Last updated on 2025-03-26 05:54:11 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 22.09 | 1968.69 | 1990.78 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 16.90 | 3988.78 | 4005.68 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 2461.01 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 1825.28 | ERROR | |||
| r-devel-macos-arm64 | 1.1.4 | 68.00 | OK | |||
| r-devel-macos-x86_64 | 1.1.4 | 271.00 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 24.00 | 1494.00 | 1518.00 | ERROR | |
| r-patched-linux-x86_64 | 1.1.4 | 20.06 | 1910.02 | 1930.08 | ERROR | |
| r-release-linux-x86_64 | 1.1.4 | 21.87 | 1824.82 | 1846.69 | ERROR | |
| r-release-macos-arm64 | 1.1.4 | 65.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 96.00 | OK | |||
| r-release-windows-x86_64 | 1.1.4 | 23.00 | 1448.00 | 1471.00 | ERROR | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 164.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 32.00 | 0.00 | 32.00 | FAIL |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [30m/44m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(proteus)
>
> test_check("proteus")
block 1
581 sequence for training
561 sequence for testing
epoch: 3 Train loss: 0.321114 Test loss: 0.3321306
epoch: 6 Train loss: 0.3306861 Test loss: 0.3336446
epoch: 9 Train loss: 0.3333218 Test loss: 0.3363992
epoch: 12 Train loss: 0.3340265 Test loss: 0.3319455
epoch: 15 Train loss: 0.336142 Test loss: 0.3359197
epoch: 18 Train loss: 0.3258315 Test loss: 0.3313888
epoch: 21 Train loss: 0.3348502 Test loss: 0.3276891
early stop at epoch: 23 Train loss: 0.3616689 Test loss: 0.3277148
block 2
1142 sequence for training
561 sequence for testing
epoch: 3 Train loss: 0.3353842 Test loss: 0.3322885
epoch: 6 Train loss: 0.3286981 Test loss: 0.3343798
epoch: 9 Train loss: 0.327653 Test loss: 0.3284388
epoch: 12 Train loss: 0.3411809 Test loss: 0.3347841
early stop at epoch: 13 Train loss: 0.2344178 Test loss: 0.3178131
final training on all 3
1703 sequence for training
epoch: 3 Train loss: 0.33419
epoch: 6 Train loss: 0.3344037
epoch: 9 Train loss: 0.3277188
epoch: 12 Train loss: 0.3307849
epoch: 15 Train loss: 0.3321109
epoch: 18 Train loss: 0.3288007
epoch: 21 Train loss: 0.3293982
epoch: 24 Train loss: 0.3310115
epoch: 27 Train loss: 0.3331793
epoch: 30 Train loss: 0.3361465
variational model based on normal latent distribution with 144 tensors and 8190 parameters
proteus: 921.299 sec elapsed
date and value gaps filled with kalman imputation
block 1
801 sequence for training
801 sequence for testing
epoch: 3 Train loss: 0.3242047 Test loss: 0.3271196
epoch: 6 Train loss: 0.3276102 Test loss: 0.328527
epoch: 9 Train loss: 0.3234263 Test loss: 0.3274919
early stop at epoch: 10 Train loss: 0.3351796 Test loss: 0.3220558
block 2
1602 sequence for training
801 sequence for testing
epoch: 3 Train loss: 0.3204344 Test loss: 0.3281769
epoch: 6 Train loss: 0.3204992 Test loss: 0.3289552
epoch: 9 Train loss: 0.3230156 Test loss: 0.3299439
epoch: 12 Train loss: 0.3213036 Test loss: 0.3273793
early stop at epoch: 14 Train loss: 0.3171595 Test loss: 0.3329267
final training on all 3
2403 sequence for training
epoch: 3 Train loss: 0.3306837
epoch: 6 Train loss: 0.3286098
epoch: 9 Train loss: 0.3302987
epoch: 12 Train loss: 0.3308404
epoch: 15 Train loss: 0.3316363
epoch: 18 Train loss: 0.3305579
epoch: 21 Train loss: 0.3296561
epoch: 24 Train loss: 0.3288558
epoch: 27 Train loss: 0.3285954
epoch: 30 Train loss: 0.3292858
variational model based on normal latent distribution with 144 tensors and 60670 parameters
proteus: 1724.226 sec elapsed
[ FAIL 1 | WARN 13747 | SKIP 0 | PASS 24 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-main.R:44:13'): Correct outcome format and size for base outcome3 ──
Error: 'workers >= 1' is not TRUE
Backtrace:
▆
1. └─proteus::proteus_random_search(...) at test-main.R:44:13
2. └─future::plan(...)
