf.R:45:3
── Failure ('test_pipeop_nmf.R:73:3'): PipeOpNMF - does not modify search path when NMF is loaded, fix for #929 ──
Expected `all(...)` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Failure ('test_pipeop_nmf.R:93:3'): PipeOpNMF - does not modify search path when some of NMF's dependencies are loaded, fix for #929 ──
Expected `all(paste0("package:", c("BiocGenerics", "generics")) %in% search())` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Error ('test_pipeop_nmf.R:98:3'): PipeOpNMF - does not modify search path when some of NMF's dependencies are loaded, fix for #929 ──
Error in `FUN(X[[i]], ...)`: invalid 'name' argument
This happened in PipeOp nmf's $train()
Backtrace:
▆
1. ├─op$train(list(tsk("iris"))) at test_pipeop_nmf.R:98:3
2. │ └─mlr3pipelines:::.__PipeOp__train(...)
3. │ ├─base::withCallingHandlers(...)
4. │ └─private$.train(input)
5. │ └─mlr3pipelines:::.__PipeOpTaskPreproc__.train(...)
6. │ └─private$.train_task(intask)
7. │ └─mlr3pipelines:::.__PipeOpTaskPreproc__.train_task(...)
8. │ ├─data.table::as.data.table(...)
9. │ └─private$.train_dt(dt, task$levels(cols), task$truth())
10. │ └─mlr3pipelines:::.__PipeOpNMF__.train_dt(...)
11. │ └─mlr3misc::map(to_be_detached, detach, character.only = TRUE)
12. │ └─base::lapply(.x, .f, ...)
13. │ └─base (local) FUN(X[[i]], ...)
14. │ └─base::stop("invalid 'name' argument")
15. └─base::.handleSimpleError(...)
16. └─mlr3pipelines (local) h(simpleError(msg, call))
[ FAIL 6 | WARN 0 | SKIP 128 | PASS 8754 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64
Version: 0.11.0
Check: tests
Result: ERROR
Running 'testthat.R' [241s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> if (requireNamespace("testthat", quietly = TRUE)) {
+ library("checkmate")
+ library("testthat")
+ library("mlr3")
+ library("paradox")
+ library("mlr3pipelines")
+ test_check("mlr3pipelines")
+ }
Starting 2 test processes.
> test_Graph.R: Training debug.multi with input list(input_1 = 1, input_2 = 1)
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_multiplicities.R:
> test_multiplicities.R:
> test_multiplicities.R: [[1]]
> test_multiplicities.R: [1] 0
> test_multiplicities.R:
> test_pipeop_blsmote.R: [1] "Borderline-SMOTE done"
> test_pipeop_blsmote.R: [1] "Borderline-SMOTE done"
> test_pipeop_blsmote.R: [1] "Borderline-SMOTE done"
> test_pipeop_blsmote.R: [1] "Borderline-SMOTE done"
Saving _problems/test_pipeop_datefeatures-7.R
Saving _problems/test_pipeop_datefeatures-17.R
> test_pipeop_isomap.R: 2026-03-02 22:04:20.449788: Isomap START
> test_pipeop_isomap.R: 2026-03-02 22:04:20.450847: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:20.464997: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:20.484803: Classical Scaling
> test_pipeop_isomap.R: 2026-03-02 22:04:20.557764: Isomap START
> test_pipeop_isomap.R: 2026-03-02 22:04:20.55837: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:20.569669: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:20.590593: Classical Scaling
> test_pipeop_isomap.R: 2026-03-02 22:04:20.633154: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-02 22:04:20.634032: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:20.656897: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:20.707449: embedding
> test_pipeop_isomap.R: 2026-03-02 22:04:20.709322: DONE
> test_pipeop_isomap.R: 2026-03-02 22:04:20.754579: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-02 22:04:20.755272: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:20.780099: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:20.829966: embedding
> test_pipeop_isomap.R: 2026-03-02 22:04:20.831761: DONE
> test_pipeop_isomap.R: 2026-03-02 22:04:21.064053: Isomap START
