BOLDconnectR 1.0.1
New features
- Added a new BOLDconnectR workflow vignette.
- Updated
bold.analyze.tree to include the
ape::DNAbin object in the returned results.
- Added a Barcode Core Data Model (BCDM) test data set named
test.data2
Improvements
- Improved error messages in
bold.public.search,
including clearer handling of the 1M-record limit.
- Enhanced
tryCatch handling across all steps in
bold.public.search.
- Optimized
bold.fetch by ensuring
bold.bcdm.fields is called only once per run.
- Replaced
dcast() with pivot_wider() in
gen.comm.mat.
- Reformatted code using
styler.
Bug fixes
- Added support for the
taxon.name argument in
bold.analyze.diversity.
- Added error handling for empty data frames in
bold.analyze.diversity.
- Updated the start and end date error message in
bold.full.search
- Fixed sequence alignment output conversion to improve compatibility
with updated Bioconductor packages.
Miscellaneous
- Updated author list.
- Introduced
NEWS.md to document versioned package
changes.