3. └─future (local) plan_set(newStack, skip = .skip, cleanup = .cleanup, init = .init)
4. └─future (local) plan_init()
5. └─future (local) evaluator(NA, label = "future-plan-test", globals = FALSE, lazy = FALSE)
6. └─future (local) strategy(..., workers = workers, envir = envir)
7. └─future:::stop_if_not(...)
8. └─future:::stopf(...)
[ FAIL 1 | WARN 13747 | SKIP 0 | PASS 24 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [65m/55m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(proteus)
>
> test_check("proteus")
block 1
581 sequence for training
561 sequence for testing
epoch: 3 Train loss: 0.3190348 Test loss: 0.3286328
epoch: 6 Train loss: 0.3273224 Test loss: 0.3310913
epoch: 9 Train loss: 0.3305737 Test loss: 0.3359217
epoch: 12 Train loss: 0.3325046 Test loss: 0.3303941
epoch: 15 Train loss: 0.3334097 Test loss: 0.3328705
epoch: 18 Train loss: 0.3232155 Test loss: 0.3307394
epoch: 21 Train loss: 0.3329299 Test loss: 0.324207
early stop at epoch: 23 Train loss: 0.3616706 Test loss: 0.327345
block 2
1142 sequence for training
561 sequence for testing
epoch: 3 Train loss: 0.3357101 Test loss: 0.3327065
epoch: 6 Train loss: 0.3291909 Test loss: 0.3327941
epoch: 9 Train loss: 0.3284706 Test loss: 0.328068
epoch: 12 Train loss: 0.3418736 Test loss: 0.3348176
early stop at epoch: 13 Train loss: 0.2780534 Test loss: 0.3178275
final training on all 3
1703 sequence for training
epoch: 3 Train loss: 0.3341904
epoch: 6 Train loss: 0.3344039
epoch: 9 Train loss: 0.3277193
epoch: 12 Train loss: 0.330785
epoch: 15 Train loss: 0.332111
epoch: 18 Train loss: 0.3288006
epoch: 21 Train loss: 0.3293977
epoch: 24 Train loss: 0.3310112
epoch: 27 Train loss: 0.3331797
epoch: 30 Train loss: 0.3361475
variational model based on normal latent distribution with 144 tensors and 8190 parameters
proteus: 1039.559 sec elapsed
date and value gaps filled with kalman imputation
block 1
801 sequence for training
801 sequence for testing
epoch: 3 Train loss: 0.324479 Test loss: 0.3280755
epoch: 6 Train loss: 0.3263002 Test loss: 0.3274768
epoch: 9 Train loss: 0.3238882 Test loss: 0.3270843
early stop at epoch: 10 Train loss: 0.3356368 Test loss: 0.3227979
block 2
1602 sequence for training
801 sequence for testing
epoch: 3 Train loss: 0.3239276 Test loss: 0.3290827
epoch: 6 Train loss: 0.3236929 Test loss: 0.3303105
epoch: 9 Train loss: 0.3260993 Test loss: 0.3312863
epoch: 12 Train loss: 0.3255758 Test loss: 0.3289068
early stop at epoch: 14 Train loss: 0.3219504 Test loss: 0.32943
final training on all 3
2403 sequence for training
epoch: 3 Train loss: 0.3306837
epoch: 6 Train loss: 0.32861
epoch: 9 Train loss: 0.3302987
epoch: 12 Train loss: 0.3308404
epoch: 15 Train loss: 0.3316363
epoch: 18 Train loss: 0.3305584
epoch: 21 Train loss: 0.3296561
epoch: 24 Train loss: 0.3288558
epoch: 27 Train loss: 0.3285954
epoch: 30 Train loss: 0.3292858
variational model based on normal latent distribution with 144 tensors and 60670 parameters
proteus: 2250.348 sec elapsed
[ FAIL 1 | WARN 13747 | SKIP 0 | PASS 24 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-main.R:44:13'): Correct outcome format and size for base outcome3 ──
Error: 'workers >= 1' is not TRUE
Backtrace:
▆
1. └─proteus::proteus_random_search(...) at test-main.R:44:13
2. └─future::plan(...)