> test_pipeop_isomap.R: 2026-03-02 22:04:21.064825: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:21.085713: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:21.175293: Classical Scaling
> test_pipeop_isomap.R: 2026-03-02 22:04:21.222275: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-02 22:04:21.223041: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:21.253627: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:21.486371: embedding
> test_pipeop_isomap.R: 2026-03-02 22:04:21.491754: DONE
> test_pipeop_isomap.R: 2026-03-02 22:04:21.700167: Isomap START
> test_pipeop_isomap.R: 2026-03-02 22:04:21.700814: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:21.711808: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:21.733867: Classical Scaling
> test_pipeop_isomap.R: 2026-03-02 22:04:21.775788: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-02 22:04:21.776427: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:21.80638: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:21.845498: embedding
> test_pipeop_isomap.R: 2026-03-02 22:04:21.846663: DONE
> test_pipeop_isomap.R: 2026-03-02 22:04:22.066367: Isomap START
> test_pipeop_isomap.R: 2026-03-02 22:04:22.066981: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:22.078695: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:22.099919: Classical Scaling
> test_pipeop_isomap.R: 2026-03-02 22:04:22.175231: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-02 22:04:22.176342: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:22.202178: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:22.252915: embedding
> test_pipeop_isomap.R: 2026-03-02 22:04:22.255088: DONE
> test_pipeop_isomap.R: 2026-03-02 22:04:22.378555: Isomap START
> test_pipeop_isomap.R: 2026-03-02 22:04:22.37924: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:22.392285: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:22.408871: Classical Scaling
> test_pipeop_isomap.R: 2026-03-02 22:04:22.458515: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-02 22:04:22.459178: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:22.474797: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:22.511226: embedding
> test_pipeop_isomap.R: 2026-03-02 22:04:22.51262: DONE
> test_pipeop_isomap.R: 2026-03-02 22:04:22.647087: Isomap START
> test_pipeop_isomap.R: 2026-03-02 22:04:22.647817: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:22.660507: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:22.680541: Classical Scaling
> test_pipeop_isomap.R: 2026-03-02 22:04:22.756917: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-02 22:04:22.757844: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:22.780308: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:22.829057: embedding
> test_pipeop_isomap.R: 2026-03-02 22:04:22.83088: DONE
> test_pipeop_isomap.R: 2026-03-02 22:04:22.958029: Isomap START
> test_pipeop_isomap.R: 2026-03-02 22:04:22.958741: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:22.97172: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:22.993241: Classical Scaling
> test_pipeop_isomap.R: 2026-03-02 22:04:23.066977: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-02 22:04:23.067878: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:23.090404: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:23.137942: embedding
> test_pipeop_isomap.R: 2026-03-02 22:04:23.139504: DONE
> test_pipeop_isomap.R: 2026-03-02 22:04:23.26562: Isomap START
> test_pipeop_isomap.R: 2026-03-02 22:04:23.266068: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:23.273442: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:23.288412: Classical Scaling
> test_pipeop_isomap.R: 2026-03-02 22:04:23.378645: Isomap START
