A collection of high performance utilities to compute distance, correlation, auto correlation, clustering and other tasks. Contains graph clustering algorithm described in "MetaCell: analysis of single-cell RNA-seq data using K-nn graph partitions" (Yael Baran, Akhiad Bercovich, Arnau Sebe-Pedros, Yaniv Lubling, Amir Giladi, Elad Chomsky, Zohar Meir, Michael Hoichman, Aviezer Lifshitz & Amos Tanay, 2019 <doi:10.1186/s13059-019-1812-2>).
| Version: | 2.3.28 |
| Depends: | R (≥ 3.5.0) |
| Imports: | utils |
| Suggests: | knitr, rmarkdown, testthat (≥ 3.0.0) |
| OS_type: | unix |
| Published: | 2024-09-23 |
| DOI: | 10.32614/CRAN.package.tgstat |
| Author: | Michael Hoichman [aut], Aviezer Lifshitz [aut, cre] |
| Maintainer: | Aviezer Lifshitz <aviezer.lifshitz at weizmann.ac.il> |
| BugReports: | https://github.com/tanaylab/tgstat/issues |
| License: | GPL-2 |
| URL: | https://tanaylab.github.io/tgstat/ |
| NeedsCompilation: | yes |
| Materials: | NEWS |
| CRAN checks: | tgstat results |
| Reference manual: | tgstat.pdf |
| Vignettes: |
manual (source, R code) |
| Package source: | tgstat_2.3.28.tar.gz |
| Windows binaries: | r-devel: not available, r-release: not available, r-oldrel: not available |
| macOS binaries: | r-release (arm64): tgstat_2.3.28.tgz, r-oldrel (arm64): tgstat_2.3.28.tgz, r-release (x86_64): tgstat_2.3.28.tgz, r-oldrel (x86_64): tgstat_2.3.28.tgz |
| Old sources: | tgstat archive |
| Reverse imports: | tglkmeans |
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