3. └─future (local) plan_set(newStack, skip = .skip, cleanup = .cleanup, init = .init)
4. └─future (local) plan_init()
5. └─future (local) evaluator(NA, label = "future-plan-test", globals = FALSE, lazy = FALSE)
6. └─future (local) strategy(..., workers = workers, envir = envir)
7. └─future:::stop_if_not(...)
8. └─future:::stopf(...)
[ FAIL 1 | WARN 13747 | SKIP 0 | PASS 24 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [36m/90m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(proteus)
>
> test_check("proteus")
block 1
581 sequence for training
561 sequence for testing
epoch: 3 Train loss: 0.3155343 Test loss: 0.3273139
epoch: 6 Train loss: 0.3249268 Test loss: 0.3296802
epoch: 9 Train loss: 0.3270825 Test loss: 0.3330758
epoch: 12 Train loss: 0.3275744 Test loss: 0.3279538
epoch: 15 Train loss: 0.3294025 Test loss: 0.3303694
epoch: 18 Train loss: 0.3197001 Test loss: 0.3285398
epoch: 21 Train loss: 0.3295622 Test loss: 0.3234937
early stop at epoch: 23 Train loss: 0.3616711 Test loss: 0.3289381
block 2
1142 sequence for training
561 sequence for testing
epoch: 3 Train loss: 0.335314 Test loss: 0.3328599
epoch: 6 Train loss: 0.3273172 Test loss: 0.3335104
epoch: 9 Train loss: 0.3289269 Test loss: 0.3270852
epoch: 12 Train loss: 0.3415635 Test loss: 0.3349884
early stop at epoch: 12 Train loss: 0.4641147 Test loss: 0.3343989
final training on all 3
1703 sequence for training
epoch: 3 Train loss: 0.3341897
epoch: 6 Train loss: 0.3344023
epoch: 9 Train loss: 0.327718
epoch: 12 Train loss: 0.3308248
epoch: 15 Train loss: 0.332109
epoch: 18 Train loss: 0.3288006
epoch: 21 Train loss: 0.329397
epoch: 24 Train loss: 0.3310126
epoch: 27 Train loss: 0.3331795
epoch: 30 Train loss: 0.3361463
variational model based on normal latent distribution with 144 tensors and 8190 parameters
proteus: 3113.183 sec elapsed
date and value gaps filled with kalman imputation
block 1
801 sequence for training
801 sequence for testing
epoch: 3 Train loss: 0.3222536 Test loss: 0.3279374
epoch: 6 Train loss: 0.3249767 Test loss: 0.3263984
epoch: 9 Train loss: 0.3227536 Test loss: 0.3253718
epoch: 12 Train loss: 0.3231193 Test loss: 0.3276188
epoch: 15 Train loss: 0.3222407 Test loss: 0.3248769
epoch: 18 Train loss: 0.3246608 Test loss: 0.329062
epoch: 21 Train loss: 0.323963 Test loss: 0.3269404
epoch: 24 Train loss: 0.3244791 Test loss: 0.327732
epoch: 27 Train loss: 0.3215661 Test loss: 0.3278306
epoch: 30 Train loss: 0.3260197 Test loss: 0.3256681
block 2
1602 sequence for training
801 sequence for testing
epoch: 3 Train loss: 0.3286132 Test loss: 0.3310416
epoch: 6 Train loss: 0.3273862 Test loss: 0.33203
epoch: 9 Train loss: 0.3300706 Test loss: 0.3325945
epoch: 12 Train loss: 0.3294034 Test loss: 0.3305967
early stop at epoch: 14 Train loss: 0.3333334 Test loss: 0.3323325
final training on all 3
2403 sequence for training
epoch: 3 Train loss: 0.3306832
epoch: 6 Train loss: 0.3286034
epoch: 9 Train loss: 0.3302916
epoch: 12 Train loss: 0.3308355
epoch: 15 Train loss: 0.3316461
epoch: 18 Train loss: 0.3305568
epoch: 21 Train loss: 0.3296519
epoch: 24 Train loss: 0.3288555
epoch: 27 Train loss: 0.3285875
epoch: 30 Train loss: 0.3292778
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [26m/90m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(proteus)
>
> test_check("proteus")
block 1
581 sequence for training
561 sequence for testing
epoch: 3 Train loss: 0.3206707 Test loss: 0.3296884
epoch: 6 Train loss: 0.3288247 Test loss: 0.3320897
