Last updated on 2025-08-05 18:55:42 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.3.0 | 51.27 | 432.81 | 484.08 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.3.0 | 38.95 | 310.74 | 349.69 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.3.0 | 765.69 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.3.0 | 749.59 | OK | |||
| r-devel-windows-x86_64 | 1.3.0 | 53.00 | 402.00 | 455.00 | OK | |
| r-patched-linux-x86_64 | 1.3.0 | 49.26 | 412.01 | 461.27 | OK | |
| r-release-linux-x86_64 | 1.3.0 | 52.75 | 415.76 | 468.51 | OK | |
| r-release-macos-arm64 | 1.3.0 | 201.00 | OK | |||
| r-release-macos-x86_64 | 1.3.0 | 361.00 | OK | |||
| r-release-windows-x86_64 | 1.3.0 | 50.00 | 0.00 | 50.00 | FAIL | |
| r-oldrel-macos-arm64 | 1.3.0 | 205.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.3.0 | 312.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.3.0 | 71.00 | 522.00 | 593.00 | OK |
Version: 1.3.0
Check: re-building of vignette outputs
Result: FAIL
Check process probably crashed or hung up for 20 minutes ... killed
Most likely this happened in the example checks (?),
if not, ignore the following last lines of example output:
> db <- subset(ExampleDb, c_call == "IGHG")
>
> # Find clonal groups
> results <- spectralClones(db, method="novj", germline="germline_alignment_d_mask")
Running defineClonesScoper in bulk mode and only keep heavy chains
>
> # Retrieve modified input data with clonal clustering identifiers
> df <- as.data.frame(results)
>
> # Plot clonal summaries
> plot(results, binwidth=0.02)
>
>
>
>
> ### * <FOOTER>
> ###
> cleanEx()
> options(digits = 7L)
> base::cat("Time elapsed: ", proc.time() - base::get("ptime", pos = 'CheckExEnv'),"\n")
Time elapsed: 21.72 1.19 22.94 NA NA
> grDevices::dev.off()
null device
1
> ###
> ### Local variables: ***
> ### mode: outline-minor ***
> ### outline-regexp: "\\(> \\)?### [*]+" ***
> ### End: ***
> quit('no')
======== End of example output (where/before crash/hang up occured ?) ========
Flavor: r-release-windows-x86_64