fundiversity 1.1.0
Minor changes
- Change vignette names and indexing so that they are ordered
similarly on the pkgdown website, on CRAN, and using
vignette. Vignettes are renamed
fundiversity_X-topic.Rmd but the overview vignette
fundiversity.Rmd.
- Fully replace all URLs still pointing to
https://github.com/bisaloo/fundiversity to
https://github.com/funecology/fundiversity
- Update documentation of
fd_*() functions for edge cases
and arguments.
- Fix unuseful argument in
remove_species_without_traits() that would display
FALSE at the end of each message.
- Update parallel vignette with list of parallelizable function at the
top and explain that vignette is pre-computed.
- Update performance/benchmark vignette to reflect actually ran
benchmark in manuscript.
Bug fixes
- Fix a bug in the computation of
fd_fdis() because of a
misplaced square. NB: All FDis computation done with it
to this day were wrong.
fundiversity 1.0.0
Internal changes
- Unit tests for non-continuous traits for all functions.
- Correct all URLs of the package
Minor changes
- fundiversity functions now error when used with non-continuous trait
data
future_apply() and future_lapply() calls
in fd_fdis(), fd_fdiv(),
fd_ric(), fd_fric_intersect() and
fd_feve() now use future.globals = FALSE, thus
making the internal code less error-prone and faster in parallel
settings.
Major changes
- Add a vignette on numerical correctness named
correctness, accessible with
vignette("correctness", package = "fundiversity").
fundiversity 0.2.1
Internal changes
- Unit tests have been updated to work with testthat 3.1.0
fundiversity 0.2.0
Major changes
- There is a new function
fd_fric_intersect() to compute
the intersection of convex hulls across pairs of sites.
- There is a new function
fd_fdis to compute Functional
Dispersion FDis.
fd_fdiv(), fd_feve(),
fd_fdis(), fd_fric() can now be computed in
parallel with the future framework.
Please refer to the parallelization
vignette for more information.- The convex hull computation in
fd_fdiv(),
fd_fric(), and fd_fric_intersect() is now
cached thanks to the memoise
package to speed up repeated runs. This behavior can be disabled by
running options(fundiversity.memoise = FALSE) at the start
of your R session.
fundiversity 0.0.1
- First CRAN release (01751f1) :tada:!
- Added a
NEWS.md file to track changes to the
package.