epoch: 9 Train loss: 0.3315601 Test loss: 0.3364279
epoch: 12 Train loss: 0.3311084 Test loss: 0.332022
epoch: 15 Train loss: 0.3351621 Test loss: 0.3347324
epoch: 18 Train loss: 0.3259207 Test loss: 0.3319704
epoch: 21 Train loss: 0.3335764 Test loss: 0.3260679
early stop at epoch: 23 Train loss: 0.3616706 Test loss: 0.3313395
block 2
1142 sequence for training
561 sequence for testing
epoch: 3 Train loss: 0.3367957 Test loss: 0.3333176
epoch: 6 Train loss: 0.3291334 Test loss: 0.334082
epoch: 9 Train loss: 0.3298635 Test loss: 0.3278562
epoch: 12 Train loss: 0.3421411 Test loss: 0.3356785
early stop at epoch: 12 Train loss: 0.4641147 Test loss: 0.3343999
final training on all 3
1703 sequence for training
epoch: 3 Train loss: 0.3341897
epoch: 6 Train loss: 0.3344023
epoch: 9 Train loss: 0.327718
epoch: 12 Train loss: 0.3308248
epoch: 15 Train loss: 0.332109
epoch: 18 Train loss: 0.3288006
epoch: 21 Train loss: 0.329397
epoch: 24 Train loss: 0.3310126
epoch: 27 Train loss: 0.3331795
epoch: 30 Train loss: 0.3361463
variational model based on normal latent distribution with 144 tensors and 8190 parameters
proteus: 2705.942 sec elapsed
date and value gaps filled with kalman imputation
block 1
801 sequence for training
801 sequence for testing
epoch: 3 Train loss: 0.3265904 Test loss: 0.3292269
epoch: 6 Train loss: 0.3287946 Test loss: 0.3295834
epoch: 9 Train loss: 0.3258467 Test loss: 0.328494
epoch: 12 Train loss: 0.3271924 Test loss: 0.3296516
epoch: 15 Train loss: 0.3261889 Test loss: 0.3258883
epoch: 18 Train loss: 0.3271789 Test loss: 0.3308201
early stop at epoch: 18 Train loss: 0.3396003 Test loss: 0.3139121
block 2
1602 sequence for training
801 sequence for testing
epoch: 3 Train loss: 0.3275872 Test loss: 0.3308325
epoch: 6 Train loss: 0.3279003 Test loss: 0.3316956
epoch: 9 Train loss: 0.329465 Test loss: 0.3326774
epoch: 12 Train loss: 0.3284408 Test loss: 0.3300541
early stop at epoch: 14 Train loss: 0.3241241 Test loss: 0.3343912
final training on all 3
2403 sequence for training
epoch: 3 Train loss: 0.3306832
epoch: 6 Train loss: 0.3286034
epoch: 9 Train loss: 0.3302916
epoch: 12 Train loss: 0.3308355
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 1.1.4
Check: tests
Result: ERROR
Running 'testthat.R' [22m]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(proteus)
>
> test_check("proteus")
OMP: Warning #96: Cannot form a team with 48 threads, using 2 instead.
OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set).
OMP: Warning #96: Cannot form a team with 48 threads, using 2 instead.
OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set).
block 1
581 sequence for training
561 sequence for testing
epoch: 3 Train loss: 0.322175 Test loss: 0.3322556
epoch: 6 Train loss: 0.3308847 Test loss: 0.3329398
epoch: 9 Train loss: 0.3328113 Test loss: 0.3365498
epoch: 12 Train loss: 0.3345147 Test loss: 0.3328068
epoch: 15 Train loss: 0.3366133 Test loss: 0.3341542
early stop at epoch: 17 Train loss: 0.3605638 Test loss: 0.3450647
block 2
1142 sequence for training
561 sequence for testing
epoch: 3 Train loss: 0.3373711 Test loss: 0.3329315
epoch: 6 Train loss: 0.3293589 Test loss: 0.3341582
epoch: 9 Train loss: 0.3282632 Test loss: 0.3284243
epoch: 12 Train loss: 0.3425101 Test loss: 0.3350737
early stop at epoch: 12 Train loss: 0.4737266 Test loss: 0.3343123
final training on all 3
1703 sequence for training
OMP: Warning #96: Cannot form a team with 48 threads, using 2 instead.
OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set).
epoch: 3 Train loss: 0.3341906
epoch: 6 Train loss: 0.3344024
epoch: 9 Train loss: 0.3277184
epoch: 12 Train loss: 0.330829
epoch: 15 Train loss: 0.3321107
epoch: 18 Train loss: 0.3288029
epoch: 21 Train loss: 0.3293988
epoch: 24 Train loss: 0.3310117
epoch: 27 Train loss: 0.3331798
epoch: 30 Train loss: 0.3361483
variational model based on normal latent distribution with 144 tensors and 8190 parameters
proteus: 465.93 sec elapsed
date and value gaps filled with kalman imputation
OMP: Warning #96: Cannot form a team with 48 threads, using 2 instead.
OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set).
OMP: Warning #96: Cannot form a team with 48 threads, using 2 instead.
OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set).
block 1
801 sequence for training
801 sequence for testing
epoch: 3 Train loss: 0.330988 Test loss: 0.3324949
epoch: 6 Train loss: 0.3327442 Test loss: 0.3312143
epoch: 9 Train loss: 0.3289039 Test loss: 0.3299349
early stop at epoch: 10 Train loss: 0.3375555 Test loss: 0.3220914
block 2
1602 sequence for training
801 sequence for testing
epoch: 3 Train loss: 0.3266177 Test loss: 0.3302732
epoch: 6 Train loss: 0.3263917 Test loss: 0.3314447
epoch: 9 Train loss: 0.3288596 Test loss: 0.3328418
epoch: 12 Train loss: 0.3283222 Test loss: 0.329931
early stop at epoch: 14 Train loss: 0.323087 Test loss: 0.3293343
final training on all 3
2403 sequence for training
epoch: 3 Train loss: 0.3306856
epoch: 6 Train loss: 0.3286107
epoch: 9 Train loss: 0.3302989
epoch: 12 Train loss: 0.3308403
epoch: 15 Train loss: 0.3316448
epoch: 18 Train loss: 0.3305569
epoch: 21 Train loss: 0.3296555
epoch: 24 Train loss: 0.3288527
epoch: 27 Train loss: 0.3285952
epoch: 30 Train loss: 0.3292743
variational model based on normal latent distribution with 144 tensors and 60670 parameters
proteus: 861.89 sec elapsed
[ FAIL 1 | WARN 13747 | SKIP 0 | PASS 24 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-main.R:44:13'): Correct outcome format and size for base outcome3 ──
Error: 'workers >= 1' is not TRUE
Backtrace:
▆
1. └─proteus::proteus_random_search(...) at test-main.R:44:13
2. └─future::plan(...)
3. └─future (local) plan_set(newStack, skip = .skip, cleanup = .cleanup, init = .init)
4. └─future (local) plan_init()
5. └─future (local) evaluator(NA, label = "future-plan-test", globals = FALSE, lazy = FALSE)
6. └─future (local) strategy(..., workers = workers, envir = envir)
7. └─future:::stop_if_not(...)
8. └─future:::stopf(...)
[ FAIL 1 | WARN 13747 | SKIP 0 | PASS 24 ]
Error: Test failures
In addition: Warning messages:
1: In for (i in seq_len(nrow(theme))) { :
closing unused connection 6 (<-CRANwin3.fb05.statistik.uni-dortmund.de:25945)
2: In for (i in seq_len(nrow(theme))) { :
closing unused connection 5 (<-CRANwin3.fb05.statistik.uni-dortmund.de:25945)
Execution halted
Flavor: r-devel-windows-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [29m/43m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(proteus)
>
> test_check("proteus")
block 1
581 sequence for training
561 sequence for testing
epoch: 3 Train loss: 0.3199766 Test loss: 0.3303073