> test_pipeop_isomap.R: 2026-03-02 22:04:23.379301: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:23.389784: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:23.411627: Classical Scaling
> test_pipeop_isomap.R: 2026-03-02 22:04:23.471079: Isomap START
> test_pipeop_isomap.R: 2026-03-02 22:04:23.471783: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:23.48269: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:23.504897: Classical Scaling
Saving _problems/test_pipeop_nmf-45.R
Saving _problems/test_pipeop_nmf-73.R
Saving _problems/test_pipeop_nmf-93.R
Saving _problems/test_pipeop_nmf-98.R
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
[ FAIL 6 | WARN 0 | SKIP 128 | PASS 8754 ]
══ Skipped tests (128) ═════════════════════════════════════════════════════════
• On CRAN (125): 'test_CnfFormula_simplify.R:6:3', 'test_CnfFormula.R:591:3',
'test_Graph.R:283:3', 'test_PipeOp.R:32:1', 'test_GraphLearner.R:5:3',
'test_GraphLearner.R:221:3', 'test_GraphLearner.R:343:3',
'test_GraphLearner.R:408:3', 'test_GraphLearner.R:571:3',
'test_doublearrow.R:2:1', 'test_gunion.R:2:1',
'test_learner_weightedaverage.R:5:3', 'test_learner_weightedaverage.R:57:3',
'test_learner_weightedaverage.R:105:3',
'test_learner_weightedaverage.R:152:3', 'test_meta.R:39:3',
'test_dictionary.R:7:3', 'test_mlr_graphs_branching.R:26:3',
'test_mlr_graphs_bagging.R:6:3', 'test_mlr_graphs_robustify.R:5:3',
'test_pipeop_adas.R:8:3', 'test_pipeop_blsmote.R:8:3',
'test_pipeop_branch.R:4:3', 'test_pipeop_chunk.R:4:3',
'test_pipeop_classbalancing.R:7:3', 'test_pipeop_boxcox.R:7:3',
'test_pipeop_classweights.R:10:3', 'test_pipeop_classweightsex.R:9:3',
'test_pipeop_collapsefactors.R:6:3', 'test_pipeop_colapply.R:9:3',
'test_pipeop_copy.R:5:3', 'test_pipeop_colroles.R:6:3',
'test_pipeop_decode.R:14:3', 'test_pipeop_encode.R:21:3',
'test_pipeop_encodeimpact.R:11:3', 'test_pipeop_encodepl.R:5:3',
'test_pipeop_encodepl.R:72:3', 'test_pipeop_ensemble.R:3:1',
'test_pipeop_encodelmer.R:15:3', 'test_pipeop_encodelmer.R:37:3',
'test_pipeop_encodelmer.R:80:3', 'test_pipeop_filter.R:7:3',
'test_pipeop_fixfactors.R:9:3', 'test_pipeop_histbin.R:7:3',
'test_pipeop_ica.R:7:3', 'test_pipeop_featureunion.R:9:3',
'test_pipeop_featureunion.R:134:3', 'test_pipeop_imputelearner.R:43:3',
'test_pipeop_info.R:3:1', 'test_pipeop_impute.R:4:3',
'test_pipeop_kernelpca.R:9:3', 'test_pipeop_isomap.R:10:3',
'test_pipeop_learner.R:17:3', 'test_pipeop_learnerpicvplus.R:2:1',
'test_pipeop_learnercv.R:3:3', 'test_pipeop_learnercv.R:43:3',
'test_pipeop_learnercv.R:73:3', 'test_pipeop_learnercv.R:92:3',
'test_pipeop_learnercv.R:141:3', 'test_pipeop_learnercv.R:157:3',
'test_pipeop_learnercv.R:203:3', 'test_pipeop_learnercv.R:249:3',
'test_pipeop_learnercv.R:278:3', 'test_pipeop_learnercv.R:332:3',
'test_pipeop_learnercv.R:359:3', 'test_pipeop_learnercv.R:389:3',
'test_pipeop_learnercv.R:399:3', 'test_pipeop_learnercv.R:432:3',
'test_pipeop_learnercv.R:472:3', 'test_pipeop_learnercv.R:481:3',
'test_pipeop_learnercv.R:498:3', 'test_pipeop_learnercv.R:506:3',
'test_pipeop_learnercv.R:530:3', 'test_pipeop_learnercv.R:554:3',
'test_pipeop_learnercv.R:634:3', 'test_pipeop_learnercv.R:654:3',
'test_pipeop_learnercv.R:669:3', 'test_pipeop_learnercv.R:754:3',
'test_pipeop_learnercv.R:799:3', 'test_pipeop_learnercv.R:827:3',
'test_pipeop_modelmatrix.R:7:3', 'test_pipeop_missind.R:6:3',
'test_pipeop_multiplicityexply.R:9:3', 'test_pipeop_mutate.R:9:3',
'test_pipeop_nearmiss.R:7:3', 'test_pipeop_multiplicityimply.R:9:3',
'test_pipeop_ovr.R:9:3', 'test_pipeop_ovr.R:48:3', 'test_pipeop_pca.R:8:3',
'test_pipeop_proxy.R:2:1', 'test_pipeop_quantilebin.R:5:3',
'test_pipeop_randomprojection.R:6:3', 'test_pipeop_randomresponse.R:5:3',
