PhySortR: A Fast, Flexible Tool for Sorting Phylogenetic Trees

Screens and sorts phylogenetic trees in both traditional and extended Newick format. Allows for the fast and flexible screening (within a tree) of Exclusive clades that comprise only the target taxa and/or Non- Exclusive clades that includes a defined portion of non-target taxa.

Version:	1.0.8
Depends:	R (≥ 3.0.0)
Imports:	phytools, ape
Published:	2018-08-06
DOI:	10.32614/CRAN.package.PhySortR
Author:	Timothy Stephens [aut, cre, trl] (R port), Debashish Bhattacharya [aut], Mark Ragan [aut], Cheong Xin Chan [aut, cph] (Original Perl implementation)
Maintainer:	Timothy Stephens <timothy.stephens1 at uqconnect.edu.au>
License:	GPL (≥ 3)
NeedsCompilation:	no
CRAN checks:	PhySortR results

Documentation:

Reference manual:

PhySortR.pdf

Downloads:

Package source:	PhySortR_1.0.8.tar.gz
Windows binaries:	r-devel: PhySortR_1.0.8.zip, r-release: PhySortR_1.0.8.zip, r-oldrel: PhySortR_1.0.8.zip
macOS binaries:	r-release (arm64): PhySortR_1.0.8.tgz, r-oldrel (arm64): PhySortR_1.0.8.tgz, r-release (x86_64): PhySortR_1.0.8.tgz, r-oldrel (x86_64): PhySortR_1.0.8.tgz
Old sources:	PhySortR archive

Linking:

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