epoch: 6 Train loss: 0.3283107 Test loss: 0.3326725
epoch: 9 Train loss: 0.3332206 Test loss: 0.3351827
epoch: 12 Train loss: 0.330341 Test loss: 0.3314894
epoch: 15 Train loss: 0.3341951 Test loss: 0.3340576
epoch: 18 Train loss: 0.3234637 Test loss: 0.3308683
epoch: 21 Train loss: 0.3330943 Test loss: 0.3266735
early stop at epoch: 23 Train loss: 0.361669 Test loss: 0.3329948
block 2
1142 sequence for training
561 sequence for testing
epoch: 3 Train loss: 0.3348371 Test loss: 0.3330842
epoch: 6 Train loss: 0.328921 Test loss: 0.3341379
epoch: 9 Train loss: 0.3306004 Test loss: 0.3277192
epoch: 12 Train loss: 0.3403678 Test loss: 0.3347638
early stop at epoch: 13 Train loss: 0.2544201 Test loss: 0.3178135
final training on all 3
1703 sequence for training
epoch: 3 Train loss: 0.33419
epoch: 6 Train loss: 0.3344037
epoch: 9 Train loss: 0.3277188
epoch: 12 Train loss: 0.3307849
epoch: 15 Train loss: 0.3321109
epoch: 18 Train loss: 0.3288007
epoch: 21 Train loss: 0.3293982
epoch: 24 Train loss: 0.3310115
epoch: 27 Train loss: 0.3331793
epoch: 30 Train loss: 0.3361465
variational model based on normal latent distribution with 144 tensors and 8190 parameters
proteus: 857.912 sec elapsed
date and value gaps filled with kalman imputation
block 1
801 sequence for training
801 sequence for testing
epoch: 3 Train loss: 0.3267026 Test loss: 0.3296768
epoch: 6 Train loss: 0.329943 Test loss: 0.3291276
epoch: 9 Train loss: 0.3274457 Test loss: 0.3287133
epoch: 12 Train loss: 0.3279254 Test loss: 0.3295515
epoch: 15 Train loss: 0.326198 Test loss: 0.3271685
epoch: 18 Train loss: 0.327614 Test loss: 0.3306258
early stop at epoch: 18 Train loss: 0.3392735 Test loss: 0.3171166
block 2
1602 sequence for training
801 sequence for testing
epoch: 3 Train loss: 0.3227517 Test loss: 0.3285946
epoch: 6 Train loss: 0.3218644 Test loss: 0.3298174
epoch: 9 Train loss: 0.3238878 Test loss: 0.3305683
epoch: 12 Train loss: 0.3223115 Test loss: 0.3277066
early stop at epoch: 14 Train loss: 0.3319073 Test loss: 0.3299995
final training on all 3
2403 sequence for training
epoch: 3 Train loss: 0.3306837
epoch: 6 Train loss: 0.3286098
epoch: 9 Train loss: 0.3302987
epoch: 12 Train loss: 0.3308404
epoch: 15 Train loss: 0.3316363
epoch: 18 Train loss: 0.3305579
epoch: 21 Train loss: 0.3296561
epoch: 24 Train loss: 0.3288558
epoch: 27 Train loss: 0.3285954
epoch: 30 Train loss: 0.3292858
variational model based on normal latent distribution with 144 tensors and 60670 parameters
proteus: 1706.05 sec elapsed
[ FAIL 1 | WARN 13747 | SKIP 0 | PASS 24 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-main.R:44:13'): Correct outcome format and size for base outcome3 ──
Error: 'workers >= 1' is not TRUE
Backtrace:
▆
1. └─proteus::proteus_random_search(...) at test-main.R:44:13
2. └─future::plan(...)
3. └─future (local) plan_set(newStack, skip = .skip, cleanup = .cleanup, init = .init)
4. └─future (local) plan_init()
5. └─future (local) evaluator(NA, label = "future-plan-test", globals = FALSE, lazy = FALSE)
6. └─future (local) strategy(..., workers = workers, envir = envir)
7. └─future:::stop_if_not(...)
8. └─future:::stopf(...)
