An implementation of the time-series Susceptible-Infected-Recovered (TSIR) model using a number of different fitting options for infectious disease time series data. The manuscript based on this package can be found here <doi:10.1371/journal.pone.0185528>. The method implemented here is described by Finkenstadt and Grenfell (2000) <doi:10.1111/1467-9876.00187>.
| Version: | 0.4.3 |
| Depends: | R (≥ 3.1.0) |
| Imports: | ggplot2, kernlab, reshape2, grid |
| Published: | 2021-01-20 |
| DOI: | 10.32614/CRAN.package.tsiR |
| Author: | Alexander D. Becker [aut, cre], Sinead E. Morris [ctb], Ottar N. Bjornstad [ctb] |
| Maintainer: | Alexander D. Becker <adbecker at princeton.edu> |
| Contact: | adbecker at princeton dot edu |
| License: | GPL-3 |
| NeedsCompilation: | no |
| Materials: | README |
| In views: | Epidemiology |
| CRAN checks: | tsiR results |
| Reference manual: | tsiR.pdf |
| Package source: | tsiR_0.4.3.tar.gz |
| Windows binaries: | r-devel: tsiR_0.4.3.zip, r-release: tsiR_0.4.3.zip, r-oldrel: tsiR_0.4.3.zip |
| macOS binaries: | r-devel (arm64): tsiR_0.4.3.tgz, r-release (arm64): tsiR_0.4.3.tgz, r-oldrel (arm64): tsiR_0.4.3.tgz, r-devel (x86_64): tsiR_0.4.3.tgz, r-release (x86_64): tsiR_0.4.3.tgz, r-oldrel (x86_64): tsiR_0.4.3.tgz |
| Old sources: | tsiR archive |
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