Customizing your site

If you want to customize your site, you can do so by editing _quartodown/_quartodown.yml, which quartodown::use_quartodown() creates. The _quartodown/ folder at the package root also holds the files that style the site. _quartodown.yml has nine fields, all optional:

• url: is the site’s address, if it isn’t the first URL in DESCRIPTION that isn’t on GitHub, GitLab or Codeberg.
• reference: groups and orders the function reference index.
• navbar: lays out the navbar.
• home: picks the home page’s source and lays out its sidebar.
• authors: links authors’ names and picks who is shown where.
• repo: says where the source code is, if DESCRIPTION doesn’t.
• theme: picks the light and dark themes.
• redirects: sends visitors from old addresses to new ones.
• quarto: changes any other Quarto setting.

The reference index

Without reference:, the index lists every function in one section. To group them, list the sections:

reference:
1  - title: Read and write
2    desc: Functions for getting data in and out.
    contents:
3      - read_data
4      - starts_with("write_")
  - title: Helpers
5    subtitle: Low-level
    contents:
      - has_concept("helpers")
6      - -internal_helper

1

Each entry becomes a section of the index, with this heading.

2

Optional Markdown text, shown under the heading.

3

A topic, by any of its \alias{} names or its Rd file name.

4

A selector.

5

An optional heading one level below title.

6

A leading - removes a topic.

The selectors are:

Topics that no section lists get a warning and are left off the index. The exception is \keyword{internal} topics, which are left out, without a page, unless named, as with roxygen’s reexports, or selected with internal = TRUE, as in starts_with("dev_", internal = TRUE).

The format is the same as pkgdown’s reference: field, so an existing one can be copied over.

The navbar

navbar: lists the items on the navbar’s left and right, in order. The default is:

navbar:
  left: [intro, reference, articles, news]
  right: [repo]

Each of these is a keyword that quartodown turns into an item, and leaves out if the package has nothing for it:

Any other item is a vignette, given as its path relative to vignettes/ without extension and linked with its title, or a Quarto navbar item. Inside a Quarto item’s menu:, vignettes are given the same way, and a folder ending in / lists every vignette in it.

For example, with the vignettes in a folder for each menu:

navbar:
  left:
    - reference
    - news
    - text: Get started
      menu:
1        - get-started/installation
        - get-started/first-steps
    - text: User guide
2      menu: user-guide/
    - text: Developers
      menu:
        - dev/internals
3        - text: Contributing
          href: CONTRIBUTING.md
  right:
    - text: Blog
      href: https://example.com/blog
    - repo

1

vignettes/get-started/installation.qmd.

2

Every vignette in vignettes/user-guide/, sorted by file name.

3

Any Quarto navbar item works in a menu too.

Vignettes can live in any subfolder of vignettes/. Files and folders whose name starts with _ or . are skipped, as Quarto does.

Every vignette is built, even one the navbar doesn’t link to. Such a vignette can only be reached through links from other pages, so build_site() warns about it, unless the navbar has articles, which lists every vignette nothing else links.

A sidebar instead

With style: sidebar, the left items move into a sidebar beside every page, and the navbar keeps the site’s title, the search box and the right items:

navbar:
  style: sidebar

Menus become sections of the sidebar, and “Reference” lists every reference page by function name, with a section for each titled group of reference:.

The home page

The home page shows README.md, or, if there is none, the package’s description from DESCRIPTION. To give the site a different home page than the README, use home: file: at another file, relative to the package root:

home:
  file: index.qmd

It can be Markdown (.md) or a Quarto document (.qmd), whose code runs when the site is built, as in a vignette. Write links and image paths in it relative to the package root, as in the README.

Next to the page, a sidebar shows the package’s links, license, community files, citation, authors and badges. sidebar: can reorder its sections, drop some, or add your own, and links: adds to its links:

home:
  links:
    - text: Blog
      href: https://example.com/blog
  sidebar:
1    structure: [links, funding, license, authors]
    components:
2      funding:
        title: Funding
        text: Supported by [a grant](https://example.com).

1

The sections, in order. The built-in ones are links, license, community, citation, authors and dev (the README’s badges); by default, all of them in that order, then your own.

2

A section of your own: a heading and Markdown text.

For full control over the page you can turn the sidebar off with sidebar: false:

home:
  file: index.qmd
  sidebar: false

The page then shows the file as written. Like any other page, it then gets a table of contents, which toc: false in its front matter can turn off.

Authors

The home page’s sidebar and the footer list the authors with the roles aut, cre and fnd from DESCRIPTION’s Authors@R, and the authors page lists everyone. authors: can link a person’s name, or replace it with HTML such as a logo, and change who is shown:

authors:
1  Jane Doe:
    href: https://jane.example.com
  Acme Inc:
    href: https://acme.example.com
    html: <img src="https://acme.example.com/logo.png" alt="Acme" height="24">
  sidebar:
2    roles: [aut, cre]
3    after: Thanks to all [contributors](authors.html).
  footer:
    roles: [cre]
4    text: Maintained by

1

A person, by their name as in Authors@R.

2

The roles shown in the sidebar.

3

Markdown shown under the sidebar’s list, or with before: above it.

4

Instead of “Developed by”.

The format is the same as pkgdown’s authors:.

The repository

Source links (the “Source:” line under each page’s title), the sidebar’s “Browse source code”, the navbar’s repository icon and the changelog’s #123 and @user links all come from the first GitHub, GitLab (including self-hosted, if its host name has gitlab in it) or Codeberg URL in DESCRIPTION. For a package in a folder of a repository, give the URL of the folder, with its branch, as in https://github.com/me/repo/tree/main/mypkg.

repo: sets them where that isn’t enough, such as for another host or branch:

repo:
  url:
1    home: https://git.sr.ht/~me/mypkg
2    source: https://git.sr.ht/~me/mypkg/tree/main/item/
3    issue: https://todo.sr.ht/~me/mypkg/
4    user: https://sr.ht/~
5  branch: devel

1

The repository’s page.