[ FAIL 1 | WARN 13747 | SKIP 0 | PASS 24 ]
Error: Test failures
Execution halted
Flavor: r-patched-linux-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [28m/42m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(proteus)
>
> test_check("proteus")
block 1
581 sequence for training
561 sequence for testing
epoch: 3 Train loss: 0.3228286 Test loss: 0.3299024
epoch: 6 Train loss: 0.3295888 Test loss: 0.3333441
epoch: 9 Train loss: 0.3322762 Test loss: 0.336259
epoch: 12 Train loss: 0.3336286 Test loss: 0.3313032
epoch: 15 Train loss: 0.3348622 Test loss: 0.3349924
epoch: 18 Train loss: 0.3279072 Test loss: 0.3317899
epoch: 21 Train loss: 0.3362914 Test loss: 0.3256471
early stop at epoch: 23 Train loss: 0.3616701 Test loss: 0.3296552
block 2
1142 sequence for training
561 sequence for testing
epoch: 3 Train loss: 0.3334067 Test loss: 0.332717
epoch: 6 Train loss: 0.3246992 Test loss: 0.3336211
epoch: 9 Train loss: 0.3266206 Test loss: 0.3269263
epoch: 12 Train loss: 0.337995 Test loss: 0.3351788
early stop at epoch: 12 Train loss: 0.4641145 Test loss: 0.3343987
final training on all 3
1703 sequence for training
epoch: 3 Train loss: 0.33419
epoch: 6 Train loss: 0.3344037
epoch: 9 Train loss: 0.3277188
epoch: 12 Train loss: 0.3307849
epoch: 15 Train loss: 0.3321109
epoch: 18 Train loss: 0.3288007
epoch: 21 Train loss: 0.3293982
epoch: 24 Train loss: 0.3310115
epoch: 27 Train loss: 0.3331793
epoch: 30 Train loss: 0.3361465
variational model based on normal latent distribution with 144 tensors and 8190 parameters
proteus: 824.72 sec elapsed
date and value gaps filled with kalman imputation
block 1
801 sequence for training
801 sequence for testing
epoch: 3 Train loss: 0.3257426 Test loss: 0.3279094
epoch: 6 Train loss: 0.3260519 Test loss: 0.3267367
epoch: 9 Train loss: 0.325309 Test loss: 0.3263512
early stop at epoch: 10 Train loss: 0.3386835 Test loss: 0.3214455
block 2
1602 sequence for training
801 sequence for testing
epoch: 3 Train loss: 0.3265884 Test loss: 0.3296479
epoch: 6 Train loss: 0.3260211 Test loss: 0.3305092
epoch: 9 Train loss: 0.3282239 Test loss: 0.3324106
epoch: 12 Train loss: 0.328125 Test loss: 0.3286998
early stop at epoch: 14 Train loss: 0.3325073 Test loss: 0.337071
final training on all 3
2403 sequence for training
epoch: 3 Train loss: 0.3306837
epoch: 6 Train loss: 0.3286098
epoch: 9 Train loss: 0.3302987
epoch: 12 Train loss: 0.3308404
epoch: 15 Train loss: 0.3316363
epoch: 18 Train loss: 0.3305579
epoch: 21 Train loss: 0.3296561
epoch: 24 Train loss: 0.3288558
epoch: 27 Train loss: 0.3285954
epoch: 30 Train loss: 0.3292858
variational model based on normal latent distribution with 144 tensors and 60670 parameters
proteus: 1660.257 sec elapsed
[ FAIL 1 | WARN 13747 | SKIP 0 | PASS 24 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-main.R:44:13'): Correct outcome format and size for base outcome3 ──
Error: 'workers >= 1' is not TRUE
Backtrace:
▆
1. └─proteus::proteus_random_search(...) at test-main.R:44:13
2. └─future::plan(...)
3. └─future (local) plan_set(newStack, skip = .skip, cleanup = .cleanup, init = .init)
4. └─future (local) plan_init()
5. └─future (local) evaluator(NA, label = "future-plan-test", globals = FALSE, lazy = FALSE)
6. └─future (local) strategy(..., workers = workers, envir = envir)
7. └─future:::stop_if_not(...)
8. └─future:::stopf(...)
[ FAIL 1 | WARN 13747 | SKIP 0 | PASS 24 ]
Error: Test failures
Execution halted
Flavor: r-release-linux-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running 'testthat.R' [22m]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(proteus)
>
> test_check("proteus")
OMP: Warning #96: Cannot form a team with 48 threads, using 2 instead.
OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set).
OMP: Warning #96: Cannot form a team with 48 threads, using 2 instead.
OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set).
block 1
581 sequence for training
561 sequence for testing
epoch: 3 Train loss: 0.3204455 Test loss: 0.3298009
epoch: 6 Train loss: 0.3280994 Test loss: 0.3320741
epoch: 9 Train loss: 0.3324229 Test loss: 0.336558
epoch: 12 Train loss: 0.3320995 Test loss: 0.3313232
epoch: 15 Train loss: 0.3359185 Test loss: 0.3342206
epoch: 18 Train loss: 0.3255125 Test loss: 0.3316526
epoch: 21 Train loss: 0.33374 Test loss: 0.3252327
early stop at epoch: 23 Train loss: 0.3616712 Test loss: 0.3282766
block 2
1142 sequence for training
561 sequence for testing
epoch: 3 Train loss: 0.332855 Test loss: 0.3313626
epoch: 6 Train loss: 0.3249635 Test loss: 0.332448
epoch: 9 Train loss: 0.324772 Test loss: 0.3268639
epoch: 12 Train loss: 0.3383495 Test loss: 0.3347559
early stop at epoch: 12 Train loss: 0.4641146 Test loss: 0.3344065
final training on all 3
1703 sequence for training
OMP: Warning #96: Cannot form a team with 48 threads, using 2 instead.
OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set).
epoch: 3 Train loss: 0.3341906
epoch: 6 Train loss: 0.3344024
epoch: 9 Train loss: 0.3277184
epoch: 12 Train loss: 0.330829
epoch: 15 Train loss: 0.3321107
epoch: 18 Train loss: 0.3288029
epoch: 21 Train loss: 0.3293988
epoch: 24 Train loss: 0.3310117
epoch: 27 Train loss: 0.3331798
epoch: 30 Train loss: 0.3361483
variational model based on normal latent distribution with 144 tensors and 8190 parameters
proteus: 457.86 sec elapsed
date and value gaps filled with kalman imputation
OMP: Warning #96: Cannot form a team with 48 threads, using 2 instead.
OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set).
OMP: Warning #96: Cannot form a team with 48 threads, using 2 instead.
OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set).
block 1
801 sequence for training
801 sequence for testing
epoch: 3 Train loss: 0.3168605 Test loss: 0.3220224
epoch: 6 Train loss: 0.3184525 Test loss: 0.3218435
epoch: 9 Train loss: 0.3165503 Test loss: 0.3207582
epoch: 12 Train loss: 0.3170878 Test loss: 0.3228463
epoch: 15 Train loss: 0.3159468 Test loss: 0.3191096
epoch: 18 Train loss: 0.3166486 Test loss: 0.3231742
epoch: 21 Train loss: 0.3176271 Test loss: 0.3209094
epoch: 24 Train loss: 0.3173968 Test loss: 0.3217795
epoch: 27 Train loss: 0.3161695 Test loss: 0.3229997
epoch: 30 Train loss: 0.3182184 Test loss: 0.3184829
block 2
1602 sequence for training
801 sequence for testing
epoch: 3 Train loss: 0.3283991 Test loss: 0.330901
epoch: 6 Train loss: 0.3270862 Test loss: 0.3311992
epoch: 9 Train loss: 0.330576 Test loss: 0.3324641
epoch: 12 Train loss: 0.3291055 Test loss: 0.3302877
early stop at epoch: 14 Train loss: 0.3240392 Test loss: 0.3354642
final training on all 3
2403 sequence for training
epoch: 3 Train loss: 0.3306856
epoch: 6 Train loss: 0.3286107
epoch: 9 Train loss: 0.3302989
epoch: 12 Train loss: 0.3308403
epoch: 15 Train loss: 0.3316448
epoch: 18 Train loss: 0.3305569
epoch: 21 Train loss: 0.3296555
epoch: 24 Train loss: 0.3288527
epoch: 27 Train loss: 0.3285952
epoch: 30 Train loss: 0.3292743
variational model based on normal latent distribution with 144 tensors and 60670 parameters
proteus: 828.02 sec elapsed
[ FAIL 1 | WARN 13747 | SKIP 0 | PASS 24 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-main.R:44:13'): Correct outcome format and size for base outcome3 ──
Error: 'workers >= 1' is not TRUE
Backtrace:
▆
1. └─proteus::proteus_random_search(...) at test-main.R:44:13
2. └─future::plan(...)
3. └─future (local) plan_set(newStack, skip = .skip, cleanup = .cleanup, init = .init)
4. └─future (local) plan_init()
5. └─future (local) evaluator(NA, label = "future-plan-test", globals = FALSE, lazy = FALSE)
6. └─future (local) strategy(..., workers = workers, envir = envir)
7. └─future:::stop_if_not(...)
8. └─future:::stopf(...)
[ FAIL 1 | WARN 13747 | SKIP 0 | PASS 24 ]
Error: Test failures
In addition: Warning messages:
1: closing unused connection 6 (<-CRANwin3.fb05.statistik.uni-dortmund.de:32740)
2: closing unused connection 5 (<-CRANwin3.fb05.statistik.uni-dortmund.de:32740)
Execution halted
Flavor: r-release-windows-x86_64
Version: 1.1.4
Check: tests
Result: FAIL
Check process probably crashed or hung up for 20 minutes ... killed
Most likely this happened in the example checks (?),
if not, ignore the following last lines of example output:
======== End of example output (where/before crash/hang up occured ?) ========
Flavor: r-oldrel-windows-x86_64