CMplot: Circle Manhattan Plot

Manhattan plot, a type of scatter plot, was widely used to display the association results. However, it is usually time-consuming and laborious for a non-specialist user to write scripts and adjust parameters of an elaborate plot. Moreover, the ever-growing traits measured have necessitated the integration of results from different Genome-wide association study researches. Circle Manhattan Plot is the first open R package that can lay out. Genome-wide association study P-value results in both traditional rectangular patterns, QQ-plot and novel circular ones. United in only one bull's eye style plot, association results from multiple traits can be compared interactively, thereby to reveal both similarities and differences between signals. Additional functions include: highlight signals, a group of SNPs, chromosome visualization and candidate genes around SNPs.

Version:	4.5.1
Depends:	R (≥ 2.10)
Published:	2024-01-19
DOI:	10.32614/CRAN.package.CMplot
Author:	LiLin-Yin
Maintainer:	LiLin-Yin <ylilin at 163.com>
BugReports:	https://github.com/YinLiLin/CMplot/issues/new
License:	GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL:	https://github.com/YinLiLin/CMplot
NeedsCompilation:	no
CRAN checks:	CMplot results

Documentation:

Reference manual:

CMplot.pdf

Downloads:

Package source:	CMplot_4.5.1.tar.gz
Windows binaries:	r-devel: CMplot_4.5.1.zip, r-release: CMplot_4.5.1.zip, r-oldrel: CMplot_4.5.1.zip
macOS binaries:	r-release (arm64): CMplot_4.5.1.tgz, r-oldrel (arm64): CMplot_4.5.1.tgz, r-release (x86_64): CMplot_4.5.1.tgz, r-oldrel (x86_64): CMplot_4.5.1.tgz
Old sources:	CMplot archive

Reverse dependencies:

Reverse imports:

BioM2, hibayes

Linking:

Please use the canonical form https://CRAN.R-project.org/package=CMplot to link to this page.