'test_pipeop_removeconstants.R:6:3', 'test_pipeop_renamecolumns.R:6:3',
'test_pipeop_replicate.R:9:3', 'test_pipeop_rowapply.R:6:3',
'test_pipeop_scale.R:6:3', 'test_pipeop_scale.R:10:3',
'test_pipeop_scalemaxabs.R:6:3', 'test_pipeop_scalerange.R:7:3',
'test_pipeop_select.R:9:3', 'test_pipeop_smote.R:10:3',
'test_pipeop_smotenc.R:8:3', 'test_pipeop_spatialsign.R:3:1',
'test_pipeop_splines.R:3:1', 'test_pipeop_nmf.R:6:3',
'test_pipeop_targetinvert.R:4:3', 'test_pipeop_targetmutate.R:5:3',
'test_pipeop_targettrafo.R:4:3', 'test_pipeop_subsample.R:6:3',
'test_pipeop_targettrafoscalerange.R:5:3', 'test_pipeop_task_preproc.R:4:3',
'test_pipeop_task_preproc.R:14:3', 'test_pipeop_tomek.R:7:3',
'test_pipeop_textvectorizer.R:37:3', 'test_pipeop_textvectorizer.R:186:3',
'test_pipeop_unbranch.R:10:3', 'test_pipeop_updatetarget.R:89:3',
'test_pipeop_vtreat.R:9:3', 'test_pipeop_yeojohnson.R:7:3',
'test_ppl.R:63:3', 'test_pipeop_tunethreshold.R:111:3',
'test_pipeop_tunethreshold.R:191:3', 'test_typecheck.R:188:3'
• Skipping (1): 'test_GraphLearner.R:1278:3'
• empty test (2): 'test_pipeop_isomap.R:111:1', 'test_pipeop_missind.R:101:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_pipeop_datefeatures.R:7:3'): PipeOpDateFeatures - basic properties ──
Error in `seq.Date(as.Date("2020-01-31"), length.out = 150L)`: exactly two of 'to', 'by' and 'length.out' / 'along.with' must be specified
Backtrace:
▆
1. ├─base::seq(as.Date("2020-01-31"), length.out = 150L) at test_pipeop_datefeatures.R:7:3
2. └─base::seq.Date(as.Date("2020-01-31"), length.out = 150L)
── Error ('test_pipeop_datefeatures.R:17:3'): PipeOpDateFeatures - finds POSIXct column ──
Error in `seq.Date(as.Date("2020-01-31"), length.out = 150L)`: exactly two of 'to', 'by' and 'length.out' / 'along.with' must be specified
Backtrace:
▆
1. ├─base::seq(as.Date("2020-01-31"), length.out = 150L) at test_pipeop_datefeatures.R:17:3
2. └─base::seq.Date(as.Date("2020-01-31"), length.out = 150L)
── Error ('test_pipeop_nmf.R:45:3'): PipeOpNMF - does not modify search path when NMF is not loaded, fix for #929 ──
Error in `detach(package:generics)`: invalid 'name' argument
Backtrace:
▆
1. └─base::detach(package:generics) at test_pipeop_nmf.R:45:3
── Failure ('test_pipeop_nmf.R:73:3'): PipeOpNMF - does not modify search path when NMF is loaded, fix for #929 ──
Expected `all(...)` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Failure ('test_pipeop_nmf.R:93:3'): PipeOpNMF - does not modify search path when some of NMF's dependencies are loaded, fix for #929 ──
Expected `all(paste0("package:", c("BiocGenerics", "generics")) %in% search())` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Error ('test_pipeop_nmf.R:98:3'): PipeOpNMF - does not modify search path when some of NMF's dependencies are loaded, fix for #929 ──
Error in `FUN(X[[i]], ...)`: invalid 'name' argument
This happened in PipeOp nmf's $train()
Backtrace:
▆
1. ├─op$train(list(tsk("iris"))) at test_pipeop_nmf.R:98:3
2. │ └─mlr3pipelines:::.__PipeOp__train(...)
3. │ ├─base::withCallingHandlers(...)
4. │ └─private$.train(input)
5. │ └─mlr3pipelines:::.__PipeOpTaskPreproc__.train(...)
6. │ └─private$.train_task(intask)
7. │ └─mlr3pipelines:::.__PipeOpTaskPreproc__.train_task(...)
8. │ ├─data.table::as.data.table(...)
9. │ └─private$.train_dt(dt, task$levels(cols), task$truth())
10. │ └─mlr3pipelines:::.__PipeOpNMF__.train_dt(...)
11. │ └─mlr3misc::map(to_be_detached, detach, character.only = TRUE)
12. │ └─base::lapply(.x, .f, ...)
13. │ └─base (local) FUN(X[[i]], ...)
14. │ └─base::stop("invalid 'name' argument")
15. └─base::.handleSimpleError(...)
16. └─mlr3pipelines (local) h(simpleError(msg, call))
[ FAIL 6 | WARN 0 | SKIP 128 | PASS 8754 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-windows-x86_64