The eemR package implements various functions used calculate metrics from excitation-emission matrix (EEM) as well as to preform pre-processing corrections before PARAFAC analysis.
The latest release of the package from CRAN can be installed with:
install.packages("eemR")The latest development version of the package can be installed with:
devtools::install_github("PMassicotte/eemR")A detailed vignette presenting the package which can be viewed using:
vignette(topic = "introduction", package = "eemR")At the moment, EEMs generated by the following spectrofluorometer are officially supported.
Cary Eclipse .csv files
Aqualog .dat files
Shimadzu .TXT files
Fluoromax-4 .dat files
Hitachi F-7000 FL .TXT files
EEM can be read using the eem_read() function. Please
fill an issue
if you have other file formats you would like to add to the package. You
can also write your own import
function!