2

Prefix of a file’s link, such as R/foo.R.

3

Prefix of an issue’s link, such as 123.

4

Prefix of a user’s link.

5

The branch the source links point to, instead of the default branch. Ignored when source: is set.

Each is optional and replaces only its own link. The format is the same as pkgdown’s repo:.

Redirects

When a page moves, such as a function’s reference page after it is renamed you can use redirects: so links to the old address keeps working. Each entry is a pair: the old address and the new one, both relative to the site’s root:

redirects:
  - ["reference/foo.bar.html", "reference/foo_bar.html"]
  - ["articles/old-guide.html", "vignettes/guide.html"]

For a vignette, Quarto’s own aliases: in its front matter does the same.

Other Quarto settings

quartodown writes a Quarto configuration into _quarto/_quarto.yml (overwritten on every build). The quarto: field is merged over it, key by key:

• A list of entries, such as website: navbar: left:, is added to.
• Any other value is replaced.
• ~ removes a setting.

For example, to fold code blocks, drop the table of contents and change the footer:

quarto:
  format:
    html:
      code-fold: true
      toc: ~
  website:
    page-footer:
      right: "Built with love."

See the Quarto website reference for the full list of changes you can make.

quarto: applies to every page. To change a single vignette instead, set the option in its front matter, which overrides the site-wide value:

---
title: "A long tutorial"
format:
  html:
    code-fold: true
    toc-depth: 3
---

To change a single code chunk, use a chunk option such as #| code-fold: true.

Styling and layout

The site uses Quarto’s default theme in light mode and darkly in dark mode. theme: picks others from Quarto’s built-in themes (the Bootswatch themes, as in pkgdown’s template: bootswatch:), with quartodown’s styling on top:

theme:
  light: flatly
  dark: darkly

Either can be left out to keep its default. A theme can also be your own .scss file in _quartodown/, such as light: _quartodown/brand.scss. To adjust a built-in theme you can use extra.scss, an example is given below.

To restyle every page, add _quartodown/extra.scss. It is compiled on top of quartodown’s theme, once for the light theme and once for the dark one, and has two parts: Bootstrap and Quarto variables under scss:defaults, and CSS rules under scss:rules:

/*-- scss:defaults --*/
1$primary: #2c7a7b;
$font-family-sans-serif: "Inter", sans-serif;

/*-- scss:rules --*/
.navbar {
2  border-bottom: 1px solid $border-color;
}

1

Links, the active navbar item and buttons.

2

Variables take the value of the theme being compiled, so this suits both.

Plain CSS can go in _quartodown/extra.css instead, which is added to every page as it is.

The page’s widths and spacing are Quarto settings, under quarto:. For example, a wider text column and table of contents:

quarto:
  format:
    html:
      grid:
        body-width: 900px
        margin-width: 300px

See Quarto’s page layout guide for grid: and page-layout:.

The navbar’s items start where the page’s text does, which a script on each page measures. To start them at the edge of the page instead, override it with:

/*-- scss:rules --*/
.navbar-container {
  padding-left: 1em !important;
}

Everything in _quartodown/ is copied into the Quarto project, so other files it holds can be named from quarto: by the same path, such as Quarto template partials:

quarto:
  format:
    html:
      template-partials:
        - _quartodown/title-block.html

Setting include-in-header: or include-after-body: replaces quartodown’s own files, which, among other things, pick dark mode for visitors who prefer it and line up the navbar. To add to them, list them too:

quarto:
  format:
    html:
      include-in-header:
        - quartodown-header.html
        - _quartodown/analytics.html

Coming from pkgdown

Moving a site over is very easy, and mostly means moving _pkgdown.yml’s settings into _quartodown/_quartodown.yml. These have the same format, so can be copied as is: url:, reference:, home: sidebar:, home: links:, authors:, repo: and redirects:. The rest maps as follows:

A separate home page (an index.md used instead of the README) isn’t picked up automatically: set it with home: file:. Code that checks IN_PKGDOWN (or pkgdown::in_pkgdown()) should check identical(Sys.getenv("IN_QUARTODOWN"), "true") instead.

For example, this part of a _pkgdown.yml:

template:
  bootswatch: flatly
  bslib:
    base_font: {google: "Inter"}
    code_font: {google: "Fira Code"}
  opengraph:
    twitter:
      creator: "@me"
      card: summary_large_image
home:
  title: "mypkg: Do Things"
  description: A package that does things.

becomes, in _quartodown/_quartodown.yml:

theme:
  light: flatly
quarto:
  website:
    description: A package that does things.
    twitter-card:
      creator: "@me"
      card-style: summary_large_image

and, in _quartodown/extra.scss:

/*-- scss:defaults --*/
@import url("https://fonts.googleapis.com/css2?family=Inter&family=Fira+Code&display=swap");
$font-family-sans-serif: "Inter", sans-serif;
$font-family-monospace: "Fira Code", monospace;

A custom navbar item, such as a link to CRAN, is a Quarto navbar item:

navbar:
  right:
    - repo
    - text: CRAN
      href: https://cran.r-project.org/package=mypkg

The rest works as with pkgdown, except that vignettes are published under vignettes/ rather than articles/: articles/foo.html becomes vignettes/foo.html, and articles/bar.html, from vignettes/articles/bar.Rmd, becomes vignettes/articles/bar.html. Likewise, the changelog is NEWS.html rather than news/index.html. Update links to them, or keep the old addresses working with redirects:.

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